Contig 003088:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008O11Sequence549003088 (8)emb|CDP03931.1|5e-53unnamed protein product [Coffea canephora]765001182 (8)ref|XP_009777271.1|3e-108PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]
JMFF017F16Sequence576003088 (8)ref|XP_009777271.1|1e-61PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]765001182 (8)ref|XP_009777271.1|3e-108PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]
JMFF023A11Sequence499003088 (8)emb|CDP03931.1|2e-45unnamed protein product [Coffea canephora]683001182 (8)emb|CDP03931.1|4e-91unnamed protein product [Coffea canephora]
JMFF028O12Sequence468003088 (8)ref|XP_009777271.1|7e-41PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]622001182 (8)emb|CDP03931.1|1e-80unnamed protein product [Coffea canephora]
JMFF029C01Sequence455003088 (8)emb|CDP03931.1|4e-44unnamed protein product [Coffea canephora]767001182 (8)emb|CDP03931.1|3e-89unnamed protein product [Coffea canephora]
JMFF040K21Sequence498003088 (8)ref|XP_009777271.1|4e-45PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]661001182 (8)emb|CDP03931.1|3e-91unnamed protein product [Coffea canephora]
JMFF041L16Sequence639003088 (8)ref|XP_009777271.1|1e-72PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]592001182 (8)emb|CDP03931.1|6e-70unnamed protein product [Coffea canephora]
JMSF033L13Sequence662003088 (8)ref|XP_009610543.1|9e-92PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana tomentosifor713001182 (8)ref|XP_009777271.1|2e-102PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF041L16+                         AAACGTCGAAGAAGAAGAAAGAATTGGTCCGGTCCAGGAACTGTAA
JMSF033L13+              GAAATACGGGTAAACGTCGAAGAAGAAGAAAGAATTGGTCCGGTCCAGGAACTGTAA
                      ____________________________________________________________
consensus                GAAATACGGGTAAACGTCGAAGAAGAAGAAAGAATTGGTCCGGTCCAGGAACTGTAA
 
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JMFF041L16+           CAGCGGTTTAAAAACCGAACCGGTGAGGTCGGACCGGAAAGCCCCGCTGGACGGCGGATA
JMSF033L13+           CAGCGGTTTAAAAACCGAACCGGTGAGGTCGGACCGGAAAGCCCCGCTGGACGGCGGATA
JMFF017F16+                                        CGGACCGGAAAGCCCCGCTGGACGGCGGATA
                      ____________________________________________________________
consensus             CAGCGGTTTAAAAACCGAACCGGTGAGGTCGGACCGGAAAGCCCCGCTGGACGGCGGATA
 
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JMFF041L16+           AGACGCCTCCAACATATCCATGGCTAACGGCGTCCCCACCTTGATCTTCCTCAGCCCGAA
JMSF033L13+           AGACGCCTCCAACATATCCATGGCTAACGGCGTCCCCACCTTGATCTTCCTCAGCCCGAA
JMFF023A11+                                                         TTCCTCAGCCCGAA
JMFF017F16+           AGACGCCTCCAACATATCCATGGCTAACGGCGTCCCCACCTTGATCTTCCTCAGCCCGAA
JMFF040K21+                                                          TCCTCAGCCCGAA
JMFF008O11+                                                            CTCAGCCCGAA
                      ____________________________________________________________
consensus             AGACGCCTCCAACATATCCATGGCTAACGGCGTCCCCACCTTGATCTTCCTCAGCCCGAA
 
