| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003K17 | Sequence | 529 | 003057 (5) | ref|XP_011078468.1| | 8e-30 | PREDICTED: uncharacterized protein LOC105162195 isoform X1 [Sesamum indicum] | 729 | 011261 (9) | ref|XP_009615900.1| | 8e-95 | PREDICTED: caltractin-like isoform X2 [Nicotiana tomentosiformis] gb|AAF07221.1| |
| JMFF026L02 | Sequence | 562 | 003057 (5) | ref|XP_011078468.1| | 7e-39 | PREDICTED: uncharacterized protein LOC105162195 isoform X1 [Sesamum indicum] | 697 | 003057 (5) | ref|XP_009759305.1| | 2e-74 | PREDICTED: uncharacterized protein LOC104211863 isoform X2 [Nicotiana sylvestri |
| JMSF032A23 | Sequence | 716 | 003057 (5) | ref|XP_011078468.1| | 5e-63 | PREDICTED: uncharacterized protein LOC105162195 isoform X1 [Sesamum indicum] | 736 | 003057 (5) | ref|XP_009759304.1| | 2e-78 | PREDICTED: uncharacterized protein LOC104211863 isoform X1 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
rJMFF026L02- GGAAAT
rJMSF032A23- AAT
____________________________________________________________
consensus GGAAAT
. : . : . : . : . : . :
rJMFF026L02- TGATACTCAAGAATTGTAGACTATAGTACTATACCACAACAAATATGAAGATACAAAGTA
rJMSF032A23- TGATACTCAAGAATTGTAGACTATAGTACTATACCACAACAAATATGAAGATACAAAGTA
____________________________________________________________
consensus TGATACTCAAGAATTGTAGACTATAGTACTATACCACAACAAATATGAAGATACAAAGTA
. : . : . : . : . : . :
rJMFF026L02- AGAAAATACTATAAGCACCTCTGTGAAATGTTCGACTGACCAAAATACTAGAATCCAAGT
rJMSF032A23- AGAAAATACTATAAGCACCTCTGTGAAATGTTCGACTGACCAAAATACTAGAATCCAAGT
____________________________________________________________
consensus AGAAAATACTATAAGCACCTCTGTGAAATGTTCGACTGACCAAAATACTAGAATCCAAGT
. : . : . : . : . : . :
rJMFF026L02- GCAGAGTTCCCTCAAGTTGGTCTGTATCTTCATTATCTTGTTTATCAGTTAATACCGTTT
rJMSF032A23- GCAGAGTTCCCTCAAGTTGGTCTGTATCTTCATTATCTTGTTTATCAGTTAATACCGTTT
____________________________________________________________
consensus GCAGAGTTCCCTCAAGTTGGTCTGTATCTTCATTATCTTGTTTATCAGTTAATACCGTTT
. : . : . : . : . : . :
rJMFF026L02- TTCCTTTCCAACTTTATTGCCTCGTAGGACTTCATTACTTCCTTAAACTGTGCTTCAGCA
rJMSF032A23- TTCCTTTCCAACTTTATTGCCTCGTAGGACTTCATTACTTCCTTAAACTGTGCTTCAGCA
____________________________________________________________
consensus TTCCTTTCCAACTTTATTGCCTCGTAGGACTTCATTACTTCCTTAAACTGTGCTTCAGCA
. : . : . : . : . : . :
rJMFF026L02- ATATCTTTGTTATCTGGATTCTGGTCGGGATGGAACTTCTTCGCCTTCGTCCTAAAGGCA
rJMSF032A23- ATATCTTTGTTATCTGGATTCTGGTCGGGATGGAACTTCTTCGCCTTCGTCCTAAAGGCA
____________________________________________________________
consensus ATATCTTTGTTATCTGGATTCTGGTCGGGATGGAACTTCTTCGCCTTCGTCCTAAAGGCA
. : . : . : . : . : . :
