| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008I23 | Sequence | 608 | 003155 (9) | gb|KJB22851.1| | 1e-52 | hypothetical protein B456_004G069700 [Gossypium raimondii] | 760 | 003155 (9) | ref|XP_009623404.1| | 8e-132 | PREDICTED: ELMO domain-containing protein C-like isoform X1 [Nicotiana tomentos |
| JMFF019P01 | Sequence | 510 | 003155 (9) | ref|XP_008232536.1| | 7e-14 | PREDICTED: ELMO domain-containing protein A isoform X1 [Prunus mume] | 638 | 003155 (9) | ref|XP_009623404.1| | 2e-105 | PREDICTED: ELMO domain-containing protein C-like isoform X1 [Nicotiana tomentos |
| JMFF021A03 | Sequence | 644 | 003155 (9) | ref|XP_009623404.1| | 5e-42 | PREDICTED: ELMO domain-containing protein C-like isoform X1 [Nicotiana tomentos | |||||
| JMFF044K12 | Sequence | 633 | 003155 (9) | gb|KJB22850.1| | 1e-58 | hypothetical protein B456_004G069700 [Gossypium raimondii] | 586 | 003155 (9) | ref|XP_009623404.1| | 6e-80 | PREDICTED: ELMO domain-containing protein C-like isoform X1 [Nicotiana tomentos |
| JMSF015B06 | Sequence | 330 | 003155 (9) | 796 | 003155 (9) | ref|XP_009623404.1| | 3e-127 | PREDICTED: ELMO domain-containing protein C-like isoform X1 [Nicotiana tomentos | |||
This contig is upended
. : . : . : . : . : . :
rJMFF019P01- AGAAAAGTAGAAAACAAGGGGAGAATTAACCTTTGTAGAAA
____________________________________________________________
consensus AGAAAAGTAGAAAACAAGGGGAGAATTAACCTTTGTAGAAA
. : . : . : . : . : . :
rJMFF019P01- AAAAAGTCCAAAACCAAAACCAATAAATGCCACAGATCTTGCACGTGGAAATCATTTCTT
____________________________________________________________
consensus AAAAAGTCCAAAACCAAAACCAATAAATGCCACAGATCTTGCACGTGGAAATCATTTCTT
. : . : . : . : . : . :
rJMFF044K12- AGTACAAAACTATCAACTAAGGAGGTTGTACGA
rJMFF019P01- TTTGAGATTCCACTCTGAAACGTTAGTTGTACAAAACTATCAACTAAGGAGGTTGTACGA
rJMSF015B06- AGTACAAAACTATCAACTAAGGAGGTTGTACGA
rJMFF008I23- AGTACAAAACTATCAACTAAGGAGGTTGTACGA
____________________________________________________________
consensus TTTGAGATTCCACTCTGAAACGTTAGTAGTACAAAACTATCAACTAAGGAGGTTGTACGA
. : . : . : . : . : . :
rJMFF044K12- GGGCAAATCTTCCAGCCGTGTCACATCATCTTGTAGAAGTTCACTTTCCAGTTGCCGCCG
rJMFF019P01- GGGCAAATCTTCCAGCCGTGTCACATCATCTTGTANAAGTTCACTTTCCAGTTGCCGCCG
