Contig 003150:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020F14Sequence571003150 (4)gb|ADL63117.1|2e-97sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [691009860 (2)gb|ADL63117.1|3e-66sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [
JMFF038B19Sequence478003150 (4)gb|ADL63117.1|2e-80sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [
JMFF050P20Sequence606003150 (4)gb|ADL63117.1|1e-106sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [592009860 (2)gb|ADL63117.1|1e-35sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [
JMFS158E02Sequence413003150 (4)gb|ADL63117.1|3e-45sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [

Alignment

This contig is upended


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JMFF038B19+                                                       TTGCCCATCCAGTCCG
                      ____________________________________________________________
consensus                                                         TTGCCCATCCAGTCCG
 
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JMFF038B19+           TGTCGAAGAGGAAGAAAGGGAACCATGCAATCCAGTTGAGGCACGTGACGAGCAGCAGGA
                      ____________________________________________________________
consensus             TGTCGAAGAGGAAGAAAGGGAACCATGCAATCCAGTTGAGGCACGTGACGAGCAGCAGGA
 
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JMFF038B19+           TCCACATGGACCTCGGGAGGTCCCTCAGAGCNCCGAATATTTCCCCGAAGAACGGCAACT
JMFS158E02+                                                                GGCAACT
                      ____________________________________________________________
consensus             TCCACATGGACCTCGGGAGGTCCCTCAGAGCNCCGAATATTTCCCCGAAGAACGGCAACT
 
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JMFF038B19+           TCGATTTCTCCGACGGCAACTTTTCGTCGTCGTCGTCTACTTCGTCCACCTCCTTCGAAA
JMFS158E02+           TCGATTTCTCCGACGGCAACTTTTCGTCGTCGTCGTCTACTTCGTCCACCTCCTTCGAAA
                      ____________________________________________________________
consensus             TCGATTTCTCCGACGGCAACTTTTCGTCGTCGTCGTCTACTTCGTCCACCTCCTTCGAAA
 
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JMFF038B19+           GCTCGTGCTCGCGGACCGTGCTCAGGGCCAGGGTAGTGAGGGACAGTAACAGAGCGGCGG
JMFS158E02+           GCTCGTGCTCGCGGACCGTGCTCAGGGCCAGGGTAGTGAGGGACAGTAACAGAGCGGCGG
                      ____________________________________________________________
consensus             GCTCGTGCTCGCGGACCGTGCTCAGGGCCAGGGTAGTGAGGGACAGTAACAGAGCGGCGG
 
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JMFF038B19+           AGATGAAGAAACAGCTCTTCAGGTTGGCGCAGTAAACGTCGCAGGCTTTGGTCTTCGAGA
JMFS158E02+           AGATGAAGAAACAGCTCTTCAGGTTGGCGCAGTAAACGTCGCAGGCTTTGGTCTTCGAGA
                      ____________________________________________________________
consensus             AGATGAAGAAACAGCTCTTCAGGTTGGCGCAGTAAACGTCGCAGGCTTTGGTCTTCGAGA
 
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JMFF038B19+           ACGGAAACACTTTGTGGAGGCCGGACCACGAGCCGGCGGCGTAACCCAGGATGTTTCCGA
JMFS158E02+           ACGGAAACACTTTGTGGAGGCCGGACCACGAGCCGGCGGCGCCCCCCAGGATGTTTCCGA
                      ____________________________________________________________
consensus             ACGGAAACACTTTGTGGAGGCCGGACCACGAGCCGGCGGCGTCCCCCAGGATGTTTCCGA
 
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JMFF038B19+           TCGCCATGAAGAAGGAGAAGAATGAGTTCGCCGTTCTCATCCTCTTCGCTCTCCCGCCGG
JMFS158E02+           TCGCCATGAAGAAGGAGAAGAATGAGTTCGCCGTTCTCATCCTCTTCGCTCTCCCGCCGG
JMFF050P20+                                                                 CGCCGG
                      ____________________________________________________________
consensus             TCGCCATGAAGAAGGAGAAGAATGAGTTCGCCGTTCTCATCCTCTTCGCTCTCCCGCCGG
 
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JMFF038B19+           ACAGATCCGCCAGTAATGCTCTACATGGGCCCTGTAACATA                   
JMFS158E02+           ACAGATCCGCCAGTAATGCTCTACATGGGCCCTGTAACATATTAATTGCGA         
JMFF050P20+           ACAGATCCGCCAGTAATGCTCTACATGGGCCCTGTAACATATTATTTGCGACGTCGAGAA
JMFF020F14+                                        CCCTGTAACATATTATTTGCGACGTCGAGAA
                      ____________________________________________________________
consensus             ACAGATCCGCCAGTAATGCTCTACATGGGCCCTGTAACATATTATTTGCGACGTCGAGAA
 