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JMFF041L16+           TTTCTTAACGGATCGCCGGATTTTCCGCATCGCCGGCACGAGCTGAAACCACGTGGTGTT
JMSF033L13+           TTTCTTAACGGATCGCCGGATTTTCCGCATCGCCGGCACGAGCTGAAACCACGTGGTGTT
JMFF023A11+           TTTCTTAACGGATCGCCGGATTTTCCGCATCGCCGGCACGAGCTGAAACCACGTGGTGTT
JMFF028O12+                            GGATTTTCCGCATCGCCGGCACGAGCTGAAACCACGTGGTGTT
JMFF017F16+           TTTCTTAACGGATCGCCGGATTTTCCGCATCGCCGGCACGAGCTGAAACCACGTGGTGTT
JMFF040K21+           TTTCTTAACGGATCGCCGGATTTTCCGCATCGCCGGCACGAGCTGAAACCACGTGGTGTT
JMFF008O11+           TTTCTTAACGGATCGCCGGATTTTCCGCATCGCCGGCA--AGCTGAAACCACGTGGTGTT
                      ____________________________________________________________
consensus             TTTCTTAACGGATCGCCGGATTTTCCGCATCGCCGGCACGAGCTGAAACCACGTGGTGTT
 
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JMFF041L16+           CGGCGGGTTGCTCAGGATTTCGTTCCCGACGAGGAGGTACCGGATCTTCGTCTCGCCGTA
JMSF033L13+           CGGCGGGTTGCTCAGGATTTCGTTCCCGACGAGGAGGTACCGGATCTTCGTCTCGCCGTA
JMFF023A11+           CGGCGGGTTGCTCAGGATTTCGTTCCCGACGAGGAGGTACCGGATCTTCGTCTCGCCGTA
JMFF028O12+           CGGCGGGTTGCTCAGGATTTCGTTCCCGACGAGGAGGTACCGGATCTTCGTCTCGCCGTA
JMFF017F16+           CGGCGGGTTGCTCAGGATTTCGTTCCCGACGAGGAGGTACCGGATCTTCGTCTCGCCGTA
JMFF040K21+           CGGCGGGTTGCTCAGGATTTCGTTCCCGACGAGGAGGTACCGGATCTTCGTCTCGCCGTA
JMFF029C01+                                    CCGACGAGGAGGTACCGGATCTTCGTCTCGCCGTA
JMFF008O11+           CGGCGGGTTGCTCAGGATTTCGTTCCCGACGAGGAGGTACCGGATCTTCGTCTCGCCGTA
                      ____________________________________________________________
consensus             CGGCGGGTTGCTCAGGATTTCGTTCCCGACGAGGAGGTACCGGATCTTCGTCTCGCCGTA
 
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JMFF041L16+           AAACGGGACCACATTGGTCTCCACCCACCGGTCGGCTAAAGCTTGGTCGGAGGAAATGTT
JMSF033L13+           AAACGGGACCACATTGGTCTCCACCCACCGGTCGGCTAAAGCTTGGTCGGAGGAAATGTT
JMFF023A11+           AAACGGGACCACATTGGTCTCCACCCACCGGTCGGCTAAAGCTTGGTCGGAGGAAATGTT
JMFF028O12+           AAACGGGACCACATTGGTCTCCACCCACCGGTCGGCTAAAGCTTGGTCGGAGGAAATGTT
JMFF017F16+           AAACGGGACCACATTGGTCTCCACCCACCGGTCGGCTAAAGCTTGGTCGGAGGAAATGTT
JMFF040K21+           AAACGGGACCACATTGGTCTCCACCCACCGGTCGGCTAAAGCTTGGTCGGAGGAAATGTT
JMFF029C01+           AAACGGGACCACATTGGTCTCCACCCACCGGTCGGCTAAAGCTTGGTCGGAGGAAATGTT
JMFF008O11+           AAACGGGACCACATTGGTCTCCACCCACCGGTCGGCTAAAGCTTGGTCGGAGGAAATGTT
                      ____________________________________________________________
consensus             AAACGGGACCACATTGGTCTCCACCCACCGGTCGGCTAAAGCTTGGTCGGAGGAAATGTT
 