rJMFF026L02- ATCTTTATTTCGTCATCCGTATACGGTTTTGTCCTTGACCTGTCAAGACCCAATACGGAA
rJMSF032A23- ATCTTTATTTCGTCATCCGTATACGGTTTTGTCCTTGACCTGTCAAGACCCAATACGGAA
JMSF032A23+ GGAA
____________________________________________________________
consensus ATCTTTATTTCGTCATCCGTATACGGTTTTGTCCTTGACCTGTCAAGACCCAATACGGAA
. : . : . : . : . : . :
rJMFF026L02- TAGTGATGGGACAAAGAGTAGCCTGTATTTGCCTGATGAGGTTCCCGGAAATTAGTTCCC
rJMSF032A23- TAGTGATGGGACAAAGAGTAGCCTGTATTTGCCTGATGAGGTTCCCGGAAATTAGTTCCC
JMSF032A23+ TAGTGATGGGACAAAGAGTAGCCTGTATTTGCCTGATGAGGTTCCCGGAAATTAGTTCCC
____________________________________________________________
consensus TAGTGATGGGACAAAGAGTAGCCTGTATTTGCCTGATGAGGTTCCCGGAAATTAGTTCCC
. : . : . : . : . : . :
rJMFF026L02- TGGTATCTGTATGATGTATCGGCCTTCCAATACCAATCGTTCCTCTCGAAATGTTGATGA
rJMSF032A23- TGGTATCTGTATGATGTATCGGCCTTCCAATACCAATCGTTCCTCTCGAAATGTTGATGA
JMSF032A23+ TGGTATCTGTATGATGTATCGGCCTTCCAATACCAATCGTTCCTCTCGAAATGTTGATGA
____________________________________________________________
consensus TGGTATCTGTATGATGTATCGGCCTTCCAATACCAATCGTTCCTCTCGAAATGTTGATGA
. : . : . : . : . : . :
rJMFF026L02- TATGCACCGCCATTTTCTGCCCATCTCTCGTAGCTTGTTTTGTATTTATTTCTCTCTCGG
rJMSF032A23- TATGCACCGCCATTTTCTGCCCATCTCTCGTAGCTTGTTTTGTATTTATTTCTCTCTCGG
JMFF026L02+ CCCATCTCTCGTAGCTTGTTTNGTATTTATTTCTCTCTCGG
JMSF032A23+ TATGCACCGCCATTTTCTGCCCATCTCTCGTAGCTTGTTTTGTATTTATTTCTCTCTCGG
____________________________________________________________
consensus TATGCACCGCCATTTTCTGCCCATCTCTCGTAGCTTGTTTTGTATTTATTTCTCTCTCGG
. : . : . : . : . : . :
rJMFF026L02- TTGAAAACATTTTGCATGCGACGTATACGCTCCACTCTCTCCATTTCCTCTTCATACTCC
rJMSF032A23- TTGAAAACATTTTGCATGCGACGTATACGCTCCACTCTCTCCATTTCCTCTTCATACTCC
JMFF026L02+ TTGAAAACATTTTGCATGCGACGTATACGCTCCACTCTCTCCATTTCCTCTTCATACTCC
JMSF032A23+ TTGAAAACATTTTGCATGCGACGTATACGCTCCACTCTCTCCATTTCCTCTTCATACTCC
JMFF003K17+ GTATACGCTCCACTCTCTCCATTTCCTCTTCATACTCC
____________________________________________________________
consensus TTGAAAACATTTTGCATGCGACGTATACGCTCCACTCTCTCCATTTCCTCTTCATACTCC
. : . : . : . : . : . :
rJMFF026L02- TCCCGCATCCTACGATTGTATCTCTTCCACGCTTCCTCCTGAAAGCTTGTCCTGTAAGAA
rJMSF032A23- TCCCGCATCCTACGATTGTATCTCTTCCACGCTTCCTCCTGAAAGCTTGTCCTGTAAGAA
JMFF026L02+ TCCCGCATCCTACGATTGTATCTCTTCCACGCTTCCTCCTGAAAGCTTGTCCTGTAAGAA
JMSF032A23+ TCCCGCATCCTACGATTGTATCTCTTCCACGCTTCCTCCTGAAAGCTTGTCCTGTAAGAA
JMFF003K17+ TCCCGCATCCTACGATTGTATCTCTTCCACGCTTCCTCCTGAAAGCTTGTCCTGTAAGAA
____________________________________________________________
consensus TCCCGCATCCTACGATTGTATCTCTTCCACGCTTCCTCCTGAAAGCTTGTCCTGTAAGAA
. : . : . : . : . : . :
rJMFF026L02- CGACTGCCCTTACGCTTCCACGCTGACTGCG
rJMSF032A23- CGACTGCCCTTACGCTTCCACGCTGACTGCGACCTGCCCAGCTGAGAATAGACCAAATCG
