Contig 003240:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021D24Sequence465003240 (5)ref|XP_009344150.1|4e-07PREDICTED: glycine-rich protein A3-like [Pyrus x bretschneideri]660003240 (5)ref|XP_009050225.1|4e-06hypothetical protein LOTGIDRAFT_88250, partial [Lottia gigantea] gb|ESO99082.1|
JMFF028O01Sequence542003240 (5)ref|XP_009344150.1|5e-07PREDICTED: glycine-rich protein A3-like [Pyrus x bretschneideri]710003240 (5)ref|XP_009050225.1|3e-06hypothetical protein LOTGIDRAFT_88250, partial [Lottia gigantea] gb|ESO99082.1|
JMFF038C20Sequence180003240 (5)712021304

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF021D24- CATTGTGTAGGGGACAATTATGTATAGGACATTATT
rJMFF028O01- TAAATTCATAGAACACATTGTGTAGGGGACAATTATGTATAGGACATTATT
                      ____________________________________________________________
consensus TAAATTCATAGAACACATTGTGTAGGGGACAATTATGTATAGGACATTATT
 
. : . : . : . : . : . :
rJMFF021D24- ATCTCTACTACCACATAAGTTAAGACTAGTAATCTTAAATTGCAGTTTTTATGTAAATGG
rJMFF028O01- ATCTCTACTACCACATAAGTTAAGACTAGTAATCTTAAATTGCAGTTTTTATGTAAATGG
                      ____________________________________________________________
consensus ATCTCTACTACCACATAAGTTAAGACTAGTAATCTTAAATTGCAGTTTTTATGTAAATGG
 
. : . : . : . : . : . :
rJMFF021D24- TGTTGCAAACTTTATCACTTCCACTTCTTGAACTTCCCTCCATGCCCGTACATGCCATGC
rJMFF028O01- TGTTGCAAACTTTATCACTTCCACTTCTTGAACTTCCCTCCATGCCCGTACATGCCATGC
                      ____________________________________________________________
consensus TGTTGCAAACTTTATCACTTCCACTTCTTGAACTTCCCTCCATGCCCGTACATGCCATGC
 
. : . : . : . : . : . :
rJMFF021D24- TTCCCATGCTTGAACTTGCCATGCTTCCCGTGCTTGAACTTGCCATGACCATAATGACCG
rJMFF028O01- TTCCCATGCTTGAACTTGCCATGCTTCCCGTGCTTGAACTTGCCATGACCATAATGACCG
                      ____________________________________________________________
consensus TTCCCATGCTTGAACTTGCCATGCTTCCCGTGCTTGAACTTGCCATGACCATAATGACCG
 
. : . : . : . : . : . :
rJMFF021D24- CCATGACCATAATGACCACCATATCCGTAATGAGCAGCTCCGTGTGGCATGTGATGAGAA
rJMFF028O01- CCATGACCATAATGACCACCATATCCGTAATGAGCAGCTCCGTGTGGCATGTGATGAGAA
JMFF028O01+ CGTAATGAGCAGCTCCGTGTGGCATGTGATGAGAA
                      ____________________________________________________________
consensus CCATGACCATAATGACCACCATATCCGTAATGAGCAGCTCCGTGTGGCATGTGATGAGAA
 
. : . : . : . : . : . :
rJMFF021D24- GATCCATGTAACAAATGACTAGCACCATAACCAAGTGCCGCACCTGCAGCTCCTCCAGCT
rJMFF028O01- GATCCATGTAACAAATGACTAGCACCATAACCAAGTGCCGCACCTGCAGCTCCTCCAGCT
JMFF028O01+ GATCCATGTAACAAATGACTAGCACCATAACCAAGTGCCGCACCTGCAGCTCCTCCAGCT
                      ____________________________________________________________
consensus GATCCATGTAACAAATGACTAGCACCATAACCAAGTGCCGCACCTGCAGCTCCTCCAGCT
 
. : . : . : . : . : . :
rJMFF021D24- AACATTGACCCAATATTACCAGATCCATGTCCTGAATGAGATGGACTAGGATAAGCAGCT
rJMFF028O01- AACATTGACCCAATATTACCAGATCCATGTCCTGAATGAGATGGACTAGGATAAGCAGCT
JMFF028O01+ AACATTGACCCAATATTACCAGATCCATGTCCTGAATGAGATGGACTAGGATAAGCAGCT
JMFF021D24+ CCAGATCCATGTCCTGAATGAGATGGACTAGGATAAGCAGCT
                      ____________________________________________________________
consensus AACATTGACCCAATATTACCAGATCCATGTCCTGAATGAGATGGACTAGGATAAGCAGCT
 
