Contig 003086:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008I14Sequence576003086 (3)emb|CDO99037.1|7e-05unnamed protein product [Coffea canephora]183021234
JMFS032F12Sequence564003086 (3)
JMFS054B06Sequence635003086 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS054B06+ TGGTGGTGAGGGAAC
                      ____________________________________________________________
consensus TGGTGGTGAGGGAAC
 
. : . : . : . : . : . :
JMFS054B06+ AGTGCTCCCATCCATTGTCACAACTCCTTGAAGGGGTGCCATGTATCCCATTGGAGGGAG
                      ____________________________________________________________
consensus AGTGCTCCCATCCATTGTCACAACTCCTTGAAGGGGTGCCATGTATCCCATTGGAGGGAG
 
. : . : . : . : . : . :
JMFS054B06+ CCCAGCAGCAGCAGCACCAGGCCAGCCAGCCAACGACATCGGGGGCAAAGGCAAGGAACT
                      ____________________________________________________________
consensus CCCAGCAGCAGCAGCACCAGGCCAGCCAGCCAACGACATCGGGGGCAAAGGCAAGGAACT
 
. : . : . : . : . : . :
JMFS054B06+ CGATTGATTAGCTTTCTCTGGGTGTTCTTCATTGTTACTTTTAAGCAATGGGTGGTGTTG
                      ____________________________________________________________
consensus CGATTGATTAGCTTTCTCTGGGTGTTCTTCATTGTTACTTTTAAGCAATGGGTGGTGTTG
 
. : . : . : . : . : . :
JMFS054B06+ ATGAAGTTTATTATTATCCCCCCTTTGCAGCTTTTCTAAATCAAGCTGAACACCAATATC
                      ____________________________________________________________
consensus ATGAAGTTTATTATTATCCCCCCTTTGCAGCTTTTCTAAATCAAGCTGAACACCAATATC
 
. : . : . : . : . : . :
JMFS054B06+ CTTGCCCTTACTACTTTCAGTTCTTTTCTGGGGTGGTGCTTCTGCTGCTTCTACAGCTTT
                      ____________________________________________________________
consensus CTTGCCCTTACTACTTTCAGTTCTTTTCTGGGGTGGTGCTTCTGCTGCTTCTACAGCTTT
 
. : . : . : . : . : . :
JMFS054B06+ CATCTTTTTCTCTTCTTCCACAGTCTTTTCTTCCAATTTCTTCTCATCATCCTCATTATG
                      ____________________________________________________________
consensus CATCTTTTTCTCTTCTTCCACAGTCTTTTCTTCCAATTTCTTCTCATCATCCTCATTATG
 
. : . : . : . : . : . :
JMFS054B06+ CTTCACAGTAGCCCTTTCTGGCAAAGACTCAGATGCAATTGTCTTGATATCCATTGTAGC
                      ____________________________________________________________
consensus CTTCACAGTAGCCCTTTCTGGCAAAGACTCAGATGCAATTGTCTTGATATCCATTGTAGC
 
. : . : . : . : . : . :
JMFS054B06+ AGAGCCTTCCCTCTCCGGTGAAGATCTCGACAGTGGAGGCGGTGGAGCCATCAGATCTAT
                      ____________________________________________________________
consensus AGAGCCTTCCCTCTCCGGTGAAGATCTCGACAGTGGAGGCGGTGGAGCCATCAGATCTAT
 
. : . : . : . : . : . :
JMFS054B06+ CTGGATCTTCTTCTCCTCTCTCTGCCCTTCTTCCACCTCTGACACAGTTGAGGGTTTGGT
JMFS032F12+ TCTTCTCCTCTCTCTGCCCTTCTTCCACCTCTGACACAGTTGAGGGTTTGGT
                      ____________________________________________________________
consensus CTGGATCTTCTTCTCCTCTCTCTGCCCTTCTTCCACCTCTGACACAGTTGAGGGTTTGGT
 
. : . : . : . : . : . :
JMFS054B06+ GGTTACAGAATCAGCAGCCATCGCTTTCGAGTCCTCAGCAGAAGCAGAAGGAGGTGATTC
JMFS032F12+ GGTTACAGAATCAGCAGCCATCGCTTTCGAGTCCTCAGCAGAAGCAGAAGGAGGTGATTC
                      ____________________________________________________________
consensus GGTTACAGAATCAGCAGCCATCGCTTTCGAGTCCTCAGCAGAAGCAGAAGGAGGTGATTC
 
. : . : . : . : . : . :
JMFS054B06+ CTTCTTTGGGGAGCTCACCA
JMFS032F12+ CTTCTTTGGGGAGCTCACCACCACCTCCTCCTCCTTTCCGACCAAATCTCCACTTTCCGG
                      ____________________________________________________________
consensus CTTCTTTGGGGAGCTCACCACCACCTCCTCCTCCTTTCCGACCAAATCTCCACTTTCCGG
 
