Contig 003089:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF025O01-                                                    TCAGCAGTGACTGCACAT
                      ____________________________________________________________
consensus                                                       TCAGCAGTGACTGCACAT
 
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rJMSF025O01-          CCAACCACCTTAATAAGGAAACATGTTTCTATCACAACAAAGAACCACCACCTTAAAAAG
                      ____________________________________________________________
consensus             CCAACCACCTTAATAAGGAAACATGTTTCTATCACAACAAAGAACCACCACCTTAAAAAG
 
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rJMSF025O01-          AAACGAATAGTTCACAAATCACAAGGGAGTTACGAGAAACAGCAGCTGCATATAAAACTA
                      ____________________________________________________________
consensus             AAACGAATAGTTCACAAATCACAAGGGAGTTACGAGAAACAGCAGCTGCATATAAAACTA
 
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rJMSF025O01-          GCCCGCAATATCAGATAAGCAAGAAAACCCCGTTTCTTAGTATTTGGCTAAAAGTCTAGT
                      ____________________________________________________________
consensus             GCCCGCAATATCAGATAAGCAAGAAAACCCCGTTTCTTAGTATTTGGCTAAAAGTCTAGT
 
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rJMSF025O01-          ACACAACCACATAGCGGTTTAAGGAAGCAATTGAGTTATCTTACACGATCAGATTCTCGG
JMSF025O01+                           GTTTAAGGAAGCAATTGAGTTATCTTACACGATCAGATTCTCGG
                      ____________________________________________________________
consensus             ACACAACCACATAGCGGTTTAAGGAAGCAATTGAGTTATCTTACACGATCAGATTCTCGG
 
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rJMSF025O01-          TCCAGAGGATACTGTATTGATGGAAATCCTCAGAGGGATCAAACCACAAGCCATATCGCT
JMSF025O01+           TCCAGAGGATACTGTATTGATGGAAATCCTCAGAGGGATCAAACCACAAGCCATATCGCT
                      ____________________________________________________________
consensus             TCCAGAGGATACTGTATTGATGGAAATCCTCAGAGGGATCAAACCACAAGCCATATCGCT
 
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rJMSF025O01-          CCTCCCTGCCCCTGCTGGTGCTTCCATTGCCATAAATATTAGTCTGAATCCTCCAGTCTT
JMSF025O01+           CCTCCCTGCCCCTGCTGGTGCTTCCATTGCCATAAATATTAGTCTGAATCCTCCAGTCTT
JMFF008P17+                             TGCTTCCATTGCCATAAATATTAGTCTGAATCCTCCAGTCTT
                      ____________________________________________________________
consensus             CCTCCCTGCCCCTGCTGGTGCTTCCATTGCCATAAATATTAGTCTGAATCCTCCAGTCTT
 
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rJMSF025O01-          TGCCTCTAATGTTCCCCAAGAACTCAAAGTCAATCTCGTCATGGTTCTTTTGGAACATCT
JMSF025O01+           TGCCTCTAATGTTCCCCAAGAACTCAAAGTCAATCTCGTCATGGTTCTTTTGGAACATCT
JMFF008P17+           TGCCTNTAATGTTCCCCAAGAACTCAAAGTCAATCTCGTCATGGTTCTTTTGGAACATCT
                      ____________________________________________________________
consensus             TGCCTCTAATGTTCCCCAAGAACTCAAAGTCAATCTCGTCATGGTTCTTTTGGAACATCT
 
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rJMSF025O01-          CGGCGTTCGACATATAAAACGCCA--ACCACACCGGCCGTGTAATCCGAAGGTAGTTTAA
JMSF025O01+           CGGCGTTCGACATATAAAACGCCA--ACCACACCGGCCGTGTAATCCGAAGGTAGTTTAA
JMFF008P17+           CGGCGTTCGACATATAAAACGCCACCACCACACCGGCCGTGTAATCCGAAGGTAGTTTAA
                      ____________________________________________________________
consensus             CGGCGTTCGACATATAAAACGCCA--ACCACACCGGCCGTGTAATCCGAAGGTAGTTTAA
 
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rJMSF025O01-          TGGAGGCGCTGAAGAACCCATGACTGTAAAGGTCATGAGACAGAAACCCAGAACCTGTTC
JMSF025O01+           TGGAGGCGCTGAAGAACCCATGACTGTAAAGGTCATGAGACAGAAACCCAGAACCTGTTC
JMFF008P17+           TGGAGGCGCTGAAGAACCCATGACTGTAAAGGTCATGAGACAGAAACCCAGAACCTGTTC
                      ____________________________________________________________
consensus             TGGAGGCGCTGAAGAACCCATGACTGTAAAGGTCATGAGACAGAAACCCAGAACCTGTTC
 
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rJMSF025O01-          TTTGGTCTAGAGAAAGATGAACAGACTTTCCATCTTCAAGGACTCTAAGATTAGCATCTC
JMSF025O01+           TTTGGTCTAGAGAAAGATGAACAGACTTTCCATCTTCAAGGACTCTAAGATTAGCATCTC
JMFF008P17+           TTTGGTCTAGAGAAAGATGAACAGACTTTCCATCTTCAAGGACTNTAAGATTAGCATCTC
                      ____________________________________________________________
consensus             TTTGGTCTAGAGAAAGATGAACAGACTTTCCATCTTCAAGGACTCTAAGATTAGCATCTC
 
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rJMSF025O01-          CAAAGAGATGAGTGTAGCCTTCGTCAAATGAAACGATTGGCAGATTTCTTGAAAACCCAG
JMSF025O01+           CAAAGAGATGAGTGTAGCCTTCGTCAAATGAAACGATTGGCAGATTTCTTGAAAACCCAG
JMFF008P17+           CAAAGAGATGAGTGTAGCCTTCGTCAAATGAAACGATTGGCAGATTTCTTGAAAACCCAG
                      ____________________________________________________________
consensus             CAAAGAGATGAGTGTAGCCTTCGTCAAATGAAACGATTGGCAGATTTCTTGAAAACCCAG
 
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rJMSF025O01-          AGACCAGTAAAGCAACAGAGCACAACACAAAA                            
JMSF025O01+           AGACCAGTAAAGCAACAGAGCACAACACAAAAATTCTCAGATGAAAAATCACCATTTTTT
JMFF008P17+           AGACCAGTAAAGCAACAGAGCACAACACAAAAATTCTCAGATGAAAAATCACCATTTTTT
                      ____________________________________________________________
consensus             AGACCAGTAAAGCAACAGAGCACAACACAAAAATTCTCAGATGAAAAATCACCATTTTTT
 
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JMSF025O01+           TTTGGGTTCTTTCGATCAGTTATGGAGGTGAAGAGTGAAGGGATTGTTCTGGGTGTTGGT
JMFF008P17+           TTTGGGTTCTTTCGATCAGTTATGGAGGTGAAGAGTGAAGGGATTGTTCTGGGTGTTGGT
                      ____________________________________________________________
consensus             TTTGGGTTCTTTCGATCAGTTATGGAGGTGAAGAGTGAAGGGATTGTTCTGGGTGTTGGT
 
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JMSF025O01+           TCTTACAAGCACAGAGAATCGTATTGTACAAGAAAAACTGAAAGAGAGGTGGTGGCTAT 
JMFF008P17+           TCTTACAAGCACAGAGAATCGTATTGTACAAGAAAAACTGAAAGAGAGGTGGTGGCTATT
                      ____________________________________________________________
consensus             TCTTACAAGCACAGAGAATCGTATTGTACAAGAAAAACTGAAAGAGAGGTGGTGGCTATT