Contig 003133:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004O20Sequence520003133 (5)ref|XP_011082365.1|3e-64PREDICTED: transcription factor MYC4-like [Sesamum indicum]624005385 (4)ref|NP_001288107.1|1e-28uncharacterized protein LOC101261048 [Solanum lycopersicum] gb|AIC63945.1| MYC1
JMFF009I10Sequence542003133 (5)gb|AAQ14332.1|AF283507_14e-48MYC2 [Catharanthus roseus]
JMFF016H12Sequence604003133 (5)gb|AAQ14332.1|AF283507_12e-47MYC2 [Catharanthus roseus]753005385 (4)ref|XP_009609942.1|6e-43PREDICTED: transcription factor MYC2-like [Nicotiana tomentosiformis]
JMFF038N07Sequence421003133 (5)gb|AAQ14332.1|AF283507_12e-29MYC2 [Catharanthus roseus]768005385 (4)ref|XP_009780487.1|3e-62PREDICTED: transcription factor MYC2-like [Nicotiana sylvestris]
JMSF034D18Sequence631003133 (5)gb|AAQ14332.1|AF283507_13e-56MYC2 [Catharanthus roseus]733005385 (4)gb|ADH04267.1|2e-80MYC1a transcription factor [Nicotiana tabacum] gb|ADU60101.1| MYC2b transcriptio

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF004O20+                                                        AACTGAGGTGTTGAC
                      ____________________________________________________________
consensus                                                          AACTGAGGTGTTGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF004O20+           ATNGACGCCGGGAAGACGACGTCGGCTCAGTGAGCCAGAGCGCCGACGGGTCGTTCTCCG
                      ____________________________________________________________
consensus             ATNGACGCCGGGAAGACGACGTCGGCTCAGTGAGCCAGAGCGCCGACGGGTCGTTCTCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF004O20+           GCGGCGCGGCCCACGAGGCGGAGCCCGAGATCGAACCCATATCGGGATTATTGAAATTAA
                      ____________________________________________________________
consensus             GCGGCGCGGCCCACGAGGCGGAGCCCGAGATCGAACCCATATCGGGATTATTGAAATTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF004O20+           ACAAAACCCTAACCTTGTTAATCAAATCAAAGCTCTGGAGAATCAAGTCAGTGGATCCGA
                      ____________________________________________________________
consensus             ACAAAACCCTAACCTTGTTAATCAAATCAAAGCTCTGGAGAATCAAGTCAGTGGATCCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF004O20+           GCTCAACGACGCCGTTTGAGGACGGGATACACACCATGGTCCGGAGCCCGAAGGTCTGCG
                      ____________________________________________________________
consensus             GCTCAACGACGCCGTTTGAGGACGGGATACACACCATGGTCCGGAGCCCGAAGGTCTGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF004O20+           CTTGCCGGGCGCGCTCGCACGGCGACGACAAGAGCTTATCCTGGCCGGAGATCCAAATCG
                      ____________________________________________________________
consensus             CTTGCCGGGCGCGCTCGCACGGCGACGACAAGAGCTTATCCTGGCCGGAGATCCAAATCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF004O20+           GGCTGGAGCTGCAAAACGCCTGACCCGGGAGCCCCGACCCGTTGATGAAGGAGTGGGTCA
JMSF034D18+                                                                TGGGTCA
