Contig 003131:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016A09Sequence622003131 (5)gb|KCW87025.1|7e-125hypothetical protein EUGRSUZ_B03574 [Eucalyptus grandis]775003131 (5)gb|KCW50320.1|1e-137hypothetical protein EUGRSUZ_J00099 [Eucalyptus grandis]
JMFN003P13Sequence549003131 (5)ref|XP_008245892.1|4e-82PREDICTED: 60S ribosomal protein L10 [Prunus mume]
JMSF020J07Sequence659003131 (5)ref|XP_008782699.1|4e-141PREDICTED: 60S ribosomal protein L10 [Phoenix dactylifera]773003131 (5)gb|KCW50320.1|3e-138hypothetical protein EUGRSUZ_J00099 [Eucalyptus grandis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF016A09- AATGTATAAAAACCTCAACTCA
                      ____________________________________________________________
consensus AATGTATAAAAACCTCAACTCA
 
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rJMFF016A09- AAATGCAGTCCACAAGGGATTCTAAATAGACAGAAGATCAAGAATCAAAATCTTGTTTAA
                      ____________________________________________________________
consensus AAATGCAGTCCACAAGGGATTCTAAATAGACAGAAGATCAAGAATCAAAATCTTGTTTAA
 
. : . : . : . : . : . :
rJMFF016A09- CTCAAAACTGGAAAACTAGATGTGTGCTAAGGTGGAGGCTTTGTGCTTCTTAGGTGCTTA
                      ____________________________________________________________
consensus CTCAAAACTGGAAAACTAGATGTGTGCTAAGGTGGAGGCTTTGTGCTTCTTAGGTGCTTA
 
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rJMSF020J07- AAAAATGCTTTTCCAGGTTTACGGTTTGCAAGCCGTCCATGACATCC
JMFN003P13+ AAAAATGCTTTTCCAGGTTTACGGTTTGCAAGCCGTCCATGACATCC
rJMFF016A09- AGCTGTTAGAGGCAAAAATGCTTTTCCAGGTTTACGGTTTGCAAGCCGTCCATGACATCC
JMSF020J07+ TTGCAAGCCGTCCATGACATCC
                      ____________________________________________________________
consensus AGCTGTTAGAGGCAAAAATGCTTTTCCAGGTTTACGGTTTGCAAGCCGTCCATGACATCC
 
. : . : . : . : . : . :
rJMSF020J07- AAGGAGCTTAGCATTGACACCATCAGGTGCAATGCGATTCTCCTTTTTGTAGTTCACATA
JMFN003P13+ AAGGAGCTTAGCATTGACACCATCAGGTGCAATGCGATTCTCCTTTTTGTAGTTCACATA
rJMFF016A09- AAGGAGCTTAGCATCGACACCATCAGGTGCAATGCGATTCTCCTTTTTGTAGTTCACATA
JMSF020J07+ AAGGAGCTTAGCATTGACACCATCAGGTGCAATGCGATTCTCCTTTTTGTAGTTCACATA
JMFF016A09+ TCTCCTTTTTGTAGTTCACATA
                      ____________________________________________________________
consensus AAGGAGCTTAGCATTGACACCATCAGGTGCAATGCGATTCTCCTTTTTGTAGTTCACATA
 
. : . : . : . : . : . :
rJMSF020J07- GTCAGTACGATTGAATTTAGTGAAACCCCATTTCCTGCTCTCAATGATCTTTTGACGACC
JMFN003P13+ GTCAGTACGATTGAATTTAGTGAAACCCCATTTCCTGCTCTCAATGATCTTTTGACGACC
rJMFF016A09- GTCAGTACGATTGAATTTAGTGAAACCCCATTTCCTGCTCTCAATGATCTTTTGACGACC
JMSF020J07+ GTCAGTACGATTGAATTTAGTGAAACCCCATTTCCTGCTCTCAATGATCTTTTGACGACC
JMFF016A09+ GTCAGTACGATTGAATTTAGTGAAACCCCATTTCCTGCTCTCAATGATCTTTTGACGACC
                      ____________________________________________________________
consensus GTCAGTACGATTGAATTTAGTGAAACCCCATTTCCTGCTCTCAATGATCTTTTGACGACC
 
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rJMSF020J07- AGGGAACTTGAACTTTGCACGGCGCAAGGCCTCCTGTGCATTTTTGCCATTGGGATCCTT
JMFN003P13+ AGGGAACTTGAACTTTGCACGGCGCAAGGCCTCCTGTGCATTTTTGCCATTGGGATCCTT
rJMFF016A09- AGGGAACTTGAACTTTGCACGGCGCAAGGCCTCCTGTGCATTTTTGCCATTGGGATCCTT
JMSF020J07+ AGGGAACTTGAACTTTGCACGGCGCAAGGCCTCCTGTGCATTTTTGCCATTGGGATCCTT
JMFF016A09+ AGGGAACTTGAACTTTGCACGGCGCAAGGCCTCCTGTGCATTTTTGCCATTGGGATCCTT
                      ____________________________________________________________
consensus AGGGAACTTGAACTTTGCACGGCGCAAGGCCTCCTGTGCATTTTTGCCATTGGGATCCTT
 
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rJMSF020J07- GCAACGAACAGAAAGAAGAACCTGTCCAATGGCAACACGGGCACAAGTACCCTGCGGCTT
JMFN003P13+ GCAACGAACAGAAAGAAGAACCTGTCCAATGGCAACACGGGCACAAGTACCCTGCGGCTT
rJMFF016A09- GCAACGAACAGAAAGAAGAACCTGTCCAATGGCAACACGGGCACAAGTACCCTACGGCTT
JMSF020J07+ GCAACGAACAGAAAGAAGAACCTGTCCAATGGCAACACGGGCACAAGTACCCTGCGGCTT
JMFF016A09+ GCAACGAACAGAAAGAAGAACCTGTCCAATGGCAACACGGGCACAAGTACCCTACGGCTT
                      ____________________________________________________________
consensus GCAACGAACAGAAAGAAGAACCTGTCCAATGGCAACACGGGCACAAGTACCCTGCGGCTT
 