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JMFF050P20+           TCCAGAAGCCAACGACGAAAACAGCAATAGCGCGTGGCTTAATCATTTTGCCAACGGGGT
JMFF020F14+           TCCAGAAGCCAACGACGAAAACAGCAATAGCGCGTGGCTTAATCATTTTGCCAACGGGGT
                      ____________________________________________________________
consensus             TCCAGAAGCCAACGACGAAAACAGCAATAGCGCGTGGCTTAATCATTTTGCCAACGGGGT
 
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JMFF050P20+           CGCCGGAGGCGTGGCCGATGTCGGCGGCGAAGCCAATGAGGAAGACGGCAATGGTGACGA
JMFF020F14+           CGCCGGAGGCGTGGCCGATGTCGGCGGCGAAGCCAATGAGGAAGACGGCAATGGTGACGA
                      ____________________________________________________________
consensus             CGCCGGAGGCGTGGCCGATGTCGGCGGCGAAGCCAATGAGGAAGACGGCAATGGTGACGA
 
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JMFF050P20+           GGGAGGCGCCGGCGGCGATGAAGGGGCGGCGGCGGCCGAAGCGGGAGGTGCAGTTGTCGC
JMFF020F14+           GGGAGGCGCCGGCGGCGATGAAGGGGCGGCGGCGGCCGAAGCGGGAGGTGCAGTTGTCGC
                      ____________________________________________________________
consensus             GGGAGGCGCCGGCGGCGATGAAGGGGCGGCGGCGGCCGAAGCGGGAGGTGCAGTTGTCGC
 
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JMFF050P20+           TGTAATAGCCGACCATGGGCTGCACAATCATGCCGGAGATAGGGCCGCAGAGCCAGATTA
JMFF020F14+           TGTAATAGCCGACCATGGGCTGCACAATCATGCCGGAGATAGGGCCGCAGAGCCAGATTA
                      ____________________________________________________________
consensus             TGTAATAGCCGACCATGGGCTGCACAATCATGCCGGAGATAGGGCCGCAGAGCCAGATTA
 
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JMFF050P20+           AGGGGGCGTATTGGTGCTTGATGCCCAAGAGCTGCACGTAAGGGGTGAGGAGCGAGAGCT
JMFF020F14+           AGGGGGCGTATTGGTGCTTGATGCCCAAGAGCTGCACGTAAGGGGTGAGGAGCGAGAGCT
                      ____________________________________________________________
consensus             AGGGGGCGTATTGGTGCTTGATGCCCAAGAGCTGCACGTAAGGGGTGAGGAGCGAGAGCT
 
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JMFF050P20+           GGATGGCCCACCCGAATTGGACGCCGGCGGCGATCGCCGCCACCATTATGATCTTCCACA
JMFF020F14+           GGATGGCCCACCCGAATTGGACGCCGGCGGCGATCGCCGCCACCATTATGATCTTCCACA
                      ____________________________________________________________
consensus             GGATGGCCCACCCGAATTGGACGCCGGCGGCGATCGCCGCCACCATTATGATCTTCCACA
 
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JMFF050P20+           GCCGCGTCTGCGGCGGCGCCGCCGGAGCGGCTGCTTGGTGGAGTTGCAGAGAGGATTTGT
JMFF020F14+           GCCGCGTCTGCGGCGGCGCCGCCGGAGCGGCTGCTTGGTGGAGTTGCAGAGAGGATTTGT
                      ____________________________________________________________
consensus             GCCGCGTCTGCGGCGGCGCCGCCGGAGCGGCTGCTTGGTGGAGTTGCAGAGAGGATTTGT
 
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JMFF050P20+           TTGTTTGTTTGGTTTTCATGCCACCGTTCTCCATCGCAATT                   
JMFF020F14+           TTGTTTGTTTGGTTTTCATGCCACCGTTCTCCATCGCAATTCTCTCTCTTTCAAAAGATT
                      ____________________________________________________________
consensus             TTGTTTGTTTGGTTTTCATGCCACCGTTCTCCATCGCAATTCTCTCTCTTTCAAAAGATT
 
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JMFF020F14+           CTTAGTTTCTATCTATTATAGATACAAAAGTGTGAGGATTTTTCTGGTGAAGTTTGTATT
                      ____________________________________________________________
consensus             CTTAGTTTCTATCTATTATAGATACAAAAGTGTGAGGATTTTTCTGGTGAAGTTTGTATT