Contig 003217:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005D24Sequence435003217 (4)ref|XP_009587220.1|112PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]805008263 (4)ref|XP_009793275.1|140PREDICTED: uncharacterized protein LOC104240191 [Nicotiana sylvestris] ref|XP_00
JMFF033C22Sequence544003217 (4)ref|XP_009587220.1|151PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]757008263 (4)ref|XP_009587220.1|138PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]
JMSF037M12Sequence622003217 (4)ref|XP_009587220.1|176PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]682008263 (4)ref|XP_009793275.1|114PREDICTED: uncharacterized protein LOC104240191 [Nicotiana sylvestris] ref|XP_00
JMSF045D05Sequence781003217 (4)ref|XP_009587220.1|218PREDICTED: uncharacterized protein LOC104084961 [Nicotiana tomentosiformis]692008263 (4)ref|XP_009793275.1|140PREDICTED: uncharacterized protein LOC104240191 [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045D05+ CAACATAGCTGGTTTGTGGTTCTCGAACAATCTCATAAAT
                      ____________________________________________________________
consensus CAACATAGCTGGTTTGTGGTTCTCGAACAATCTCATAAAT
 
. : . : . : . : . : . :
JMSF045D05+ AGACACAACTTCCCCTGTTGAAGATATCTGGCCATGGCATGCAGCAGATTTAAGTTGATT
                      ____________________________________________________________
consensus AGACACAACTTCCCCTGTTGAAGATATCTGGCCATGGCATGCAGCAGATTTAAGTTGATT
 
. : . : . : . : . : . :
JMSF045D05+ ATCACAATCAGCACTTGTGTCAGTTTTGGCATGTTCAGTCCTCAGAAGACTGCAGTCTGA
                      ____________________________________________________________
consensus ATCACAATCAGCACTTGTGTCAGTTTTGGCATGTTCAGTCCTCAGAAGACTGCAGTCTGA
 
. : . : . : . : . : . :
JMSF045D05+ GCAAAACCAGTCACCCTCAGGGACAGTGGCACCAAGACCAACACAGTAAGTATGAGAAGC
JMSF037M12+ ACCAGTCACCTTCAGGGACAGTGGCACCAAGACCAACACAGTAAGTATGAGAAGC
                      ____________________________________________________________
consensus GCAAAACCAGTCACCTTCAGGGACAGTGGCACCAAGACCAACACAGTAAGTATGAGAAGC
 
. : . : . : . : . : . :
JMSF045D05+ AGAATCACAAAGGTCACACAGTAGAAGAAGACAATCATCAGCAGAGCTATGGCACACATT
JMSF037M12+ AGAATCACAAAGGTCACACAGTAGAAGAAGACAATCATCAGCAGAGCTATGGCACACATT
JMFF033C22+ CATT
                      ____________________________________________________________
consensus AGAATCACAAAGGTCACACAGTAGAAGAAGACAATCATCAGCAGAGCTATGGCACACATT
 
. : . : . : . : . : . :
JMSF045D05+ GCATTGAACTTCTGAATATGGATCAAATGACCCAGTTGTCAAATTTCCAAAATAATTGTA
JMSF037M12+ GCATTGAACTTCTGAATATGGATCAAATGACCCAGTTGTCAAATTTCCAAAATAATTGTA
JMFF033C22+ GCATTGAACTTCTGAATATGGATCAAATGACCCAGTTGTCAAATTTCCAAAATAATTGTA
                      ____________________________________________________________
consensus GCATTGAACTTCTGAATATGGATCAAATGACCCAGTTGTCAAATTTCCAAAATAATTGTA
 
. : . : . : . : . : . :
JMSF045D05+ AACCTGATCGCGAAGAGGGACGCGAACAACGCGCTCGGAAGGGAAGACGGGGGGTTTGGG
JMFF005D24+ GAAGAGGGACGCGAACAACGCGCTCGGAAGGGAAGACGGGGGGTTTGGG
JMSF037M12+ AACCTGATCGCGAAGAGGGACGCGAACAACGCGCTCGGAAGGGAAGACGGGGGGTTTGGG
JMFF033C22+ AACCTGATCGCGAAGAGGGACGCGAACAACGCGCTCGGAAGGGAAGACGGGGGGTTTGGG
                      ____________________________________________________________
consensus AACCTGATCGCGAAGAGGGACGCGAACAACGCGCTCGGAAGGGAAGACGGGGGGTTTGGG
 
. : . : . : . : . : . :
JMSF045D05+ AGGGCGGCGGATGGCGGAGAATCGGGCCTTGCATATGGGGCATCTGGACTCAACCTTGGA
JMFF005D24+ AGGGCGGCGGATGGCGGAGAATCGGGCCTTGCATATGGGGCATCTGGACTCAACCTTGGA
JMSF037M12+ AGGGCGGCGGATGGCGGAGAATCGGGCCTTGCATATGGGGCATCTGGACTCAACCTTGGA
JMFF033C22+ AGGGCGGCGGATGGCGGAGAATCGGGCCTTGCATATGGGGCATCTGGACTCAACCTTGGA
                      ____________________________________________________________
consensus AGGGCGGCGGATGGCGGAGAATCGGGCCTTGCATATGGGGCATCTGGACTCAACCTTGGA
 