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rJMSF020J07- ACCAAAAGCTCCTCTCATGCCAGTTTGGAGCCTATCAGCTCCAGCACAAGACAACATCTT
JMFN003P13+ ACCAAAAGCTCCTCTCATGCCAGTTTGGAGCCTATCAGCTCCAGCACAAGACAACATCTT
rJMFF016A09- ACCAAAAGCTCCTCTCATGCCAGTTTGGAGCCTATCAGCTCCAGCACAAGACAACATCTT
JMSF020J07+ ACCAAAAGCTCCTCTCATGCCAGTTTGGAGCCTATCAGCTCCAGCACAAGACAACATCTT
JMFF016A09+ ACCAAAAGCTCCTCTCATGCCAGTTTGGAGCCTATCAGCTCCAGCACAAGACAACATCTT
                      ____________________________________________________________
consensus ACCAAAAGCTCCTCTCATGCCAGTTTGGAGCCTATCAGCTCCAGCACAAGACAACATCTT
 
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rJMSF020J07- GTTAATACGCAACACATGGAAAGGATGAACCCTGACCCTAAGGTGGAAAGCATCCTTTCC
JMFN003P13+ GTTAATACGCAACACATGGAAAGGATGAACCCTGACCCTAAGGTGGAAAGCA
rJMFF016A09- GTTAATACGCAACACATGGAAAGGATGAACCCTGACCCTAAGGTGGAAAGCATCCTTTCC
JMSF020J07+ GTTAATACGCAACACATGGAAAGGATGAACCCTGACCCTAAGGTGGAAAGCATCCTTTCC
JMFF016A09+ GTTAATACGCAACACATGGAAAGGATGAACCCTGACCCTAAGGTGGAAAGCATCCTTTCC
                      ____________________________________________________________
consensus GTTAATACGCAACACATGGAAAGGATGAACCCTGACCCTAAGGTGGAAAGCATCCTTTCC
 
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rJMSF020J07- TGCGAACTTGGTCATATACTTGTTGCAAGCAATACGTGCTGCTTCAAGTGCCTCACTAGA
rJMFF016A09- TGCGAACTTGGTCATATACTTGTTGCAAGCAATACGTGCTGCTTCAAGTGCCTCACTAGA
JMSF020J07+ TGCGAACTTGGTCATATACTTGTTGCAAGCAATACGTGCTGCTTCAAGTGCCTCACTAGA
JMFF016A09+ TGCGAACTTGGTCATATACTTGTTGCAAGCAATACGTGCTGCTTCAAGTGCCTCACTAGA
                      ____________________________________________________________
consensus TGCGAACTTGGTCATATACTTGTTGCAAGCAATACGTGCTGCTTCAAGTGCCTCACTAGA
 
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rJMSF020J07- CACATTTTCCTTCTCCCAACTGACCAAATGCACACAATAGGGGAATTCATCCACTCCCTT
rJMFF016A09- CACATTTTCCTTCTCCCAACTGACCAAATGCACACAATAGGGGAATTCATCCACTCCCTT
JMSF020J07+ CACATTTTCCTTCTCCCAACTGACCAAATGCACACAATAGGGGAATTCATCCACTCCCTT
JMFF016A09+ CACATTTTCCTTCTCCCAACTGACCAAATGCACACAATAGGGGAATTCATCCACTCCCTT
                      ____________________________________________________________
consensus CACATTTTCCTTCTCCCAACTGACCAAATGCACACAATAGGGGAATTCATCCACTCCCTT
 
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rJMSF020J07- TTTCTTCATCCCCACATCATAGATCCTAATCTTTGAATCCGGCACACCACGGCAGTACCT
rJMFF016A09- TTTCTTCATCCCCACATCATAGATCCTAATCTTTGAATCCGGCACACCACGGCAGTACCT
JMSF020J07+ TTTCTTCATCCCCACATCATAGATCCTAATCTTTGAATCCGGCACACCACGGCAGTACCT
JMFF016A09+ TTTCTTCATCCCCACATCATAGATCCTAATCTTTGAATCCGGCACACCACGGCAGTACCT
                      ____________________________________________________________
consensus TTTCTTCATCCCCACATCATAGATCCTAATCTTTGAATCCGGCACACCACGGCAGTACCT
 
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rJMSF020J07- TGATTTTGGGTAGGGCTTGTTCTT
rJMFF016A09- TGATTTTGGGTANGGCTTGTTCTTAATCTG
JMSF020J07+ TGATTTTGGGTAGGGCTTGTTCTTAATCTGGCGATAACACCTAGCTGGTCTTCTCCCCAT
JMFF016A09+ TGATTTTGGGTAGGGCTTGTTCTTAATCTGGCGATAACACCTAGCTGGTCTTCTCCCCAT
                      ____________________________________________________________
consensus TGATTTTGGGTAGGGCTTGTTCTTAATCTGGCGATAACACCTAGCTGGTCTTCTCCCCAT
 
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JMSF020J07+ G
JMFF016A09+ GACGGCAGGGTCTTCTCCTTAGCTGATCTGTGGCTCCAAGAATGGCTGAAACCCTAACCT
                      ____________________________________________________________
consensus GACGGCAGGGTCTTCTCCTTAGCTGATCTGTGGCTCCAAGAATGGCTGAAACCCTAACCT