rJMSF015B06- GGGCAAATCTTCCAGCCGTGTCACATCATCTTGTANAAGTTCACTTTCCAGTTGCCGCCG
rJMFF008I23- GGGCAAATCTTCCAGCCGTGTCACATCATCTTGTAGAAGTTCACTTTCCAGTTGCCGCCG
____________________________________________________________
consensus GGGCAAATCTTCCAGCCGTGTCACATCATCTTGTAGAAGTTCACTTTCCAGTTGCCGCCG
. : . : . : . : . : . :
rJMFF044K12- TGTAGCCTTCATAACAGTATTGAAGTCCATGTATGATGCACGCATGACAAGCCATTGGTG
rJMFF019P01- TGTAGCCTTCATAACAGTATTGAAGTCCATGTATGATGCACGCATGACAAGCCATTGGTG
rJMSF015B06- TGTAGCCTTCATAACAGTATTGAAGTCCATGTATGATGCACGCATGACAAGCCATTGGTG
rJMFF008I23- TGTAGCCTTCATAACAGTATTGAAGTCCATGTATGATGCACGCATGACAAGCCATTGGTG
____________________________________________________________
consensus TGTAGCCTTCATAACAGTATTGAAGTCCATGTATGATGCACGCATGACAAGCCATTGGTG
. : . : . : . : . : . :
rJMFF044K12- ATCCATCAGCTTGAATGCAATACAGTATAGAAGGTCAAATGCCGATTCATTTTCTGCCAG
rJMFF019P01- ATCCATCAGCTTGAATGCAATACAGTATAGAAGGTCAAATGCCGATTCATTTTCTGCCAN
rJMSF015B06- ATCCATCAGCTTGAATGCAATACAGTATAGAAGGTCAAATGCCGATTCATTTTCTGCCAG
rJMFF008I23- ATCCATCAGCTTGAATGCAATACAGTATAGAAGGTCAAATGCCGATTCATTTTCTGCCAG
____________________________________________________________
consensus ATCCATCAGCTTGAATGCAATACAGTATAGAAGGTCAAATGCCGATTCATTTTCTGCCAG
. : . : . : . : . : . :
rJMFF044K12- AAACTTCAAGAAGGCTGCTCCTACCAGGTTGCGTGGTTTTACTGCTTCTAAATCAAGCAT
rJMFF019P01- AAACTTCAAGAAGGCTGCTCCTACCAGGTTGCGTGGTTTTACTGCTTCTAAATCAAGCAT
rJMSF015B06- AAACTTCAAGAAGGCTGCTCCTACCAGGTTGCGTGGTTTTACTGCTTCTAAATCAAGCAT
rJMFF008I23- AAACTTCAAGAAGGCTGCTCCTACCAGGTTGCGTGGTTTTACTGCTTCTAAATCAAGCAT
____________________________________________________________
consensus AAACTTCAAGAAGGCTGCTCCTACCAGGTTGCGTGGTTTTACTGCTTCTAAATCAAGCAT
. : . : . : . : . : . :
rJMFF044K12- CTGGGTAAGCATGAATGTGATGTTAACACCAGCTACAGCAAATGGGTATTCCCACATGGC
rJMFF019P01- CTGGGTAAGCATGAATGTGATGTTAACACCAGCTACAGCAAATGGGTATTCCCACATGGC
rJMSF015B06- CTGGGTAAGCATGAATGTGATGTTAACACCAGCTACAGCAAATGGGTATTCCCACATGGC
rJMFF008I23- CTGGGTAAGCATGAATGTGATGTTAACACCAGCTACAGCAAATGGGTATTCCCACATGGC
____________________________________________________________
consensus CTGGGTAAGCATGAATGTGATGTTAACACCAGCTACAGCAAATGGGTATTCCCACATGGC
. : . : . : . : . : . :