. : . : . : . : . : . :
JMFS032F12+ CACTTGCTCCGTCGCCGGCGGCTTGATTTCCGATTCCACCTTCATCGGCTCCGCCGTCGG
                      ____________________________________________________________
consensus CACTTGCTCCGTCGCCGGCGGCTTGATTTCCGATTCCACCTTCATCGGCTCCGCCGTCGG
 
. : . : . : . : . : . :
JMFS032F12+ ATCTGATTGTGAATTGATTGAACTGCCCAAACCATATAACAAAGAGCCACCACCATTTTG
                      ____________________________________________________________
consensus ATCTGATTGTGAATTGATTGAACTGCCCAAACCATATAACAAAGAGCCACCACCATTTTG
 
. : . : . : . : . : . :
JMFS032F12+ AACTGGTGTTTTCTCGAAATTTGGGGAAGAAGAAACCTCCGTCTTCATCGTCTGATCCAT
                      ____________________________________________________________
consensus AACTGGTGTTTTCTCGAAATTTGGGGAAGAAGAAACCTCCGTCTTCATCGTCTGATCCAT
 
. : . : . : . : . : . :
JMFS032F12+ CTCTGCTTTAGCAGAGGCCGATGATGGGCTGCTCCGAACACTAGCGCTGCCCTGATTCTC
                      ____________________________________________________________
consensus CTCTGCTTTAGCAGAGGCCGATGATGGGCTGCTCCGAACACTAGCGCTGCCCTGATTCTC
 
. : . : . : . : . : . :
JMFS032F12+ CGAAACCTGCCTTGGTCTCTTCCTCTTCGGAGCAACAGCAGAAAAGGGAGCTGCCGACGA
JMFF008I14+ AGGGAGCTGCTGACGA
                      ____________________________________________________________
consensus CGAAACCTGCCTTGGTCTCTTCCTCTTCGGAGCAACAGCAGAAAAGGGAGCTGCTGACGA
 
. : . : . : . : . : . :
JMFS032F12+ GGAGTTCGGCACCGAAGGCAAAATCGCCGGCGACGGAGAGCCGGAAACCGGCGATGAGAC
JMFF008I14+ GGAGTTCAGCACAGAAGGCAAAATCGCCGGCGACGGAGAGCCCGGAACCAACGATGAGAC
                      ____________________________________________________________
consensus GGAGTTCGGCACCGAAGGCAAAATCGCCGGCGACGGAGAGCCGGGAACCGGCGATGAGAC
 
. : . : . : . : . : . :
JMFS032F12+ ACGGGATTTAGTATCGCCACAGGATCTGTTGT
JMFF008I14+ ACATGATTTAGTATCGCCACAAGATCTGTTGTTTACTTCTCTGGTATCGTTCGATGCAAT
                      ____________________________________________________________
consensus ACGTGATTTAGTATCGCCACAGGATCTGTTGTTTACTTCTCTGGTATCGTTCGATGCAAT
 
. : . : . : . : . : . :
JMFF008I14+ TTCTTTCTTCAAAAGAGCTTGCGACTAATCATCAACCCATACAAAACCTCCGCAATCTCA
                      ____________________________________________________________
consensus TTCTTTCTTCAAAAGAGCTTGCGACTAATCATCAACCCATACAAAACCTCCGCAATCTCA
 
. : . : . : . : . : . :
JMFF008I14+ ATCTCCAGCTCCTTAGGGTTGTTGGAAGATGTCGATTTGGACGACGATTTCGGCGGCGGT
                      ____________________________________________________________
consensus ATCTCCAGCTCCTTAGGGTTGTTGGAAGATGTCGATTTGGACGACGATTTCGGCGGCGGT
 
. : . : . : . : . : . :
JMFF008I14+ CTCTCCTTCGACCCATTAGCCTTCTACATCAACAAAAACACTTGTGTCACTCAAAAAACA
                      ____________________________________________________________
consensus CTCTCCTTCGACCCATTAGCCTTCTACATCAACAAAAACACTTGTGTCACTCAAAAAACA
 
. : . : . : . : . : . :
JMFF008I14+ CTCACAATTCCGAGAAGATAAAGCAGAAAATTGAAGGACTAACAACCAATACAAAGAACC
                      ____________________________________________________________
consensus CTCACAATTCCGAGAAGATAAAGCAGAAAATTGAAGGACTAACAACCAATACAAAGAACC
 
. : . : . : . : . : . :
JMFF008I14+ CATAATAAATGCATTTCCCAGAACTCCATCGCCGACGGAGAAAGAGCGTGCGAGGGACAT
                      ____________________________________________________________
consensus CATAATAAATGCATTTCCCAGAACTCCATCGCCGACGGAGAAAGAGCGTGCGAGGGACAT