Contig 003051:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002O15Sequence579003051 (4)ref|XP_004244492.1|84.7PREDICTED: uncharacterized protein LOC101266959 [Solanum lycopersicum]763013594 (3)
JMSF011P22Sequence252003051 (4)emb|CDP18011.1|4e-05unnamed protein product [Coffea canephora]717013594 (3)
JMSF017G20Sequence255003051 (4)emb|CDP18011.1|8e-15unnamed protein product [Coffea canephora]757024526ref|XP_007205225.1|2e-79hypothetical protein PRUPE_ppa005982mg [Prunus persica] gb|EMJ06424.1| hypotheti
JMSF019N04Sequence530003051 (4)ref|XP_006357057.1|1e-12PREDICTED: dentin sialophosphoprotein-like [Solanum tuberosum]785013594 (3)ref|XP_004244492.1|61.2PREDICTED: uncharacterized protein LOC101266959 [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF019N04+                                                                      A
JMFF002O15+                                CCCTTGAGTTTATTAAACTGATTAACCTATCACACTCTA
                      ____________________________________________________________
consensus                                  CCCTTGAGTTTATTAAACTGATTAACCTATCACACTCTA
 
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JMSF019N04+           TCCTAGAAAAAGTTTCCCGCATAATTAGCTGCTCAATTAAATGTTTGCTCTTACTCATTC
JMFF002O15+           TCCTAGAAAAAGTTTCCCGCATAATTAGCTGCTCAATTAAATGTTTGCTCTTACTCATTC
                      ____________________________________________________________
consensus             TCCTAGAAAAAGTTTCCCGCATAATTAGCTGCTCAATTAAATGTTTGCTCTTACTCATTC
 
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JMSF019N04+           CTTCATCCTGTTCATCATTTCTACCAGCATATTTTACCTCTTTTAATGATTCGGAGTGTT
JMFF002O15+           CTTCATCCTGTTCATCATTTCTACCAGCATATTTTACCTCTTTTAATGATTCGGAGTGTT
                      ____________________________________________________________
consensus             CTTCATCCTGTTCATCATTTCTACCAGCATATTTTACCTCTTTTAATGATTCGGAGTGTT
 
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JMSF019N04+           TATCATGATCATTGTCATCTTTGATATCATCTTCGTATAGGCAATCGCCGTCTGGAGGTC
JMFF002O15+           TATCATGATCATTGTCATCTTTGATATCATCTTCGTATAGGCAATCGCCGTCTGGAGGTC
                      ____________________________________________________________
consensus             TATCATGATCATTGTCATCTTTGATATCATCTTCGTATAGGCAATCGCCGTCTGGAGGTC
 
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JMSF017G20+                                              TCGGAGTTGAAGACGGAGGACAGCA
JMSF019N04+           CAGAAGACGACGAGGATGAAGAACAAGAAGAAGAGTCGGAGTTGAAGACGGAGGACAGCA
JMFF002O15+           CAGAAGACGACGAGGATGAAGAACAAGAAGAAGAGTCGGAGTTGAAGACGGAGGACAGCA
                      ____________________________________________________________
consensus             CAGAAGACGACGAGGATGAAGAACAAGAAGAAGAGTCGGAGTTGAAGACGGAGGACAGCA
 
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JMSF017G20+           GCTTGGCGGCCCCGGAGACAATAGTACGGGTGGCGGGAAAAACGAGTCCGGTGAGCCAAT
JMSF011P22+                                                AAAAACGAGTCCGGTGAGCCAAT
JMSF019N04+           GCTTGGCGGCCCCGGAGACAATAGTACGGGTGGCGGGAAAAACGAGTCCGGTGAGCCAAT
JMFF002O15+           GCTTGGCGGCCCCGGAGACAATAGTACGGGTGGCGGGAAAAACGAGTCCGGTGAGCCAAT
                      ____________________________________________________________
consensus             GCTTGGCGGCCCCGGAGACAATAGTACGGGTGGCGGGAAAAACGAGTCCGGTGAGCCAAT
 
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JMSF017G20+           TGGGGCTTTCGGGAGGGGGAGGAGGAGGCAGCGGCGGCGGGGGGCGGTCGTAGGGGGTTG
JMSF011P22+           TGGGGCTTTCGGGAGGGGGAGGAGGAGGCAGCGGCGGCGGGGGGCGGTCGTAGGGGGTTG
JMSF019N04+           TGGGGCTTTCGGGAGGGGGAGGAGGAGGCAGCGGCGGCGGGGGGCGGTCGTAGGGGGTTG
JMFF002O15+           TGGGGCTTTCGGGAGGGGGAGGAGGAGGCAGCGGCGGCGGGGGGCGGACGTAGGGGGTTG
                      ____________________________________________________________
consensus             TGGGGCTTTCGGGAGGGGGAGGAGGAGGCAGCGGCGGCGGGGGGCGGTCGTAGGGGGTTG
 
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JMSF017G20+           TGATTTTCCTACGCCTTTTATTGACTATTTTCCCGCCGGATCGAGCTCCGGCGTAAAAAT
JMSF011P22+           TGATTTTCCTACGCCTTTTATTGACTATTTTCCCGCCGGATCGAGCTCCGGCGTAAAAAT
JMSF019N04+           TGATTTTCCTACGCCTTTTATTGACTATTTTCCCGCCGGATCGAGCTCCGGCGTAAAAAT
JMFF002O15+           TGATTTTCCTACGCCTTTTATTGACTATTTTCCCGCCGGATCGAGCTCCGGCGTAAAAAT
                      ____________________________________________________________
consensus             TGATTTTCCTACGCCTTTTATTGACTATTTTCCCGCCGGATCGAGCTCCGGCGTAAAAAT
 
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JMSF017G20+           TCGTCGCCATATGACCGTCCAGTAGAGAAAGAGAGGGTTTTCAGGCTTC           
JMSF011P22+           TCGTCGCCATATGACCGTCCAGTAGAGAAAGAGAGGGTTTTCAGGCTTCAGGGCGCTCCA
JMSF019N04+           TCGTCGCCATATGACCGTCCAGTAGAGAAAGAGAGGGTTTTCAGGCTTCAGGGCGCTCCA
JMFF002O15+           TCGTCGCCATATGACCGTCCAGTAGAGAAAGAGAGGGTTTTCAGGCTTCAGGGCGCTCCA
                      ____________________________________________________________
consensus             TCGTCGCCATATGACCGTCCAGTAGAGAAAGAGAGGGTTTTCAGGCTTCAGGGCGCTCCA
 
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JMSF011P22+           TTGGGGACGGCGCGTCGGATATACAGTACGTATGCGGACGCGTGGCTT            
JMSF019N04+           TTGGGGACGGCGCGTCGGATATACAGTACGTATGCGGACGCGTGGCTT            
JMFF002O15+           TTGGGGACGGCGCGTCGGATATACAGTACGTATGCGGACGCGTGGCTTAACTAGAAATCC
                      ____________________________________________________________
consensus             TTGGGGACGGCGCGTCGGATATACAGTACGTATGCGGACGCGTGGCTTAACTAGAAATCC