Contig 003261:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022B07Sequence399003261 (2)ref|XP_009791697.1|1e-46PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Nicotiana sylvestris] re656018022ref|NP_001239043.1|2e-53ABA responsive transcription factor [Solanum lycopersicum] dbj|BAL04566.1| ABA r
JMFF042L13Sequence647003261 (2)ref|XP_004230778.1|6e-59PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Solanum lycopersicum]630024398gb|AJO70136.1|1e-53ABA responsive element binding factor [Nicotiana tabacum]

Alignment

This contig is upended


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JMFF042L13+                        ATTCCAAGAGCAGGACGCCTGCTTCCTGAGCTAGCCTGCTGAGGATT
                      ____________________________________________________________
consensus                          ATTCCAAGAGCAGGACGCCTGCTTCCTGAGCTAGCCTGCTGAGGATT
 
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JMFF042L13+           GTTTCCTAATTGCATTGGAGAGGCAAAGGCCAAGGTTGTCTGTTTAGGAAAAAGTGGTTG
                      ____________________________________________________________
consensus             GTTTCCTAATTGCATTGGAGAGGCAAAGGCCAAGGTTGTCTGTTTAGGAAAAAGTGGTTG
 
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JMFF042L13+           GTGAAGCTGAAGCTGTTGATGATGCTGCAAAGGTTGTTGCTGGGTAGATCTGGTGGCTCC
                      ____________________________________________________________
consensus             GTGAAGCTGAAGCTGTTGATGATGCTGCAAAGGTTGTTGCTGGGTAGATCTGGTGGCTCC
 
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JMFF042L13+           TGCACTAAGCATTGGATTAGATGCACCAGGAATGGCTGCAGCACTGTTATTATCTGTGAT
                      ____________________________________________________________
consensus             TGCACTAAGCATTGGATTAGATGCACCAGGAATGGCTGCAGCACTGTTATTATCTGTGAT
 
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JMFF022B07+                                TCCCATACTATTCAGCTGAGTCACACTGCTGCCAAATCC
JMFF042L13+           TTGTTTTCCTGGTTCTTGAAATCCCATACTATTCAGCTGAGTCACACTGCTGCCAAATCC
                      ____________________________________________________________
consensus             TTGTTTTCCTGGTTCTTGAAATCCCATACTATTCAGCTGAGTCACACTGCTGCCAAATCC
 
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JMFF022B07+           AACACTATTTGGAACCATTTCTTCTCTTACAACCCCTGCTTTGAACAAAAACTCTTCCAA
JMFF042L13+           AACACTATTTGGAACCATTTCTTCTCTTACAACCCCTGCTTTGAACAAAAACTCTTCCAA
                      ____________________________________________________________
consensus             AACACTATTTGGAACCATTTCTTCTCTTACAACCCCTGCTTTGAACAAAAACTCTTCCAA
 
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JMFF022B07+           TGTCATTTCCCCCAAAGTAGATTGTCTTTGGCCAAAGCTTGATCCACCATAGCCACAATC
JMFF042L13+           TGTCATTTCCCCCAAAGTAGATTGTCTTTGGCCAAAGCTTGATCCACCATAGCCACAATC
                      ____________________________________________________________
consensus             TGTCATTTCCCCCAAAGTAGATTGTCTTTGGCCAAAGCTTGATCCACCATAGCCACAATC
 
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JMFF022B07+           TTTGGTGGCACCAGTGTCTTTCTGAAAGTCTTTCCACACTTCATCCACAGTTTTCTGACT
JMFF042L13+           TTTGGTGGCACCAGTGTCTTTCTGAAAGTCTTTCCACACTTCATCCACAGTTTTCTGACT
                      ____________________________________________________________
consensus             TTTGGTGGCACCAGTGTCTTTCTGAAAGTCTTTCCACACTTCATCCACAGTTTTCTGACT
 
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JMFF022B07+           GAGCGTCCTGGGCAGCGTTAGAGAGCCTTGTCTCTGCAAGTTCCCACCAGGGACACTACC
JMFF042L13+           GAGCGTCCTGGGCAGCGTTAGAGAGCCTTGTCTCTGCAAGTTCCCACCAGGGACACTACC
                      ____________________________________________________________
consensus             GAGCGTCCTGGGCAGCGTTAGAGAGCCTTGTCTCTGCAAGTTCCCACCAGGGACACTACC
 
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JMFF022B07+           ATTATCTCCTGCACCAGCACAACATGCCTGGAACGGTTGAGATTCATCGGCAGTCCAAAT
JMFF042L13+           ATTATCTCCTGCACCAGCACAACATGCCTGGAACGGTTGAGATTCATCGGCAGTCCAAAT
                      ____________________________________________________________
consensus             ATTATCTCCTGCACCAGCACAACATGCCTGGAACGGTTGAGATTCATCGGCAGTCCAAAT
 
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JMFF022B07+           GCTCTTCAAAAGATCCTCCATATTCATAGACCCGAAATCCTTCCCAAGTCCACCAAATGT
JMFF042L13+           GCTCTTCAAAAGATCCTCCATATTCATAGACCCGAAATCCTTCCCAAGTCCACCAAATGT
                      ____________________________________________________________
consensus             GCTCTTCAAAAGATCCTCCATATTCATAGACCCGAAATCCTTCCCAAGTCCACCAAATGT