                      ____________________________________________________________
consensus             GGCTGGAGCTGCAAAACGCCTGACCCGGGAGCCCCGACCCGTTGATGAAGGAGTGGGTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF004O20+           TGGAAACCAGGAAGAACCACTCAGTATCCGTGACTTCTTCGTCCACGGATTCGTCGGTGG
JMFF009I10+                                                           ATTCGTCGGTGG
JMSF034D18+           TGGAAACCAGGAAGAACCACTCAGTATCCGTGACTTCTTCGTCCACGGATTCGTCGGTGG
JMFF016H12+                                                                   GTGG
                      ____________________________________________________________
consensus             TGGAAACCAGGAAGAACCACTCAGTATCCGTGACTTCTTCGTCCACGGATTCGTCGGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF004O20+           AGGCGGGGCCGGAAATGAGGGAATTCAGCTCCCGGAGAACCTTTTTCCGGTGGGCTTGTT
JMFF009I10+           AGGCGGGGCCGGAAATGAGGGAATTCAGCTCCCGGAGAACCTTTTTCCGGTGGGCTTGTT
JMSF034D18+           AGGCGGGGCCGGAAATGAGGGAATTCAGCTCCCGGAGAACCTTTTTCCGGTGGGCTTGTT
JMFF016H12+           AGGCGGGGCCGGAAATGAGGGAATTCAGCTCCCGGAGAACCTTTTTCCGGTGGGCTTGTT
                      ____________________________________________________________
consensus             AGGCGGGGCCGGAAATGAGGGAATTCAGCTCCCGGAGAACCTTTTTCCGGTGGGCTTGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF004O20+           CGGCGGGGGACGACGCCGGCCTATT                                   
JMFF009I10+           CGGCGGGGGACGACGCCGGCCTATTCCGCTTCCCTTTGTCCTCCTCCCCTTTGTAGTACC
JMSF034D18+           CGGCGGGGGACGACGCCGGCCTATTCCGCTTCCCTTTGTCCTCCTCCCCTTTGTAGTACC
JMFF038N07+                                                            TTTGTAGTACC
JMFF016H12+           CGGCGGGGGACGACGCCGGCCTATTCCGCTTCCCTTTGTCCTCCTCCCCTTTGTAGTACC
                      ____________________________________________________________
consensus             CGGCGGGGGACGACGCCGGCCTATTCCGCTTCCCTTTGTCCTCCTCCCCTTTGTAGTACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009I10+           CATCGCCCCACCCCAACAACGACGGCCCGGCGAAATCCACGACGGACGCCTGCCAGAAAA
JMSF034D18+           CATCGCCCCACCCCAACAACGACGGCCCGGCGAAATCCACGACGGACGCCTGCCAGAAAA
JMFF038N07+           CATCGCCCCACCCCAACAACGACGGCCCGGCGAAATCCACGACGGACGCCTGCCAGAAAA
JMFF016H12+           CATCGCCCCACCCCAACAACGACGGCCCGGCGAAATCCACGACGGACGCCTGCCAGAAAA
                      ____________________________________________________________
consensus             CATCGCCCCACCCCAACAACGACGGCCCGGCGAAATCCACGACGGACGCCTGCCAGAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009I10+           TCGCGTAGGTCCACGTCTCCCGCGCGCCGTCGATCAGGGTTTGGAGGCGCTGCTGGAGCG
JMSF034D18+           TCGCGTAGGTCCACGTCTCCCGCGCGCCGTCGATCAGGGTTTGGAGGCGCTGCTGGAGCG
JMFF038N07+           TCGCGTAGGTCCACGTCTCCCGCGCGCCGTCGATCAGGGTTTGGAGGCGCTGCTGGAGCG
JMFF016H12+           TCGCGTAGGTCCACGTCTCCCGCGCGCCGTCGATCAGGGTTTGGAGGCGCTGCTGGAGCG
                      ____________________________________________________________
consensus             TCGCGTAGGTCCACGTCTCCCGCGCGCCGTCGATCAGGGTTTGGAGGCGCTGCTGGAGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009I10+           TCTCCTGATTAAGGACGATCGACGAAGCGGCGGAGACGGCGGAGGAGGCGGAGGAGTGAT
