Contig 003173:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019O21Sequence583003173 (5)ref|NP_001289513.1|1e-754-coumarate--CoA ligase-like 1 [Nicotiana sylvestris] gb|AAO25511.1| 4-coumarate655011193 (3)gb|KDO81878.1|1e-79hypothetical protein CISIN_1g0398371mg, partial [Citrus sinensis]
JMFF024K12Sequence462003173 (5)ref|NP_001289513.1|9e-584-coumarate--CoA ligase-like 1 [Nicotiana sylvestris] gb|AAO25511.1| 4-coumarate786011193 (3)ref|XP_002514904.1|7e-100AMP dependent CoA ligase, putative [Ricinus communis] gb|EEF47458.1| AMP depende
JMFF047A17Sequence482003173 (5)ref|NP_001289513.1|1e-574-coumarate--CoA ligase-like 1 [Nicotiana sylvestris] gb|AAO25511.1| 4-coumarate335011193 (3)gb|KDO81878.1|4e-11hypothetical protein CISIN_1g0398371mg, partial [Citrus sinensis]
JMFN032M04Sequence627003173 (5)ref|NP_001289513.1|5e-874-coumarate--CoA ligase-like 1 [Nicotiana sylvestris] gb|AAO25511.1| 4-coumarate
JMFS021F01Sequence612003173 (5)ref|NP_001289513.1|3e-864-coumarate--CoA ligase-like 1 [Nicotiana sylvestris] gb|AAO25511.1| 4-coumarate

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS021F01+ GCCCGAGGAGAAAGGAAGGGCACACAGATCGTT
JMFN032M04+ TCGTGCCCGAGGAGAAAGGAAGGGCACACAGATCGTT
                      ____________________________________________________________
consensus TCGTGCCCGAGGAGAAAGGAAGGGCACACAGATCGTT
 
. : . : . : . : . : . :
JMFS021F01+ CTGTTTCACCACCTCGTCTTCACTGAATGCAAAATCATTGCTTGCACGGTCTGCAGCTTC
JMFN032M04+ CTGTTTCACCACCTCGTCTTCACTGAATGCAAAATCATTGCTTGCACGGTCTGCAGCTTC
JMFF019O21+ CTTCACTGAATGCAAAATCATTGCTTGCACGGTCTGCAGCTTC
                      ____________________________________________________________
consensus CTGTTTCACCACCTCGTCTTCACTGAATGCAAAATCATTGCTTGCACGGTCTGCAGCTTC
 
. : . : . : . : . : . :
JMFS021F01+ CAGCAGTTCACCCCAGTTTATGGTTCCCTGCACACGTTCTTCGTCTACTACTATCACCGG
JMFN032M04+ CAGCAGTTCACCCCAGTTTATGGTTCCCTGCACACGTTCTTCGTCTACTACTATCACCGG
JMFF047A17+ CGG
JMFF019O21+ CAGCAGTTCACCCCAGTTTATGGTTCCCTGCACACGTTCTTCGTCTACTACTATCACCGG
                      ____________________________________________________________
consensus CAGCAGTTCACCCCAGTTTATGGTTCCCTGCACACGTTCTTCGTCTACTACTATCACCGG
 
. : . : . : . : . : . :
JMFS021F01+ AAGCCCCAAATCTTTCACCTTGTAATAAGTCGGTGCATCAACGACAATGAGCTTCGCATC
JMFN032M04+ AAGCCCCAAATCTTTCACCTTGTAATAAGTCGGTGCATCAACGACAATGAGCTTCGCATC
JMFF047A17+ AAGCCCCAAATCTTTCACC-TGTAATAAGTCGGTGCATCAACGACAATGAGCTTCGCATC
JMFF019O21+ AAGCCCCAAATCTTTCACCTTGTAATAAGTCGGTGCATCAACGACAATGAGCTTCGCATC
JMFF024K12+ CTTGTAATAAGTCGGTGCATCAACGACAATGAGCTTCGCATC
                      ____________________________________________________________
consensus AAGCCCCAAATCTTTCACCTTGTAATAAGTCGGTGCATCAACGACAATGAGCTTCGCATC
 
. : . : . : . : . : . :
JMFS021F01+ TGCAACTTGAACTTGCTTCTCGAGCTCCGATGCATGGGAAGTCGGGTTAGCGCCCGATAA
JMFN032M04+ TGCAACTTGAACTTGCTTCTCGAGCTCCGATGCATGGGAAGTCGGGTTAGCGCCCGATAA
JMFF047A17+ TGCAACTTGAACTTGCTTCTCGAGCTCCGATGCATGGGAAGTCGGGTTAGCGCCCGATAA
JMFF019O21+ TGCAACTTGAACTTGCTTCTCGAGCTCCGATGCATGGGAAGTCGGGTTAGCGCCCGATAA
JMFF024K12+ TGCAACTTGAACTTGCTTCTCGAGCTCCGATGCATGGGAAGTCGGGTTAGCGCCCGATAA
                      ____________________________________________________________
consensus TGCAACTTGAACTTGCTTCTCGAGCTCCGATGCATGGGAAGTCGGGTTAGCGCCCGATAA
 