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JMFF041L16+           GGGGATAATCTCGTTGGGAACCATGACCGACACTTGAACACCGGAGTTCCCGAGAGCTCT
JMSF033L13+           GGGGATAATCTCGTTGGGAACCATGACCGACACTTGAACATCGGAGTTCCCGAGAGCTCT
JMFF023A11+           GGGGATAATCTCGTTGGGAACCATGACCGACACTTGAACATCGGAGTTCCCGAGAGCTCT
JMFF028O12+           GGGGATAATCTCGTTGGGAACCATGACCGACACTTGAACATCGGAGTTCCCGAGAGCTCT
JMFF017F16+           GGGGATAATCTCGTTGGGAACCATGACCGACACTTGAACATCGGAGTTCCCGAGAGCTCT
JMFF040K21+           GGGGATAATCTCGTTGGGAACCATGACCGACACTTGAACACCGGAGTTCCCGAGAGCTCT
JMFF029C01+           GGGGATAATCTCGTTGGGAACCATGACCGACACTTGAACATCGGAGTTCCCGAGAGCTCT
JMFF008O11+           GGGGATAATCTCGTTGGGAACCATGACCGACACTTGAACATCGGAGTTCCCGAGAGCTCT
                      ____________________________________________________________
consensus             GGGGATAATCTCGTTGGGAACCATGACCGACACTTGAACATCGGAGTTCCCGAGAGCTCT
 
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JMFF041L16+           GAGGATTTTCGGGTTGGCATCGTAGATCTTGACCCGCTTCGCCTTTAAGCCATGGATGAG
JMSF033L13+           GAGGATTTTCGGGTTGGCATCGTAGATCTTGACCCGCTTCGCCTTTAAGCCATGGATGAG
JMFF023A11+           GAGGATTTTCGGGTTGGCATCGTAGATCTTGACCCGCTTCGCCTTTAAGCCATGGATGAG
JMFF028O12+           GAGGATTTTCGGGTTGGCATCGTAGATCTTGACCCGCTTCGCCTTTAAGCCATGGATGAG
JMFF017F16+           GAGGATTTTCGGGTTGGCATCGTAGATCTTGACCCGCTTCGCCTTTAAGCCATGGATGAG
JMFF040K21+           GAGGATTTTCGGGTTNGCATCGTAGATCTTGACCCGCTTCGCCTTTAAGCCATGGATGAG
JMFF029C01+           GAGGATTTTCGGGTTGGCATCGTAGATCTTGACCCGCTTCGCCTTTAAGCCATGGATGAG
JMFF008O11+           GAGGATTTTCGGGTTGGCATCGTAGATCTTGACCCGCTTCGCCTTTAAGCCATGGATGAG
                      ____________________________________________________________
consensus             GAGGATTTTCGGGTTGGCATCGTAGATCTTGACCCGCTTCGCCTTTAAGCCATGGATGAG
 
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JMFF041L16+           --CTGCAGATCGTGATGGTGTGGGAAGGTTGTTGCCCAGTTGACCGTAGCATATTCCGAC
JMSF033L13+           CTCTGCAGATCGTGATGGTGTGGGAAGGTTGTTGCCCAGTTGACCGTAGCATATTCCGAC
JMFF023A11+           --CTGCAGATCGTGATGGTGTGGGAAGGTTGTTGCCCAGTTGACCGTAGCATATTCCGAC
JMFF028O12+           --CTGCAGATCGTGATGGTGTGGGAAGGTTGTTGCCCAGTTGACCGTAGCATATTCCGAC
JMFF017F16+           --CTGCAGATCGTGATGGTGTGGGAAGGTTGTTGCCCAGTTGACCGTAGCATATTCCGAC
JMFF040K21+           --CTGCAGATCGTGATGGTGTGGGAAGGTTGTTGCCCAGTTGACCGTAGCATATTCCGAC
JMFF029C01+           CTCTGCAGATCGTGATGGTGTGGGAAGGTTGTTGCCCAGTTGACCGTAGCATATTCCGAC
JMFF008O11+           CTCTGCAGATCGTGATGGTGTGGGAAGGTTGTTGCCCAGTTGACCGTAGCATATTCCGAC
                      ____________________________________________________________
consensus             --CTGCAGATCGTGATGGTGTGGGAAGGTTGTTGCCCAGTTGACCGTAGCATATTCCGAC
 
