Contig 003149:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF039F01+                                                     CTGATCATTTACAATCCC
JMFF020E24+                                                       GATCATTTACAATCCC
                      ____________________________________________________________
consensus                                                       CTGATCATTTACAATCCC
 
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JMFF039F01+           CATCCTCTTGATGCATAAACATATCAGAGATGGTACTGACAACAACATCACCACTTCTAA
JMFF020E24+           CATCCTCTTGATGCATAAACATATCAGAGATGGTACTGACAACAACATCACCACTTCTAA
                      ____________________________________________________________
consensus             CATCCTCTTGATGCATAAACATATCAGAGATGGTACTGACAACAACATCACCACTTCTAA
 
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JMSF009G04+                        AGTAGACTGTGACAGAACTGTTGTAGTAGTGACCACCAGGACTTGAC
JMFF039F01+           AATCCCCAAGGCCAGTAGACTGTGACAGAACTGTTGTAGTAGTGACCACCAGGACTTGAC
JMFF020E24+           AATCCCCAAGGCCAGTAGACTGTGACAGAACTGTTGTAGTAGTGACCACCAGGACTTGAC
                      ____________________________________________________________
consensus             AATCCCCAAGGCCAGTAGACTGTGACAGAACTGTTGTAGTAGTGACCACCAGGACTTGAC
 
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JMSF009G04+           ATAGTACACCTTTTCTTCTTCAAAAATATTGCGATATTTCTTCACTTCTTCCTTTAAAAT
JMFF039F01+           ATAGTACACCTTTTCTTCTTCAAAAATATTGCGATATTTCTTCACTTCTTCCTTTAAAAT
JMFF020E24+           ATAGTACACCTTTTCTTCTTCAAAAATATTGCGATATTTCTTCACTTCTTCCTTTAAAAT
                      ____________________________________________________________
consensus             ATAGTACACCTTTTCTTCTTCAAAAATATTGCGATATTTCTTCACTTCTTCCTTTAAAAT
 
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JMSF009G04+           ATTGACATGTATATAGGTTCCCCTATCTCACTGGATGACGAAGATAACTGCATCAATAGT
JMFF039F01+           ATTGACATGTATATAGGTTCCCCTATCTCACTGGATGACGAAGATAACTGCATCAATAGT
JMFF020E24+           ATTGACATGTATATAGGTTCCCCTATCTCACTGGATGACGAAGATAACTGCATCAATAGT
                      ____________________________________________________________
consensus             ATTGACATGTATATAGGTTCCCCTATCTCACTGGATGACGAAGATAACTGCATCAATAGT
 
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JMSF009G04+           CATCTGGGTGGGGAGGAAGAATAGAACAGCTCACCAAGGTAATACTGAGAATCCTCTCTT
JMFF039F01+           CATCTGGGTGGGGAGGAAGAATAGAACAGCTCACCAAGGTAATACTGAGAATCCTCTCTT
JMFF020E24+           CATCTGGGTGGGGAGGAAGAATAGAACAGCTCACCAAGGTAATACTGAGAATCCTCTCTT
                      ____________________________________________________________
consensus             CATCTGGGTGGGGAGGAAGAATAGAACAGCTCACCAAGGTAATACTGAGAATCCTCTCTT
 
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JMSF009G04+           GCTTTTTGATGCTTTTTTTACTCCAGAACCTGTCTACAACCTCAAATTTGATAAATTCAT
JMFF039F01+           GCTTTTTGATGCTTTTTTTACTCCAGAACCTGTCTACAACCTCAAATTTGATAAATTCAT
JMFF020E24+           GCTTTTTGATGCTTTTTTTACTCCAGAACCTGTCTACAACCTCAAATTTGATAAATTCAT
                      ____________________________________________________________
consensus             GCTTTTTGATGCTTTTTTTACTCCAGAACCTGTCTACAACCTCAAATTTGATAAATTCAT
 
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JMSF009G04+           AGCTAACATTCTTGGTTGTAAGAGTGAGACTGTGAGAGAGATACCAGCGTTGATGTCCGG
JMFF039F01+           AGCTAACATTCTTGGTTGTAAGAGTGAGACTGTGAGAGAGATACCAGCGTTGATGTCCGG
JMFF020E24+           AGCTAACATTCTTGGTTGTAAGAGTGAGACTGTGAGAGAGATACCAGCGTTGATGTCCGG
                      ____________________________________________________________
consensus             AGCTAACATTCTTGGTTGTAAGAGTGAGACTGTGAGAGAGATACCAGCGTTGATGTCCGG
 
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JMSF009G04+           AAACGAAGAAGATGGAGATGAACCCCTTACACACGGAGGACAACGGTCTATACCC     
JMFF039F01+           AAACGAAGAAGATGGAGATGAACCCCTTACACACGGAGGACAACGGTCTATACCCACGCT
JMFF020E24+           AAACGAAGAAGATGGAGATGAACCCCTTACACACGGAGGACAACGGTCTATACCCACGCT
                      ____________________________________________________________
consensus             AAACGAAGAAGATGGAGATGAACCCCTTACACACGGAGGACAACGGTCTATACCCACGCT
 
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JMFF039F01+           TGCTCATCTGTCCGTAGATGATAAGAGAGAGAGA                          
JMFF020E24+           TGCTCATCTGTCCGTAGATGATAAGAGAGAGAGATCATTGAAGAACGACGAAAACGAAAT
                      ____________________________________________________________
consensus             TGCTCATCTGTCCGTAGATGATAAGAGAGAGAGATCATTGAAGAACGACGAAAACGAAAT