Contig 003117:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013M19Sequence587003117 (2)gb|EYU38040.1|4e-74hypothetical protein MIMGU_mgv1a009112mg [Erythranthe guttata] gb|EYU38041.1| hy613003980 (2)ref|XP_006486579.1|2e-53PREDICTED: CMP-sialic acid transporter 4-like isoform X2 [Citrus sinensis]
JMFF032E23Sequence592003117 (2)gb|EYU38040.1|1e-75hypothetical protein MIMGU_mgv1a009112mg [Erythranthe guttata] gb|EYU38041.1| hy617003980 (2)ref|XP_006486579.1|6e-46PREDICTED: CMP-sialic acid transporter 4-like isoform X2 [Citrus sinensis]

Alignment

This contig is upended


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JMFF032E23+                   ATCCACATATGCAAATATGTAATACTGCAGTAAATTCTTGACGAGGTACAGT
JMFF013M19+                        CATATGCAAATATGTAATACTGCAGTAAATTCTTGACGAGGTACAGT
                      ____________________________________________________________
consensus                     ATCCACATATGCAAATATGTAATACTGCAGTAAATTCTTGACGAGGTACAGT
 
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JMFF032E23+           GCAGCGGGAATTGGAAAAACACTAACTTCATCATATGTGGTGCTTAACCTGTTATCATCA
JMFF013M19+           GCAGCGGGAATTGGAAAAACACTAACTTCATCATATGTGGTGCTTAACCTGTTATCATCA
                      ____________________________________________________________
consensus             GCAGCGGGAATTGGAAAAACACTAACTTCATCATATGTGGTGCTTAACCTGTTATCATCA
 
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JMFF032E23+           GTGACACCATCTTTTCTCCAGATTCTCATTAAAGCTACAAGTGATAGTGCACACTTCAAA
JMFF013M19+           GTGACACCATCTTTTCTCCAGATTCTCATTAAAGCTACAAGTGATAGTGCACACTTCAAA
                      ____________________________________________________________
consensus             GTGACACCATCTTTTCTCCAGATTCTCATTAAAGCTACAAGTGATAGTGCACACTTCAAA
 
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JMFF032E23+           GCCTCTACCAAAAAATTTGCAGTTGTAACACTGTACTCATACTTCCCTGCTCTCTTCGAC
JMFF013M19+           GCCTCTACCAAAAAATTTGCAGTTGTAACACTGTACTCATACTTCCCTGCTCTCTTCGAC
                      ____________________________________________________________
consensus             GCCTCTACCAAAAAATTTGCAGTTGTAACACTGTACTCATACTTCCCTGCTCTCTTCGAC
 
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JMFF032E23+           CAGACAATGAGTATTGCTTGAGAACTTGTCAGCACAGTCAATGCAAGTGTGACTATTGAC
JMFF013M19+           CAGACAATGAGTATTGCTTGAGAACTTGTCAGCACAGTCAATGCAAGTGTGACTATTGAC
                      ____________________________________________________________
consensus             CAGACAATGAGTATTGCTTGAGAACTTGTCAGCACAGTCAATGCAAGTGTGACTATTGAC
 
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JMFF032E23+           TTGCGCTTCCACTTAGATCGGTCACCTGAGCCGGCCCCCAATATGGCCACATTATTAATG
JMFF013M19+           TTGCGCTTCCACTTAGATCGGTCACCTGAGCCGGCCCCCAATATGGCCACATTATTAATG
                      ____________________________________________________________
consensus             TTGCGCTTCCACTTAGATCGGTCACCTGAGCCGGCCCCCAATATGGCCACATTATTAATG
 
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JMFF032E23+           GAACCTGAAACAGCTTTCCCGTGTGAGCTCTCAATATCATCATCAACTGCCTCATTTTTG
JMFF013M19+           GAACCTGAAACAGCTTTCCCGTGTGAGCTCTCAATATCATCATCAACTGCCTCATTTTTG
                      ____________________________________________________________
consensus             GAACCTGAAACAGCTTTCCCGTGTGAGCTCTCAATATCATCATCAACTGCCTCATTTTTG
 
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JMFF032E23+           TCCTGATCTTTAATTCTCCTGTACTCCATTGATGAATGCTGGAAAAATCTTCAAACGTCT
JMFF013M19+           TCCTGATCTTTAATTCTCCTGTACTCCATTGATGAATGCTGGAAAAATCTTCAAACGTCT
                      ____________________________________________________________
consensus             TCCTGATCTTTAATTCTCCTGTACTCCATTGATGAATGCTGGAAAAATCTTCAAACGTCT
 
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JMFF032E23+           CACTCTTTTTTAACCAACTAGTCGAAAGCATGCACTGGGGAGTTGCTGCTTCACGACGGC
JMFF013M19+           CACTCTTTTTTAACCAACTAGTCGAAAGCATGCACTGGGGAGTTGCTGCTTCACGACGGC
                      ____________________________________________________________
consensus             CACTCTTTTTTAACCAACTAGTCGAAAGCATGCACTGGGGAGTTGCTGCTTCACGACGGC
 
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JMFF032E23+           CGACTCATTAGTAAGGCGCTGCTACTGCTTGGTGAAGAATGAAGAGTGGAGTTTGCTTGC
JMFF013M19+           CGACTCATTAGTAAGGCGCTGCTACTGCTTGGTGAAGAATGAAGAGTGGAGTTTGCTTGC
                      ____________________________________________________________
consensus             CGACTCATTAGTAAGGCGCTGCTACTGCTTGGTGAAGAATGAAGAGTGGAGTTTGCTTGC