JMFF026L02+ CGACTGCCCTTACGCTTCCACGCTGACTGCGACCTGCCCAGCTGAGAATAGACCAAATCG
JMSF032A23+ CGACTGCCCTTACGCTTCCACGCTGACTGCGACCTGCCCAGCTGAGAATAGACCAAATCG
JMFF003K17+ CGACTGCCCTTACGCTTCCACGCTGACTGCGACCTGCCCAGCTGAGAATAGACCAAATCG
____________________________________________________________
consensus CGACTGCCCTTACGCTTCCACGCTGACTGCGACCTGCCCAGCTGAGAATAGACCAAATCG
. : . : . : . : . : . :
rJMSF032A23- ACAGTCCATC
JMFF026L02+ ACAGTCCATCGCAATTGAGTGACGGCGAAAGTGGTGGCAGTAGCTCCGATTAATCCGAAA
JMSF032A23+ ACAGTCCATCGCAATTGAGTGACGGCGAAAGTGGTGGCAGTAGCTCCGATTAATCCGAAA
JMFF003K17+ ACAGTCCATCGCAATTGAGTGACGGCGAAAGTGGTGGCAGTAGCTCCGATTAATCCGAAA
____________________________________________________________
consensus ACAGTCCATCGCAATTGAGTGACGGCGAAAGTGGTGGCAGTAGCTCCGATTAATCCGAAA
. : . : . : . : . : . :
JMFF026L02+ ACAAGAATGCCCCAAAGTCTCATGTCCTCCTCCGCTTTCGCTGGCCCTTGATGACGGCGA
JMSF032A23+ ACAAGAATGCCCCAAAGTCTCATGTCCTCCTCCGCTTTCGCTGGCCCTTGATGACGGCGA
JMFF003K17+ ACAAGAATGCCCCAAAGTCTCATGTCCTCCTCCGCTTTCGCTGGCCCTTGATGACGGCGA
____________________________________________________________
consensus ACAAGAATGCCCCAAAGTCTCATGTCCTCCTCCGCTTTCGCTGGCCCTTGATGACGGCGA
. : . : . : . : . : . :
JMFF026L02+ AGCTCGTTCGGTTGCGGCCATGGATTGCCCCCATTCTCCTTCCCAGCTTCCTCCTTGCTC
JMSF032A23+ AGCTCGTTCGGTTGCGGCCATGGATTGCCCCCATTCTCCTTCCCAGCTTCCTCCTTGCTC
JMFF003K17+ AGCTCGTTCGGTTGCGGCCATGGATTGCCCCCATTCTCCTTCCCAGCTTCCTCCTTGCTC
____________________________________________________________
consensus AGCTCGTTCGGTTGCGGCCATGGATTGCCCCCATTCTCCTTCCCAGCTTCCTCCTTGCTC
. : . : . : . : . : . :
JMFF026L02+ ATTATTCTTGAATTAATAACGATTCACGGACTCTTCTTCCTCAATCGGGATTGAACCTGG
JMSF032A23+ ATTATTCTTGAATTAATAACGATTCACGGACTCTTCTTCCTCAATCGGGATTGAACCTGG
JMFF003K17+ ATTATTCTTGAATTAATAACGATTCACGGACTCTTCTTCCTCAATCGGGATTGAACCTGG
____________________________________________________________
consensus ATTATTCTTGAATTAATAACGATTCACGGACTCTTCTTCCTCAATCGGGATTGAACCTGG
. : . : . : . : . : . :
JMFF026L02+ AACTCAAATGCAAAGGGTGCAATCATGCTATCCCTAAATTGAAATTGGGTTTTATTTTCT
JMSF032A23+ AACTCAAATGCAAAGGGTGCAATCATGCTATCCCTAAATTGAAATTGGGTTTTATTTTCT
JMFF003K17+ AACTCAAATGCAAAGGGTGCAATCATGCTATCCCTAAATTGAAATTGGGTTTTATTTTCT
____________________________________________________________
consensus AACTCAAATGCAAAGGGTGCAATCATGCTATCCCTAAATTGAAATTGGGTTTTATTTTCT
. : . : . : . : . : . :
JMFF026L02+ TCTATGATTTTTATCGATTCGAGTTGAAAGTCTCTTCTTCA
JMSF032A23+ TCTATGATTTTTATCGATTCGAGTTGAAAGTCTCTTCTTCACCTGTAAAC
JMFF003K17+ TCTATGATTTTTATCGATTCGAGTTGAAAGTCTCTTCTTCACCTGTAAACGAAATCCCCT
____________________________________________________________
consensus TCTATGATTTTTATCGATTCGAGTTGAAAGTCTCTTCTTCACCTGTAAACGAAATCCCCT