JMSF034D18+           TCTCCTGATTAAGGACGATCGACGAAGCGGCGGAGACGGCGGAGGAGGCGGAGGAGTGAT
JMFF038N07+           TCTCCTGATTAAGGACGATCGACGAAGCGGCGGAGACGGCGGAGGAGGCGGAGGAGTGAT
JMFF016H12+           TCTCCTGATTAAGGACGATCGACGAAGCGGCGGAGACGGCGGAGGAGGCGGAGGAGTGAT
                      ____________________________________________________________
consensus             TCTCCTGATTAAGGACGATCGACGAAGCGGCGGAGACGGCGGAGGAGGCGGAGGAGTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009I10+           GATGATGATGATGAGGAGGAGGAGGAGCCATCGCAGTGGGTGGGGTCCAGAACGCCGGCG
JMSF034D18+           GATGATGATGATGAGGAGGAGGAGGAGCCATCGCAGTGGGTGGGGTCCAGAACGCCGGCG
JMFF038N07+           GATGATGATGATGAGGAGGAGGAGGAGCCATCGCAGTGGGTGGGGTCCAGAACGCCGGCG
JMFF016H12+           GATGATGATGATGAGGAGGAGGAGGAGCCATCGCAGTGGGTGGGGTCCAGAACGCCGGCG
                      ____________________________________________________________
consensus             GATGATGATGATGAGGAGGAGGAGGAGCCATCGCAGTGGGTGGGGTCCAGAACGCCGGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009I10+           CGTGATCGGAGGAAATGAACGCCTCCATCATGGAAGCGTTGTCGTCGGAGGTGTCGGCCG
JMSF034D18+           CGTGATCGGAGGAAATGAACGCCTCCATCATGGAAGCGTTGTCGTCGGAGGTGTCGGCCG
JMFF038N07+           CGTGATCGGAGGAAATGAACGCCTCCATCATGGAAGCGTTGTCGTCGGAGGTGTCGGCCG
JMFF016H12+           CGTGATCGGAGGAAATGAACGCCTCCATCATGGAAGCGTTGTCGTCGGAGGTGTCGGCCG
                      ____________________________________________________________
consensus             CGTGATCGGAGGAAATGAACGCCTCCATCATGGAAGCGTTGTCGTCGGAGGTGTCGGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009I10+           AGGGGGCCCACACATTCATCGCCGGCAGCCGGTAGTCCGTCATTCCATAAACAGAAAAAG
JMSF034D18+           AGGGGGCCCACACATTCATCGCCGGCAGCCGGTAGTCCGTCATTCCATAAACAGAAAAAG
JMFF038N07+           AGGGGGCCCACACATTCATCGCCGGCAGCCGGTAGTCCGTCATTCCATAAACAGAAAAAG
JMFF016H12+           AGGGGGCCCACACATTCATCGCCGGCAGCCGGTAGTCCGTCATTCCATAAACAGAAAAAG
                      ____________________________________________________________
consensus             AGGGGGCCCACACATTCATCGCCGGCAGCCGGTAGTCCGTCATTCCATAAACAGAAAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF009I10+           AGTGAGAGAAAGGAGCGAGGTTTTACGGAGAGAGAGAGAGATAGAGAGAT          
JMSF034D18+           AGTGAGAGAAAGGAGCGAGGTTTTACGGAGAGAGAGAGAGATAGAGAGAT          
JMFF038N07+           AGTGAGAGAAAGGAGCGAGGTTTTACGGAGAGAGAGAGAGATAGAGAGAT          
JMFF016H12+           AGTGAGAGAAAGGAGCGAGGTTTTACGGAGAGAGAGAGAGATAGAGAGATAGAGAGAGAG
                      ____________________________________________________________
consensus             AGTGAGAGAAAGGAGCGAGGTTTTACGGAGAGAGAGAGAGATAGAGAGATAGAGAGAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF016H12+           AGGCGGAGAGATAGAGTGTTTAAAGGCGGCTATGGTGGAGTGGGAGGGAGTGTTTGGTTT
                      ____________________________________________________________
consensus             AGGCGGAGAGATAGAGTGTTTAAAGGCGGCTATGGTGGAGTGGGAGGGAGTGTTTGGTTT