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JMFF041L16+           CGTAGCTGAGATATCTGCGCCGGAAAAAGATGGCAGGGCCAATAGAGGAAAGAGAAAAAG
JMSF033L13+           CGTAGCTGAGATATCTGCGCCGGAAAAAGATGGCAGGGCCAATAGAGGAAAGAGAAAAAG
JMFF023A11+           CGTAGCTGAGATATCTGCGCCGGAAAAAGATGGCAGGGCCAATAGAGGAAAGAGAAAAAG
JMFF028O12+           CGTAGCTGAGATATCTGCGCCGGAAAAAGATGGCAGGGCCAATAGAGGAAAGAGAAAAAG
JMFF017F16+           CGTAGCTGAGATATCTGCGCCGGAAAAAGATGGCAGGGCCAATAGAGGAAAGAGAAAAAG
JMFF040K21+           CGTAGCTGAGATATCTGCGCCGGAAAAAGATGGCAGGGCCAATAGAGGAAAGAGAAAAAG
JMFF029C01+           CGTAGCTGAGATATCTGCGCCGGAAAAAGATGGCAGGGCCAATAGAGGAAAGAGAAAAAG
JMFF008O11+           CGTAGCTGAGATATCTGCGCCGGAAAAAGATGGCAGGGCCAATAGAGGAAAGAGAAAAAG
                      ____________________________________________________________
consensus             CGTAGCTGAGATATCTGCGCCGGAAAAAGATGGCAGGGCCAATAGAGGAAAGAGAAAAAG
 
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JMFF041L16+           GAGAGAAACTAAACCCATAACTTAATTTTTTGGCAAGAAAAGGAATTATAAATTC     
JMSF033L13+           GAGAGAAACTAAACCCATAACTTAATTTTTTGGCAAGAAAAGGAATTATAAATTCCCACC
JMFF023A11+           GAGAGAAACTAAACCCATAACTTAATTTTTTGGCAAGAAAAGGAATTATAAATTCCCACC
JMFF028O12+           GAGAGAAACTAAACCCATAACTTAATTTTTTGGCAAGAAAAGGAATTATAAATTCCCACC
JMFF017F16+           GAGAGAAACTAAACCCATAACTTAATTTTTTGGCAAGAAAAGGAATTATAAATTCCCACC
JMFF040K21+           GAGAGAAACTAAACCCATAACTTAATTTTTTGGCAAGAAAAGGAATTATAAATTCCCACC
JMFF029C01+           GAGAGAAACTAAACCCATAACTTAATTTTTTGGCAAGAAAAGGAATTATAAATTCCCACC
JMFF008O11+           GAGAGAAACTAAACCCATAACTTAATTTTTTGGCAAGAAAAGGAATTATAAATTCCCACC
                      ____________________________________________________________
consensus             GAGAGAAACTAAACCCATAACTTAATTTTTTGGCAAGAAAAGGAATTATAAATTCCCACC
 
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JMSF033L13+           GGAC                                                        
JMFF023A11+           GGACATC                                                     
JMFF028O12+           GGACATC                                                     
JMFF017F16+           GGACATC                                                     
JMFF040K21+           GGACATC                                                     
JMFF029C01+           GGACATCAAACAATCAAATACTCCGTGATATATAAATGAATGAACATGTAGAAGTGTATT
JMFF008O11+           GGACATCAAACAATCAAATACTCCGTGATATATAAATGAATGAACATGTAGAAGTGTATT
                      ____________________________________________________________
consensus             GGACATCAAACAATCAAATACTCCGTGATATATAAATGAATGAACATGTAGAAGTGTATT