| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003D07 | Sequence | 562 | 003053 (6) | ref|XP_004236872.1| | 135 | PREDICTED: uncharacterized protein LOC101247605 [Solanum lycopersicum] | 342 | 009601 (3) | |||
| JMFF022J02 | Sequence | 444 | 003053 (6) | ref|XP_004236872.1| | 138 | PREDICTED: uncharacterized protein LOC101247605 [Solanum lycopersicum] | |||||
| JMFN010E01 | Sequence | 629 | 003053 (6) | ref|XP_004236872.1| | 114 | PREDICTED: uncharacterized protein LOC101247605 [Solanum lycopersicum] | |||||
| JMFN037B02 | Sequence | 366 | 003053 (6) | ref|XP_004236872.1| | 91.7 | PREDICTED: uncharacterized protein LOC101247605 [Solanum lycopersicum] | |||||
| JMSF016H10 | Sequence | 614 | 003053 (6) | ref|XP_004236872.1| | 140 | PREDICTED: uncharacterized protein LOC101247605 [Solanum lycopersicum] | 287 | 009601 (3) | |||
| JMSF043M23 | Sequence | 708 | 003053 (6) | ref|XP_004236872.1| | 140 | PREDICTED: uncharacterized protein LOC101247605 [Solanum lycopersicum] | 109 | 017245 | |||
This contig is upended
. : . : . : . : . : . :
JMFN010E01+ AAGCAAACACAAAGACACCGTCGAGACC
____________________________________________________________
consensus AAGCAAACACAAAGACACCGTCGAGACC
. : . : . : . : . : . :
JMFN010E01+ CAGXXXXXXXXXXXXXXXXXXGAGACAACGTCGAGACCTATAACCCCTGATCGGAGAAGA
JMSF043M23+ GAGACAACGTCGAGACCTATAACCCCTGATCGGAGAAGA
____________________________________________________________
consensus CAGNNNNNNNNNNNNNNNNNNGAGACAACGTCGAGACCTATAACCCCTGATCGGAGAAGA
. : . : . : . : . : . :
JMFN010E01+ GCAAAAAGAATTATGGCTGACATACGAGATTCAAGTAAACAGAATGTTAAGCCATGACAA
JMSF016H10+ CTGACATACGAGATTCAAGTAAACAGAATGTTAAGCCATGACAA
JMSF043M23+ GCAAAAAGAATTATGACTGACATACGAGATTCAAGTAAACAGAATGTTAAGCCATGACAA
____________________________________________________________
consensus GCAAAAAGAATTATGGCTGACATACGAGATTCAAGTAAACAGAATGTTAAGCCATGACAA
. : . : . : . : . : . :
JMFN010E01+ CCGCCTTCTTCTCTTCCTCGAGCTTCTGCAGCTCAGCTAGTCGTTCGGCCCATGCCCTTT
JMSF016H10+ CCGCCTTCTTCTCTTCCTCGAGCTTCTGCAGCTCAGCTAGTCGTTCGGCCCATGCCCTTT
JMSF043M23+ CCGCCTTCTTCTCTTCCTCGAGCTTCTGCAGCTCAGCTAGTCGTTCGGCCCATGCCCTTT
JMFF003D07+ CTAGTCGTTCGGCCCATGCCCTTT
____________________________________________________________
consensus CCGCCTTCTTCTCTTCCTCGAGCTTCTGCAGCTCAGCTAGTCGTTCGGCCCATGCCCTTT
. : . : . : . : . : . :
JMFN010E01+ CCCTTGCTACTGCAGCCATCTTGCGCTCAACTCTTTTAATTAGTTTCTTCTTTTTGGCTT
JMFF022J02+ TT