rJMFF044K12- CCTGTCACCTTCCTGCTTTCGAAGAAGATCCTGGAAGGATTTAGGGAAGTTCCTAGCANA
rJMFF019P01- CCTGTCACCTTCCTGCTTTCGAAGAAGATCCTGGAAGGATTTAGGGAAGTTCCTAGCAAA
rJMSF015B06- CCTGTCACCTTCCTGCTTTCGAANAANATCCTGGAAGGATTTAGGGAAGTTCCTAGCAAA
rJMFF008I23- CCTGTCACCTTCCTGCTTTCGAAGAAGATCCTGGAAGGATTTAGGGAAGTTCCTAGCAAA
____________________________________________________________
consensus CCTGTCACCTTCCTGCTTTCGAAGAAGATCCTGGAAGGATTTAGGGAAGTTCCTAGCAAA
. : . : . : . : . : . :
rJMFF044K12- ATATAAACAATTTTCCAG
rJMFF019P01- ATATAACAAATTTTCCAGTGATATAAATCCACCACCCCTGAAGTCAGTAGATGGATCTTT
rJMSF015B06- ATATAACAAATTTTCCAGTGATATAAATCCACCACCCCTGAAGTCAGTAGATGGATCTTT
rJMFF008I23- ATATAACAAATTTTCCAGTGATATAAATCCACCACCCCTGAAGTCAGTAGATGGATCTTT
____________________________________________________________
consensus ATATAACAAATTTTCCAGTGATATAAATCCACCACCCCTGAAGTCAGTAGATGGATCTTT
. : . : . : . : . : . :
rJMFF019P01- ACCTTGCCAACCCATGTCCTTCCACTGCTCAGATATTA
rJMSF015B06- ACCTTGCCAACCCATGTCCTTCCACTGCTCANATATTAGGCCGCGGAGTTCCTCCTCAGG
rJMFF008I23- ACCTTGCCAACCCATGTCCTTCCACTGCTCAGATATTANGCCGCGGAGTTCCTCCTCAGG
JMFF044K12+ GCCAACCCATGTCCTTCCACTGCTCAGATATTAGGCCGCGGAGTTCCTCCTCAGG
JMFF008I23+ CTCAGATATTAGGCCGCGGAGTTCCTCCTCAGG
____________________________________________________________
consensus ACCTTGCCAACCCATGTCCTTCCACTGCTCAGATATTAGGCCGCGGAGTTCCTCCTCAGG
. : . : . : . : . : . :
rJMSF015B06- AAAGGCGGCATTCCACAAAGCTTTTAAAGCTTCCTGATGTTCAGGAAGTGAACTATCATA
rJMFF008I23- AAAGGCGGCATTCCACAAAGCTTTTAAAGCTTCCTGATGTTCAGGAAGTGAACTATCATA
JMFF044K12+ AAAGGCGGCATTCCACAAAGCTTTTAAAGCTTCCTGATGTTCAGGAAGTGAACTATCATA
JMFF008I23+ AAAGGCGGCATTCCACAAAGCTTTTAAAGCTTCCTGATGTTCAGGAAGTGAACTATCATA
JMFF021A03+ AAAGCTTTTAAAGCTTCCTGATGTTCAGGAAGTGAACTATCATA
____________________________________________________________
consensus AAAGGCGGCATTCCACAAAGCTTTTAAAGCTTCCTGATGTTCAGGAAGTGAACTATCATA
. : . : . : . : . : . :
rJMSF015B06- AGTAATGTCTATACGGCTCTGTAGTCTTTGCA
rJMFF008I23- AGTAATGTCTATACGGCTCTGTAGTCTTTGCAAGCATTCCT
JMFF044K12+ AGTAATGTCTATACGGCTCTGTAGTCTTTGCAAGCAT---TCCTGTGAAGGTGTCAAATC
JMFF008I23+ AGTAATGTCTATACGGCTCTGTAGTCTTTGCAAGCAT---TCCTGTGAAGGTGTCAAATC
JMFF021A03+ AGTAATGTCTATACGGCTCTGTAGTCTTTGCAAGCATTCCTCCTGTGAAGGTGTCAAATC
