Contig 003208:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006B02Sequence498003208 (7)ref|XP_009612875.1|2e-45PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis]
JMFF018E15Sequence522003208 (7)ref|XP_009612875.1|3e-50PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis]763005397 (3)ref|XP_009608295.1|2e-109PREDICTED: importin subunit alpha-2-like [Nicotiana tomentosiformis]
JMFF026O14Sequence521003208 (7)ref|XP_009612875.1|1e-50PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis]768005397 (3)ref|XP_009608295.1|3e-110PREDICTED: importin subunit alpha-2-like [Nicotiana tomentosiformis]
JMFF031H04Sequence603003208 (7)ref|XP_009612875.1|2e-51PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis]716005397 (3)ref|XP_009608295.1|1e-103PREDICTED: importin subunit alpha-2-like [Nicotiana tomentosiformis]
JMFF031M19Sequence459003208 (7)gb|KDP29088.1|1e-38hypothetical protein JCGZ_16477 [Jatropha curcas]
JMFF043P11Sequence631003208 (7)ref|XP_009612875.1|7e-54PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis]651006943 (12)ref|XP_009794756.1|1e-18PREDICTED: ethylene-responsive transcription factor RAP2-12-like [Nicotiana syl
JMFF046H23Sequence568003208 (7)ref|XP_002279724.1|9e-44PREDICTED: importin subunit alpha-2 [Vitis vinifera] emb|CBI32701.3| unnamed pro

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF043P11+ CCAAGCCGCTTCAAGCAACTGTTCATCTGGA
JMFF031H04+ GGA
                      ____________________________________________________________
consensus CCAAGCCGCTTCAAGCAACTGTTCATCTGGA
 
. : . : . : . : . : . :
JMFF046H23+ GCAGAGCTCCAGCCTCGAGGGCAGCTTCA
JMFF043P11+ GACCCAAATGAAAGACATTTCACAAGGAGAGGCAGAGCTCCAGCCTCGAGGGCAGCTTCA
JMFF031H04+ GACCCAAATGAAAGACATTTCACAAGGAGAGGCAGAGCTCCAGCNTCGAGGGCAGCTTCA
                      ____________________________________________________________
consensus GACCCAAATGAAAGACATTTCACAAGGAGAGGCAGAGCTCCAGCCTCGAGGGCAGCTTCA
 
. : . : . : . : . : . :
JMFF018E15+ CTAGAAAGCAGACGTCTTAGCTCACGGAGAGCATTCACTCTT
JMFF046H23+ ACAGGA-GGAATTCTGACCTAGAAAGCAGACGTCTTAGCTCACGGAGAGCATTCACTCTT
JMFF043P11+ ACAGGAGGGAATTCTGACCTAGAAAGCAGACGTCTTAGCTCACGGAGAGCATTCACTCTN
JMFF026O14+ TAGAAAGCAGACGTCTTAGCTCACGGAGAGCATTCACTCTT
JMFF031H04+ ACAGGAGGGAATTCTGACCTAGAAAGCAGACGTCTTAGCTCACGGAGAGCATTCACTCTT
JMFF006B02+ CGGAGAGCATTCACTCTT
                      ____________________________________________________________
consensus ACAGGAGGGAATTCTGACCTAGAAAGCAGACGTCTTAGCTCACGGAGAGCATTCACTCTT
 
. : . : . : . : . : . :
JMFF018E15+ TCCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
JMFF046H23+ TCCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
JMFF043P11+ TTCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
JMFF026O14+ TTCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
JMFF031H04+ TTCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
JMFF006B02+ TTCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
JMFF031M19+ TGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
                      ____________________________________________________________
consensus TTCTGTACAGCACCTTTCCCCTGATGGGCAACAGCAAGTTTTAATTCTTCCACAGCTGAT
 
. : . : . : . : . : . :
JMFF018E15+ GAAGTCTGAACCTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
JMFF046H23+ GAAGTCTGAACCTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
JMFF043P11+ GAAGTCTGAACCTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
JMFF026O14+ GAAGTCTGAAACTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
JMFF031H04+ GAAGTCTGAAACTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
JMFF006B02+ GAAGTCTGAACCTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
JMFF031M19+ GAAGTCTGAACCTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
                      ____________________________________________________________
consensus GAAGTCTGAACCTCCAAAATAGATTGCTCTTCGTCAATCATCATATCAGCTTCAGGAGCA
 
. : . : . : . : . : . :
JMFF018E15+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
JMFF046H23+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
JMFF043P11+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
JMFF026O14+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
JMFF031H04+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
JMFF006B02+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
JMFF031M19+ ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
                      ____________________________________________________________
consensus ACATCAGAATCACCAGTAATCCCCACCCTGCAAAGGCGCTTTGTTCTCATCAGCGTTTCT
 
. : . : . : . : . : . :
JMFF018E15+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
JMFF046H23+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
JMFF043P11+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
JMFF026O14+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
JMFF031H04+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
JMFF006B02+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
JMFF031M19+ CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
                      ____________________________________________________________
consensus CTTCTTTCTTTCCCCACTGTAACTGCATTCTCCCGTCTTCTTTGTGCTGCAGTATTCCCA
 
. : . : . : . : . : . :
JMFF018E15+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
JMFF046H23+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
JMFF043P11+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
JMFF026O14+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
JMFF031H04+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
JMFF006B02+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
JMFF031M19+ ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
                      ____________________________________________________________
consensus ACTGATGACTTTATGGGGTCTCTTTTATGAGAAGCCGCGCCTTCATCCGCCATTACTGCT
 
. : . : . : . : . : . :
JMFF018E15+ GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
JMFF046H23+ GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
JMFF043P11+ GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
JMFF026O14+ GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
JMFF031H04+ GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
JMFF006B02+ GAAGTAAGCTCCAAGANTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
JMFF031M19+ GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
                      ____________________________________________________________
consensus GAAGTAAGCTCCAAGACTAAGTTCTCCACTTGGATTTCCGGTGAATAGCAGATAATAAAA
 
. : . : . : . : . : . :
JMFF018E15+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
JMFF046H23+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
JMFF043P11+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
JMFF026O14+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
JMFF031H04+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
JMFF006B02+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
JMFF031M19+ TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
                      ____________________________________________________________
consensus TTAAAGCATTGAGCTTTTAGCTGCTGGGATTTATGGGATTTTGGTTTTTTGTGCTGTTCA
 
. : . : . : . : . : . :
JMFF018E15+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
JMFF046H23+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
JMFF043P11+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
JMFF026O14+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
JMFF031H04+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
JMFF006B02+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
JMFF031M19+ ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT
                      ____________________________________________________________
consensus ACACCACTCAGTGTGATATGATTGTTCCCCTTTCTCGGCGCTCGCCCGAGAACCGAAAAT