Contig 003143:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006J13Sequence327003143 (3)ref|XP_011097618.1|8e-34PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like772012236 (4)ref|XP_010319762.1|1e-97PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial isof
JMFF018E04Sequence573003143 (3)ref|XP_011097618.1|2e-93PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like830012236 (4)ref|XP_009779142.1|4e-96PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Nic
JMSF019A06Sequence331003143 (3)ref|XP_011097618.1|3e-40PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like774012236 (4)ref|XP_010319762.1|4e-117PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial isof

Alignment

This contig is upended


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JMFF018E04+                                      CTTAAGGCAATCATACCCAGGTTACCACTATAT
                      ____________________________________________________________
consensus                                        CTTAAGGCAATCATACCCAGGTTACCACTATAT
 
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JMFF018E04+           AAGCGTGCCATCAACGTTGCCAATTCATTCGCTTCAGTCCCTGAATTTACAAAATATACA
                      ____________________________________________________________
consensus             AAGCGTGCCATCAACGTTGCCAATTCATTCGCTTCAGTCCCTGAATTTACAAAATATACA
 
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JMFF018E04+           ACCTTTAGGTTTCCAGGCATTTTAGCTGCTAATGCCTCAGCATAATCAGCTATTGCATGG
                      ____________________________________________________________
consensus             ACCTTTAGGTTTCCAGGCATTTTAGCTGCTAATGCCTCAGCATAATCAGCTATTGCATGG
 
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JMFF018E04+           TGCAGATATATGGTAGTAGCATGTTGAAGAAGCTTGTTTTGTTCTGTGATGGCATCTAAG
                      ____________________________________________________________
consensus             TGCAGATATATGGTAGTAGCATGTTGAAGAAGCTTGTTTTGTTCTGTGATGGCATCTAAG
 
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JMSF019A06+                                            ACTATTCCAGCAAAAGCATCTAGATAC
JMFF006J13+                                            ACTATTCCAGCAAAAGCATNTAGATAC
JMFF018E04+           ATGTCTGGATGGCAGTGACCACAGGACAAAGTAACTATTCCAGCAAAAGCATCTAGATAC
                      ____________________________________________________________
consensus             ATGTCTGGATGGCAGTGACCACAGGACAAAGTAACTATTCCAGCAAAAGCATCTAGATAC
 
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JMSF019A06+           CGCTTTCCATTCTCATCAAACAAATATTGCATCTTCCCTTCAACAATGTTGAGGGGCTTC
JMFF006J13+           CGCTTTCCATTNTCATCAAACAAATATTGCATNTTCCCTTCAACAATGTTGAGGGGCTTN
JMFF018E04+           CGCTTTCCATTCTCATCAAACAAATATTGCATCTTCCCTTCAACAATGTTGAGGGGCTTC
                      ____________________________________________________________
consensus             CGCTTTCCATTCTCATCAAACAAATATTGCATCTTCCCTTCAACAATGTTGAGGGGCTTC
 
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JMSF019A06+           TGGTAGTAGTAAAAGAGAGAGGGCCCCAAGTACTTGTTCCTCTTCTCCAGAACCTCATCG
JMFF006J13+           TGGTAGTAGTAAAAGAGAGAGGGCCCCAAGTACTTGTTCCTNTTNTCCAGAACCTCATCG
JMFF018E04+           TGGTAGTAGTAAAAGAGAGAGGGCCCCAAGTACTTGTTCCTCTTCTCCAGAACCTCATCG
                      ____________________________________________________________
consensus             TGGTAGTAGTAAAAGAGAGAGGGCCCCAAGTACTTGTTCCTCTTCTCCAGAACCTCATCG
 
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JMSF019A06+           GCCAAGGGTCCGTTGTACGGCCTCGGCTGGTAGTCAAACGGCGGCAGCTCCGGCGGAGAC
JMFF006J13+           GCCAAGGGTCCGTTGTACGGCCTCGGCTGGTAGTCAAACGGCGGCAGCTCCGGCGGAGAC
JMFF018E04+           GCCAAGGGTCCGTTGTACGGCCTCGGCTGGTAGTCAAACGGCGGCAGCTCCGGCGGAGAC
                      ____________________________________________________________
consensus             GCCAAGGGTCCGTTGTACGGCCTCGGCTGGTAGTCAAACGGCGGCAGCTCCGGCGGAGAC
 
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JMSF019A06+           GTCGCGAAACCGCGCGGAGCCCCAATCCAGCCGCATTTTGGCCGGAGCGATCTCAGGAGG
JMFF006J13+           GTCGCGAAACCGCGCGGAGCCCCAATCCAGCCGCATTTTGGCCGGAGCGATCTCAGGAGG
JMFF018E04+           GTCGCGAAACCGCGCGGAGCCCCAATCCAGCCGCATTTTGGCCGGAGCGATCTCAGGAGG
                      ____________________________________________________________
consensus             GTCGCGAAACCGCGCGGAGCCCCAATCCAGCCGCATTTTGGCCGGAGCGATCTCAGGAGG
 
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JMSF019A06+           GTTTTGCTCAACAGTTTCCTCTGTAACGCCATCGCTTACGCTTAGCCGCCGATCAC    
JMFF006J13+           GTTTTGCTCAACAGTTTCCTCTGTAACGCCATCGCTTACGCTTAGCCGCCGATCAC    
JMFF018E04+           GTTTTGCTCAACAGTTTCCTCTGTAACGCCATCGCTTACGCTTAGCCGCCGATCACGATT
                      ____________________________________________________________
consensus             GTTTTGCTCAACAGTTTCCTCTGTAACGCCATCGCTTACGCTTAGCCGCCGATCACGATT