____________________________________________________________
consensus AGTAATGTCTATACGGCTCTGTAGTCTTTGCAAGCATTCCTCCTGTGAAGGTGTCAAATC
. : . : . : . : . : . :
JMFF044K12+ AAATGATAGACGAGCATCACTTTCTCTTCTTTGAACACAAACACATGAAAGCCCTCTGCC
JMFF008I23+ AAATGATAGACGAGCATCACTTTCTCTTCTTTGAACACAAACACATGAAAGCCCTCTGCC
JMFF019P01+ TTGAACACAAACACATGAAAGCCCTCTGCC
JMFF021A03+ AAATGATAGACGAGCATCACTTTCTCTTCTTTGAACACAAACACATGAAAGCCCTCTGCC
____________________________________________________________
consensus AAATGATAGACGAGCATCACTTTCTCTTCTTTGAACACAAACACATGAAAGCCCTCTGCC
. : . : . : . : . : . :
JMFF044K12+ AAGCCATGCAGCTGACCCTGCCACAACCTCAGAAGAAGAATGGCAAGTGTTGCTCCTGTC
JMFF008I23+ AAGCCATGCAGCTGACCCTGCCACAACCTCAGAAGAAGAATGGCAAGTGTTGCTCCTGTC
JMFF019P01+ AAGCCATGCAGCTGACCCTGCCACAACCTCAGAAGAAGAATGGCAAGTGTTGCTCCTGTC
JMFF021A03+ AAGCCATGCAGCTGACCCTGCCACAACCTCAGAAGAAGAATGGCAAGTGTTGCTCCTGTC
____________________________________________________________
consensus AAGCCATGCAGCTGACCCTGCCACAACCTCAGAAGAAGAATGGCAAGTGTTGCTCCTGTC
. : . : . : . : . : . :
JMFF044K12+ GAGGCTCTGCGATATCCTCCTCACCGCCACAAACGATCCTCCACCGCCTCTTTCCTCCAT
JMFF008I23+ GAGGCTCTGCGATATCCTCCTCACCGCCACAAACGATCCTCCACCGCCTCTTTCCTCCAT
JMFF019P01+ GAGGCTCTGCGATATCCTCCTCACCGCCACAAACGATCCTCCACCGCCTCTTTCCTCCAT
JMFF021A03+ GAGGCTCTGCGATATCCTCCTCACCGCCACAAACGATCCTCCACCGCCTCTTTCCTCCAT
____________________________________________________________
consensus GAGGCTCTGCGATATCCTCCTCACCGCCACAAACGATCCTCCACCGCCTCTTTCCTCCAT
. : . : . : . : . : . :
JMFF044K12+ TCTCCCCACACCACACTGTCGTCTTCCGCCGTCACACTCGTCTCTCTAAGTCTCCCGCGA
JMFF008I23+ TCTCCCCACACCACACTGTCGTCTTCCGCCGTCACACTCGTCTCTCTAAGTCTCCCGCGA
JMFF019P01+ TCTCCCCACACCACACTGTCGTCTTCCGCCGTCACACTCGTCTCTCTAAGTCTCCCGCGA
JMSF015B06+ TCCGCCGTCACACTCGTCTCTCTAAGTCTCCCGCGA
JMFF021A03+ TCTCCCCACACCACACTGTCGTCTTCCGCCGTCACACTCGTCTCTCTAAGTCTCCCGCGA
____________________________________________________________
consensus TCTCCCCACACCACACTGTCGTCTTCCGCCGTCACACTCGTCTCTCTAAGTCTCCCGCGA
. : . : . : . : . : . :
JMFF044K12+ TCGAAGCAATGCGAACAGTCCAGATTGCAGCGGATCGAATTGCAGACGCGAATTCATCAG
JMFF008I23+ TCGAAGCAATGCGAACAGTCCAGATTGCAGCGGATCGAATTGCAGACGCGAATTCATCAG
JMFF019P01+ TCGAAGCAATGCGAACAGTCCAGATTGCAGCGGATCGAATTGCAGACGCGAATTCATCAG
