Contig 003199:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030J02Sequence272003199 (2)emb|CDP04813.1|2e-31unnamed protein product [Coffea canephora]711023369ref|XP_009776850.1|1e-87PREDICTED: zeaxanthin epoxidase, chloroplastic [Nicotiana sylvestris]
JMFS120D01Sequence626003199 (2)emb|CDP04812.1|9e-92unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS120D01+                        ATGCCAATTATGGCTTCTGAATTCTCATTATTTGAAAAATCAAGAAC
                      ____________________________________________________________
consensus                          ATGCCAATTATGGCTTCTGAATTCTCATTATTTGAAAAATCAAGAAC
 
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JMFS120D01+           CCCTCTCCATGCACAATTACCCGAATACCTTAGTTTGAAGTCAGGAAGGAAACTTTGCCT
                      ____________________________________________________________
consensus             CCCTCTCCATGCACAATTACCCGAATACCTTAGTTTGAAGTCAGGAAGGAAACTTTGCCT
 
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JMFS120D01+           GATTGAAGATAAACAGCCGTCAGCAGCAACAAGCAAATCGCCAACAATGGAGATCGTGTC
                      ____________________________________________________________
consensus             GATTGAAGATAAACAGCCGTCAGCAGCAACAAGCAAATCGCCAACAATGGAGATCGTGTC
 
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JMFS120D01+           CCCAGTAGTAAGGACCTTCGTTTTGACAGTGACACGAGATTTGTCATCAGATAAAGAAAA
                      ____________________________________________________________
consensus             CCCAGTAGTAAGGACCTTCGTTTTGACAGTGACACGAGATTTGTCATCAGATAAAGAAAA
 
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JMFS120D01+           GGAAAGAAATGAATGAGCCCAGAATACAATACTTTGGGGCAGAGCATTATACAGAAGGGT
                      ____________________________________________________________
consensus             GGAAAGAAATGAATGAGCCCAGAATACAATACTTTGGGGCAGAGCATTATACAGAAGGGT
 
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JMFS120D01+           ATAGAGATCAGCCCAATAAGCTGCTCTAAAGTTGAAATCTTCATCCCTTGTTAATTTCCA
                      ____________________________________________________________
consensus             ATAGAGATCAGCCCAATAAGCTGCTCTAAAGTTGAAATCTTCATCCCTTGTTAATTTCCA
 
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JMFS120D01+           GCTGATTTTCTTTTCTGCATCTGTTGCCTTGTGTTCGTGGATTGTGAGTGGCAGGGTGGA
JMFF030J02+                                                  GATTGTGAGTGGCAGAGTGGA
                      ____________________________________________________________
consensus             GCTGATTTTCTTTTCTGCATCTGTTGCCTTGTGTTCGTGGATTGTGAGTGGCAGGGTGGA
 
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JMFS120D01+           CTGATGAAGAAGGTCGGGCTGAGGGAGCCAAGACTCGATGAGTTTCCGGGCCAAAGGGTC
JMFF030J02+           GAGATGAAGAAGATCGGGCTGAGGGAGCCAAGATTGGATGAGTTTCCGGGCCAGAGGGTC
                      ____________________________________________________________
consensus             GTGATGAAGAAGGTCGGGCTGAGGGAGCCAAGATTGGATGAGTTTCCGGGCCAGAGGGTC
 
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JMFS120D01+           GAGTCCGAGTCCGGCGCCGGTGGGACTGCCGGTTGGCAGCGCGGAGGTTTTCTCCAGCAC
JMFF030J02+           GAGACCGAGTCCGGCGCCGGTGGGACTGCCGGTCGGCGGCGCGGAGGTTTTCTCTAGCAC
                      ____________________________________________________________
consensus             GAGTCCGAGTCCGGCGCCGGTGGGACTGCCGGTTGGCGGCGCGGAGGTTTTCTCTAGCAC
 
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JMFS120D01+           CACCACTTCCCAGCCAGCTCCGATGAGCGCGTGCGCGCAGGATATCCCTGCTATGCTTCC
JMFF030J02+           CACCACGTCCCAGCCTGCTCCGATGAGCGCGTGCGCGCAGGATATCCCTGCTATGCTTCC
                      ____________________________________________________________
consensus             CACCACTTCCCAGCCTGCTCCGATGAGCGCGTGCGCGCAGGATATCCCTGCTATGCTTCC
 
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JMFS120D01+           CCCTACCACCACGGCCTTGCCTTTTCTCTTTCC                           
JMFF030J02+           CCCTACCACCACAGCCTTGCCTTTTCTCTTTCCCCCTTCCATTTCTCAGTTCAGAAATCC
                      ____________________________________________________________
consensus             CCCTACCACCACGGCCTTGCCTTTTCTCTTTCCCCCTTCCATTTCTCAGTTCAGAAATCC