. : . : . : . : . : . :
JMFS021F01+ GACGCCACCGGCCGCCATGATTCCCAGTGCAATGATGGGATATTCAGCCACGTTTGGGAG
JMFN032M04+ GACGCCACCGGCCGCCATGATTCCCAGTGCAATGATGGGATATTCAGCCACGTTTGGGAG
JMFF047A17+ GACGCCACCGGCCGCCATGATTCCCAGTGCAATGATGGGATATTCAGCCACGTTTGGGAG
JMFF019O21+ GACGCCACCGGCCGCCATGATTCCCAGTGCAATGATGGGATATTCAGCCACGTTTGGGAG
JMFF024K12+ GACGCCACCGGCCGCCATGATTCCCAGTGCAATGATGGGATATTCAGCCACGTTTGGGAG
                      ____________________________________________________________
consensus GACGCCACCGGCCGCCATGATTCCCAGTGCAATGATGGGATATTCAGCCACGTTTGGGAG
 
. : . : . : . : . : . :
JMFS021F01+ CACGACGACCACCAGTCTCCCCTTCCTCAGGCCCAGCGACCTCAACGCCTTAGCAAACCT
JMFN032M04+ CACGACGACCACCAGTCTCCCCTTCCTCAGGCCCAGCGACCTCAACGCCTTAGCAAACCT
JMFF047A17+ CACGACGACCACCAGTCTCCCCTTCCTCAGGCCCAGCGACCTCAACGCCTTAGCAAACCT
JMFF019O21+ CACGACGACCACCAGTCTCCCCTTCCTCAGGCCCAGCGACCTCAACGCCTTAGCAAACCT
JMFF024K12+ CACGACGACCACCAGTCTCCCCTTCCTCAGGCCCAGCGACCTCAACGCCTTAGCAAACCT
                      ____________________________________________________________
consensus CACGACGACCACCAGTCTCCCCTTCCTCAGGCCCAGCGACCTCAACGCCTTAGCAAACCT
 
. : . : . : . : . : . :
JMFS021F01+ CCTGACATCCCTCGCAACTTGGCCATATGTGTACTCTTTCCCCGTCGTGGCATCCACAAT
JMFN032M04+ CCTGACATCCCTCGCAACTTGGCCATATGTGTACTCTTTCCCCGTCGTGGCATCCACAAT
JMFF047A17+ CCTGACATCCCTCGCAACTTGGCCATATGTGTACTCTTTCCCCGTCGTGGCATCCACAAT
JMFF019O21+ CCTGACATCCCTCGCAACTTGGCCATATGTGTACTCTTTCCCCGTCGTGGCATCCACAAT
JMFF024K12+ CCTGACATCCCTCGCAACTTGGCCATATGTGTACTCTTTCCCCGTCGTGGCATCCACAAT
                      ____________________________________________________________
consensus CCTGACATCCCTCGCAACTTGGCCATATGTGTACTCTTTCCCCGTCGTGGCATCCACAAT
 
. : . : . : . : . : . :
JMFS021F01+ AGCCACCTTATCAGCGTAGAGCTCCACGTTATGAAGCACGAAATCAGGCAGTGTCATGTC
JMFN032M04+ AGCCACCTTATCAGCGTAGAGCTCCACGTTATGAAGCACGAAATCAGGCAGTGTCATGTC
JMFF047A17+ AGCCACCTTATCAGCGTAGAGCTCCACGTTATGAAGCACGAAATCAGGCAGTGTCATGTC
JMFF019O21+ AGCCACCTTATCAGCGTAGAGCTCCACGTTATGAAGCACGAAATCAGGCAGTGTCATGTC
JMFF024K12+ AGCCACCTTATCAGCGTAGAGCTCCACGTTATGAAGCACGAAATCAGGCAGTGTCATGTC
                      ____________________________________________________________
consensus AGCCACCTTATCAGCGTAGAGCTCCACGTTATGAAGCACGAAATCAGGCAGTGTCATGTC
 
. : . : . : . : . : . :
JMFS021F01+ ATCAGGGACTTGGACTGGTGGATATTTGCTCCTGAAGATATGCTCATCGTCTTGTTTTGT
JMFN032M04+ ATCAGGGACTTGGACTGGTGGATATTTGCTCCTGAAGATATGCTCATCGTCTTGTTTTGT
JMFF047A17+ ATCAGGGACTTGGACTGGTGGATATTTGCTCCTGAAGATATGCTCATCGTCTTGTTTTGT
JMFF019O21+ ATCAGGGACTTGGACTGGTGGATATTTGCTCCTGAAGATATGCTCATCGTCTTGTTTTGT
JMFF024K12+ ATCAGGGACTTGGACTGGTGGATATTTGCTCCTGAAGATATGCTCATCGTCTTGTTTTGT
                      ____________________________________________________________
consensus ATCAGGGACTTGGACTGGTGGATATTTGCTCCTGAAGATATGCTCATCGTCTTGTTTTGT
 
. : . : . : . : . : . :
JMFS021F01+ AGAGGTTTGTCCTGCATTAGAGCCCATGTTTGATAGTAA
JMFN032M04+ AGAGGTTTGTCCTGCATTAGAGCCCATGTTTGATAGTAAGATGTTTAGCA
JMFF047A17+ AGAGGTTTGTCCTGCATTAGAGCCCATGTTTGATAGTAAGATGTTTAGCAGAAAACTAGT
JMFF019O21+ AGAGGTTTGTCCTGCATTAGAGCCCATGTTTGATAGTAAGATGTTTAGCAGAAAACTAGT
JMFF024K12+ AGAGGTTTGTCCTGCATTAGAGCCCATGTTTGATAGTAAGATGTTTAGCAGAAAACTAGT
                      ____________________________________________________________
consensus AGAGGTTTGTCCTGCATTAGAGCCCATGTTTGATAGTAAGATGTTTAGCAGAAAACTAGT