. : . : . : . : . : . :
rJMFF021D24- GGTGAATGCCCTGGAGTGGGATACCCTTGTGGATATCCTTGGGGAGGATAACCTGCTGGT
rJMFF028O01- GGTGAATGCCCTGGAGTGGGATACCCTTGTGGATATCCTTGGGGAGGATAACCTGCTGGT
JMFF028O01+ GGTGAATGCCCTGGAGTGGGATACCCTTGTGGATATCCTTGGGGAGGATAACCTGCTGGT
JMFF021D24+ GGTGAATGCCCTGGAGTGGGATACCCTTGTGGATATCCTTGGGGAGGATAACCTGCTGGT
                      ____________________________________________________________
consensus GGTGAATGCCCTGGAGTGGGATACCCTTGTGGATATCCTTGGGGAGGATAACCTGCTGGT
 
. : . : . : . : . : . :
rJMFF021D24- GGATAGCCTTGAGAAGGATATGCCCCAGGTGGTGGAGGGTAAGACCCAGGTGGTGGAGGG
rJMFF028O01- GGATAGCCTTGAGAAGGATATGCCCCAGGTGGTGGAGGGTAAGACCCAGGTGGTGGAGGG
JMFF028O01+ GGATAGCCTTGAGAAGGATATGCCCCAGGTGGTGGAGGGTAAGACCCAGGTGGTGGAGGG
JMFF021D24+ GGATAGCCTTGAGAAGGATATGCCCCAGGTGGTGGAGGGTAAGACCCAGGTGGTGGAGGG
                      ____________________________________________________________
consensus GGATAGCCTTGAGAAGGATATGCCCCAGGTGGTGGAGGGTAAGACCCAGGTGGTGGAGGG
 
. : . : . : . : . : . :
rJMFF021D24- TAAGCCCCAGGCTGTGGAGGGTAAGCCCCATGTTGTGGGGGATAGGCTCCATGTTGTGGG
rJMFF028O01- TAAGCCCCAGGCTGTGGAGGGTAAGCCCCATGTTGTGGGGGATAGGCTCCATGTTGTGGG
JMFF028O01+ TAAGCCCCAGGCTGTGGAGGGTAAGCCCCATGTTGTGGGGGATAGGCTCCATGTTGTGGG
JMFF021D24+ TAAGCCCCAGGCTGTGGAGGGTAAGCCCCATGTTGTGGGGGATAGGCTCCATGTTGTGGG
                      ____________________________________________________________
consensus TAAGCCCCAGGCTGTGGAGGGTAAGCCCCATGTTGTGGGGGATAGGCTCCATGTTGTGGG
 
. : . : . : . : . : . :
rJMFF021D24- GGATAGGCCCCATGTTGTGGGGGATAGGCCCCATGTTGTGGAGGATACTGTCCAGAAACA
rJMFF028O01- GGATAGGCCCCATGTTGTGGGGGATAGGCCCCATGTTGTGGAGGATACTGTCCAGAAACA
JMFF028O01+ GGATAGGCCCCATGTTGTGGGGGATAGGCCCCATGTTGTGGAGGATACTGTCCAGAAACA
JMFF021D24+ GGATAGGCCCCATGTTGTGGGGGATAGGCCCCATGTTGTGGAGGATACTGTCCAGAAACA
                      ____________________________________________________________
consensus GGATAGGCCCCATGTTGTGGGGGATAGGCCCCATGTTGTGGAGGATACTGTCCAGAAACA
 
. : . : . : . : . : . :
rJMFF021D24- AAATTACCAAGTTGAGA
rJMFF028O01- AAATTACCAAGTTGAGAAAACAACCCCTTGTCTTGTTCATCATGGNTATCCTTTCCTCC
JMFF028O01+ AAATTACCAAGTTGAGAAAACAACCCCTTGTCTTGTTCATCATGGTTATCCTTTCCTCCT
JMFF021D24+ AAATTACCAAGTTGAGAAAACAACCCCTTGTCTTGTTCATCATGGTTATCCTTTCCTCCT
                      ____________________________________________________________
consensus AAATTACCAAGTTGAGAAAACAACCCCTTGTCTTGTTCATCATGGTTATCCTTTCCTCCT
 
. : . : . : . : . : . :
JMFF028O01+ CCCATTTCTCAGAGTTATCAAAACAAGAAGTAC
JMFF021D24+ CCCATTTCTCAGAGTTATCAAAACAAGAAGTACCTCAAAATTCGCAAACACATTCAACAA
JMFF038C20+ CCTCAAAATTCGCAAACACATTCAACAA
                      ____________________________________________________________
consensus CCCATTTCTCAGAGTTATCAAAACAAGAAGTACCTCAAAATTCGCAAACACATTCAACAA
 
. : . : . : . : . : . :
JMFF021D24+ TTCTCCGACTCTAGGAACACAGATCGTGAAGCTA
JMFF038C20+ TTCTCCGACTCTAGGAACACAGATCGTGAAGCTACNGACGCGTGATCATCATAAACATAT
                      ____________________________________________________________
consensus TTCTCCGACTCTAGGAACACAGATCGTGAAGCTACNGACGCGTGATCATCATAAACATAT