JMSF015B06+ TCGAAGCAATGCGAACAGTCCAGATTGCAGCGGATCGAATTGCAGACGCGAATTCATCAG
JMFF021A03+ TCGAAGCAATGCGAACAGTCCAGATTGCAGCGGATCGAATTGCAGACGCGAATTCATCAG
____________________________________________________________
consensus TCGAAGCAATGCGAACAGTCCAGATTGCAGCGGATCGAATTGCAGACGCGAATTCATCAG
. : . : . : . : . : . :
JMFF044K12+ AGGTGAACTCGACGAGAAATCCGCGGCTCCTTCCTTTCCAGTTCAATTCTCCCGAAATAG
JMFF008I23+ AGGTGAACTCGACGAGAAATCCGCGGCTCCTTCCTTTCCAGTTCAATTCTCCCGAAATAG
JMFF019P01+ AGGTGAACTCGACGAGAAATCCGCGGCTCCTTCCTTTCCAGTTCAATTCTCCCGAAATAG
JMSF015B06+ AGGTGAACTCGACGAGAAATCCGCGGCTCCTTCCTTTCCAGTTCAATTCTCCCGAAATAG
JMFF021A03+ AGGTGAACTCGACGAGAAATCCGCGGCTCCTTCCTTTCCAGTTCAATTCTCCCGAAATAG
____________________________________________________________
consensus AGGTGAACTCGACGAGAAATCCGCGGCTCCTTCCTTTCCAGTTCAATTCTCCCGAAATAG
. : . : . : . : . : . :
JMFF044K12+ CTCCCCTCTGTATCGCGTTAGAGACGCGCGAGTTCGCCCTCGTGATTCCTATTTTCCGGC
JMFF008I23+ CTCCCCTCTGTATCGCGTTAGAGACGCGCGAGTTCGCCCTCGTGATTCCTATTTTCCGGC
JMFF019P01+ CTCCCCTCTGTATCGCGTTAGAGACGCGCGAGTTCGCCCTCGTGATTCCTATTTTCCGGC
JMSF015B06+ CTCCCCTCTGTATCGCGTTAGAGACGCGCGAGTTCGCCCTCGTGATTCCTATTTTCCGGC
JMFF021A03+ CTCCCCTCTGTATCGCGTTAGAGACGCGCGAGTTCGCCCTCGTGATTCCTATTTTCCGGC
____________________________________________________________
consensus CTCCCCTCTGTATCGCGTTAGAGACGCGCGAGTTCGCCCTCGTGATTCCTATTTTCCGGC
. : . : . : . : . : . :
JMFF044K12+ GAAATTTTTGATTTGTACAGTTCTGCGCTGGGGAAATC
JMFF008I23+ GAAATTTTTGATTTGTACAGTTCTGCGCTGGGGAAATC
JMFF019P01+ GAAATTTTTGATTTGTACAGTTCTGCGCTGGGGAAATCTCTGAGTAGATTTGGTAGGCGG
JMSF015B06+ GAAATTTTTGATTTGTACAGTTCTGCGCTGGGGAAATCTCTGAGTAGATTTGGTAGGCGG
JMFF021A03+ GAAATTTTTGATTTGTACAGTTCTGCGCTGGGGAAATCTCTGAGTAGATTTGGTAGGCGG
____________________________________________________________
consensus GAAATTTTTGATTTGTACAGTTCTGCGCTGGGGAAATCTCTGAGTAGATTTGGTAGGCGG
. : . : . : . : . : . :
JMFF019P01+ AGAAGATATGGGAGGAGCTGCGCTGTTCTGCACTTCTGCTCTACTGTTTCCCT
JMSF015B06+ AGAAGATATGGGAGGAGCTGCGCTGTTCTGCACTTCTGCTCTACTGTTTCCCT
JMFF021A03+ AGAAGATATGGGAGGAGCTGCGCTGTTCTGCACTTCTGCTCTACTGTTTCCCTGTTAGTT
____________________________________________________________
consensus AGAAGATATGGGAGGAGCTGCGCTGTTCTGCACTTCTGCTCTACTGTTTCCCTGTTAGTT