JMSF016H10+ CCCTTGCTACTGCAGCCATCTTGCGCTCAACTCTTTTAATTAGTTTCTTCTTTTTGGCTT
JMSF043M23+ CCCTTGCTACTGCAGCCATCTTGCGCTCAACTCTTTTAATTAGTTTCTTCTTTTTGGCTT
JMFF003D07+ CCCTTGCTACTGCAGCCATCTTGCGCTCAACTTTTTTAATTAGTTTCTTCTTTTTGGCTT
____________________________________________________________
consensus CCCTTGCTACTGCAGCCATCTTGCGCTCAACTCTTTTAATTAGTTTCTTCTTTTTGGCTT
. : . : . : . : . : . :
JMFN010E01+ CCTGCACCAGAGCCTTGCGCTTCTTCTTTTCAGACACAATAAACGCCTTGCGCTGTTTAA
JMFF022J02+ CCTGCACCAGAGCCTTGCGCTTCTTCTTTTCAGACACAATAAACGCCTTGCGCTGTTTAA
JMFN037B02+ TAA
JMSF016H10+ CCTGCACCAGAGCCTTGCGCTTCTTCTTTTCAGACACAATAAACGCCTTGCGCTGTTTAA
JMSF043M23+ CCTGCACCAGAGCCTTGCGCTTCTTCTTTTCAGACACAATAAACGCCTTGCGCTGTTTAA
JMFF003D07+ CCTGCACC--AGCCTTGCGCTTCTTCTTTTCAGACACAATAAACGCCTTGCGCTGTTTAA
____________________________________________________________
consensus CCTGCACCAGAGCCTTGCGCTTCTTCTTTTCAGACACAATAAACGCCTTGCGCTGTTTAA
. : . : . : . : . : . :
JMFN010E01+ TTCTCTTCTTCTCATTCCTCCGCTTCAGACTCCCTTCATTGGGGTTCTTTGGAGGTTTTG
JMFF022J02+ TTCTCTTCTTCTCATTCCTCCGCTTCAGACTCCCTTCATTGGGGTTCTTTGGAGGTTTTG
JMFN037B02+ TTCTCTTCTTCTCATTCCTCCGCTTCAGACTCCCTTCATTGGGGTTCTTTGGAGGTTTTG
JMSF016H10+ TTCTCTTCTTCTCATTCCTCCGCTTCAGACTCCCTTCATTGGGGTTCTTTGGAGGTTTTG
JMSF043M23+ TTCTCTTCTTCTCATTCCTCCGCTTCAGACTCCCTTCATTGGGGTTCTTTGGAGGTTTTG
JMFF003D07+ TTCTCTTCTTCTCATTCCTCCGCTTCAGACTCCCTTCATTGGGGTTCTTTGGAGGTTTTG
____________________________________________________________
consensus TTCTCTTCTTCTCATTCCTCCGCTTCAGACTCCCTTCATTGGGGTTCTTTGGAGGTTTTG
. : . : . : . : . : . :
JMFN010E01+ GGTCATGGGGCAGTCGCTTAGCCACAACATACAGCCCTGGAGGTTTGGGGATTGGCCTTT
JMFF022J02+ GGTCATGGGGCAGTCGCTTAGCCACAACATACAGCCCTGGAGGTTTGGGGATTGGCCTTT
JMFN037B02+ GGTCATGGGGCAGTCGCTTAACCACAACANACANCCCTGGAGGTTTGGGGGTTGGCCTTT
JMSF016H10+ GGTCATGGGGCAGTCGCTTAGCCACAACATACAGCCCTGGAGGTTTGGGGATTGGCCTTT
JMSF043M23+ GGTCATGGGGCAGTCGCTTAGCCACAACATACAGCCCTGGAGGTTTGGGGATTGGCCTTT
JMFF003D07+ GGTCATGGGGCAGTCGCTTAGCCACAACATACAGCCCTGGAGGTTTGGGGATTGGCCTTT
____________________________________________________________
consensus GGTCATGGGGCAGTCGCTTAGCCACAACATACAGCCCTGGAGGTTTGGGGATTGGCCTTT
. : . : . : . : . : . :
JMFN010E01+ TACGCCGGGACTTGAGGCTTGGTCTTCGCTTCGGATACCGGGTGTCCGTTAAGCTGTGGA
JMFF022J02+ TACGCCGGGACTTGAGGCTTGGTCTTCGCTTCGGATACCGGGTGTCCGTTAAGCTGTGGA
JMFN037B02+ TACGCCGGGACTTGAGGCTTGGTTTTCGCTTCGGATACCGGGTGTCCGTTATGCTGTGGA
JMSF016H10+ TACGCCGGGACTTGAGGCTTGGTCTTCGCTTCGGATACCGGGTGTCCGTTAAGCTGTGGA