. : . : . : . : . : . :
JMSF045D05+ CCACTCCATGATGCACAAGAAGCAGAAGAAATGCTCGCAGCTGTCGATGCATCCTTGAAT
JMFF005D24+ CCACTCCATGATGCACAAGAAGCAGAAGAAATGCTCGCAGCTGTCGATGCATCCTTGAAT
JMSF037M12+ CCACTCCATGATGCACAAGAAGCAGAAGAAATGCTNGCAGCTGTCGATGCATCCTTGAAT
JMFF033C22+ CCACTCCATGATGCACAAGAAGCAGAAGAAATGCTCGCAGCTGTCGATGCATCCTTGAAT
                      ____________________________________________________________
consensus CCACTCCATGATGCACAAGAAGCAGAAGAAATGCTCGCAGCTGTCGATGCATCCTTGAAT
 
. : . : . : . : . : . :
JMSF045D05+ TATGGCGGAGCCCTGCCCGGCTTCCGACAGGCAAATCCCGCAGCAGATTTCCGATTCCTC
JMFF005D24+ TATGGCGGAGCCCTGCCCGGCTTCCGACAGGCAAATCCCGCAGCAGATTTCCGATTCCTC
JMSF037M12+ TATGGCGGAGCCCTGCCCGGCTTCCGACAGGCAAATCCCGCAGCAGATTTCCGATTCCTC
JMFF033C22+ TATGGCGGAGCCCTGCCCGGCTTCCGACAGGCAAATCCCGCAGCAGATTTCCGATTCCTC
                      ____________________________________________________________
consensus TATGGCGGAGCCCTGCCCGGCTTCCGACAGGCAAATCCCGCAGCAGATTTCCGATTCCTC
 
. : . : . : . : . : . :
JMSF045D05+ GCCCTCCGACTCCGAGATTTCCACTTTGGACTTCCCCTTATCGGACGACGAAGATTGAAG
JMFF005D24+ GCCCTCCGACTCCGAGATTTCCACTTTGGACTTCCCCTTATCGGACGACGAAGATTGAAG
JMSF037M12+ GCCCTCCGACTCCGAGATTTCCACTTTGGACTTCCCCTTATCGGACGACGAAGATTGAAG
JMFF033C22+ GCCCTCCGACTCCGAGATTTCCACTTTGGACTTCCCCTTATCGGACGACGAAGATTGAAG
                      ____________________________________________________________
consensus GCCCTCCGACTCCGAGATTTCCACTTTGGACTTCCCCTTATCGGACGACGAAGATTGAAG
 
. : . : . : . : . : . :
JMSF045D05+ CAGCGGCGGCGGCTCTAGTGTTTTGAGGCGTTTGCTTGCCGGAGCATCTGCTTCGTCGCC
JMFF005D24+ CAGCGGCGGCGGCTCTAGTGTTTTGAGGCGTTTGCTTGCCGGAGCATCTGCTTCGTCGCC
JMSF037M12+ CAGCGGCGGCGGCTCTAGTGTTTTGAGGCGTTTGCTTGCCGGAGCATCTGCTTCGTCGCC
JMFF033C22+ CAGCGGCGGCGGCTCTAGTGTTTTGAGGCGTTTGCTTGCCGGAGCATCTGCTTCGTCGCC
                      ____________________________________________________________
consensus CAGCGGCGGCGGCTCTAGTGTTTTGAGGCGTTTGCTTGCCGGAGCATCTGCTTCGTCGCC
 
. : . : . : . : . : . :
JMSF045D05+ GGCGGCCATTTCCTCCCGGCCGGAATGCAGTCGCAGTCGATTTCTTAGTTTTTAACGCTG
JMFF005D24+ GGCGGCCATTTCCTCCCGGCCGGAATGCAGTCGCAGTCGATTTCTTAGTTTTTAACGCTG
JMSF037M12+ GGCGGCCATTTCCTCCCGGCCGGAATGCAGTCGCAGTCGATTTCTTAGTTTTTAACGCTG
JMFF033C22+ GGCGGCCATTTCCTCCCGGCCGGAATGCAGTCGCAGTCGATTTCTTAGTTTTTAACGCTG
                      ____________________________________________________________
consensus GGCGGCCATTTCCTCCCGGCCGGAATGCAGTCGCAGTCGATTTCTTAGTTTTTAACGCTG
 
. : . : . : . : . : . :
JMSF045D05+ AATCAAACCGGTGGCCACCC
JMFF005D24+ AATCAAACCGGTGGCCACCC
JMSF037M12+ AATCAAACCGGTGGCCACCC
JMFF033C22+ AATCAAACCGGTGGCCACCCAGCTCCACTCTCCTCAGTCTCGCATGTACATAGAGATATC
                      ____________________________________________________________
consensus AATCAAACCGGTGGCCACCCAGCTCCACTCTCCTCAGTCTCGCATGTACATAGAGATATC