JMSF043M23+ TACGCCGGGACTTGAGGCTTGGTCTTCGCTTCGGATACCGGGTGTCCGTTAAGCTGTGGA
JMFF003D07+ TACGCCGGGACTTGAGGCTTGGTCTTCGCTTCGGATACCGGGTGTCCGTTAAGCTGTGGA
____________________________________________________________
consensus TACGCCGGGACTTGAGGCTTGGTCTTCGCTTCGGATACCGGGTGTCCGTTAAGCTGTGGA
. : . : . : . : . : . :
JMFN010E01+ AGGCGGTGGAAGGCGGGATCCATGGCAGCTTAGGGCGGAAGAGCAACCGGAGCTCCGGCG
JMFF022J02+ AGGCGGTGGAAGGCGGGATCCATGGCAGCTTAGGGCGGAAGAGCAACCGGAGCTCCGGCG
JMFN037B02+ AGGCGGTGGAAGGCGGGATGCATGGCAGCTTAGGGCGGAAGAGCAACCGGAGCTCCGGCG
JMSF016H10+ AGGCGGTGGAAGGCGGGATCCATGGCAGCTTAGGGCGGAAGAGCAACCGGAGCTCCGGCG
JMSF043M23+ AGGCGGTGGAAGGCGGGATCCATGGCAGCTTAGGGCGGAAGAGCAACCGGAGCTCCGGCG
JMFF003D07+ AGGCGGTGGAAGGCGGGATCCATGGCAGCTTAGGGCGGAAGAGCAACCGGAGCTCCGGCG
____________________________________________________________
consensus AGGCGGTGGAAGGCGGGATCCATGGCAGCTTAGGGCGGAAGAGCAACCGGAGCTCCGGCG
. : . : . : . : . : . :
JMFN010E01+ ACAGGGAGGGAAAGGTGGAAGGAGATGAAACAGCGAAGATATTCCGGTAAGAGAATAGGG
JMFF022J02+ ACAGGGAGGGAAAGGTGGAAGGAGATGAAACAGCGAAGATATTCCGGTAAGAGAATAGGG
JMFN037B02+ ACAGGGAGGGAAAGGCTGAAGGAGATGAAACAGCGAAGATATTCCGGTAAGAGAATAGGG
JMSF016H10+ ACAGGGAGGGAAAGGTGGAAGGAGATGAAACAGCGAAGATATTCCGGTAAGAGAATAGGG
JMSF043M23+ ACAGGGAGGGAAAGGTGGAAGGAGATGAAACAGCGAAGATATTCCGGTAAGAGAATAGGG
JMFF003D07+ ACAGGGAGGGAAAGGTGGAAGGAGATGAAACAGCGAAGATATTCCGGTAAGAGAATAGGG
____________________________________________________________
consensus ACAGGGAGGGAAAGGTGGAAGGAGATGAAACAGCGAAGATATTCCGGTAAGAGAATAGGG
. : . : . : . : . : . :
JMFN010E01+ C
JMFF022J02+ CTCTGGAAACGGGTCGGGCGACGGATCTTATGGCTCCGAAACCCATTGCTTACTCTCTGA
JMFN037B02+ CTCTGGAAACGGGTCGGGCGACGGATCTTATGGCTCCGAAACCCATT
JMSF016H10+ CTCTGGAAACGGGTCGGGCGACGGATCTTATGGCTCCGAAACCCATTGCTTACTCTCTGA
JMSF043M23+ CTCTGGAAACGGGTCGGGCGACGGATCTTATGGCTCCGAAACCCATTGCTTACTCTCTGA
JMFF003D07+ CTCTGGAAACGGGTCGGGCGACGGATCTTATGGCTCCGAAACCCATTGCTTACTCTCTGA
____________________________________________________________
consensus CTCTGGAAACGGGTCGGGCGACGGATCTTATGGCTCCGAAACCCATTGCTTACTCTCTGA
. : . : . : . : . : . :
JMFF022J02+ TTTGGGGAGACGGGAGCGGGAC
JMSF016H10+ TTTGGGGAGACGGGAGCGGGAC
JMSF043M23+ TTTGGGGAGACGGGAGCGGGACGGAGATAAACAAGGTGGTAAACGAC
JMFF003D07+ TTTGGGGAGACGGGAGCGGGACGGAGATAAACAAGGTGGTAAACGACTAGACTAAACGTC
____________________________________________________________
consensus TTTGGGGAGACGGGAGCGGGACGGAGATAAACAAGGTGGTAAACGACTAGACTAAACGTC