Contig 003042:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN010K16+                                                            TTCACCGGAAG
                      ____________________________________________________________
consensus                                                              TTCACCGGAAG
 
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JMFN010K16+           AGACTCCATGTGTGGCCACCCAGCCCACTGAATCCCCCTCAAGTTAGGCCTGTAATATCC
                      ____________________________________________________________
consensus             AGACTCCATGTGTGGCCACCCAGCCCACTGAATCCCCCTCAAGTTAGGCCTGTAATATCC
 
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JMFN010K16+           CAGCTCACGCCTGATTGTGTCCAAAGCCTTCCCGGTTGGATGCGCATCGTTATACAAATA
JMFF001C10+                                            GGTTGGATGCGCATCGTTATACAAATA
                      ____________________________________________________________
consensus             CAGCTCACGCCTGATTGTGTCCAAAGCCTTCCCGGTTGGATGCGCATCGTTATACAAATA
 
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JMFN010K16+           AACCGGCACTTGGAATCGGTTTCCAAATTCCGCAGCCAATCGTTTAGCCAGCCAAGCAGC
JMFF001C10+           AACCGGCACTTGGAATCGGTTTCCAAATTCCGCAGCCAATCGTTTAGCCAGCCAAGCAGC
                      ____________________________________________________________
consensus             AACCGGCACTTGGAATCGGTTTCCAAATTCCGCAGCCAATCGTTTAGCCAGCCAAGCAGC
 
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JMFN010K16+           CTCGTCTAGCGACGCCCGGGCGAGAGGATGAACCGTAATGTCATCAACGACGCCGAGGCG
JMFF001C10+           CTCGTCTAGCGACGCCCGGGCGAGAGGATGAACCGTAATGTCATCAACTACGCCGAGGCG
                      ____________________________________________________________
consensus             CTCGTCTAGCGACGCCCGGGCGAGAGGATGAACCGTAATGTCATCAACTACGCCGAGGCG
 
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JMFN010K16+           GGGGTGAGCGCCGGAGTGGAGCTCAAGGTTTATGCCGTCGTAGGCAGCAGCGGCGATGGC
JMFF001C10+           GGGGTGAGCGCCGGAGTGGAGCTCAAGGTTTATGCCGTCGTAGGCAGCAGCGGCGATGGC
                      ____________________________________________________________
consensus             GGGGTGAGCGCCGGAGTGGAGCTCAAGGTTTATGCCGTCGTAGGCAGCAGCGGCGATGGC
 
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JMFN010K16+           CACCACGGTTTGCTGCAGCGGGCAGTAGATGGGGCTCCCGGTGGTGGCGTCGTGGATAAC
JMFF001C10+           CACCACGGTTTGCTGCAGCGGGCAGTAGATGGGGCTCCCGGTGGTGGCGTCGTGGATAAC
                      ____________________________________________________________
consensus             CACCACGGTTTGCTGCAGCGGGCAGTAGATGGGGCTCCCGGTGGTGGCGTCGTGGATAAC
 
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JMFN010K16+           ATAGGACACCAGAGTGTAGTTAATCCGGTTATACTCTCGGTCCTCGAATATGTTCACGAT
JMFF001C10+           ATAGGACACCAGAGTGTAGTTAATCCGGTTATACTCTCGGTCCTCGAATATGTTCACGAT
                      ____________________________________________________________
consensus             ATAGGACACCAGAGTGTAGTTAATCCGGTTATACTCTCGGTCCTCGAATATGTTCACGAT
 
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JMFN010K16+           GACCGTCTCCGGATCATGCTTGGCGGCGCGTTGAATGGACTCCAGAGCTTCCCGGTTTCG
JMFF001C10+           GACCGTCTCCGGATCATGCTTGGCGGCGCGTTGAATGGACTCCAGAGCTTCCCGGTTTCG
                      ____________________________________________________________
consensus             GACCGTCTCCGGATCATGCTTGGCGGCGCGTTGAATGGACTCCAGAGCTTCCCGGTTTCG
 
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JMFN010K16+           CGATTCGGAGATGTGGAGTTTGCAGCACAGCAGCACGGATTGCATCACCGATTTCTTCTC
JMFF001C10+           CGATTCGGAGATGTGGAGTTTGCAGCACAGCAGCACGGATTGCATCACCGATTTCTTCTC
                      ____________________________________________________________
consensus             CGATTCGGAGATGTGGAGTTTGCAGCACAGCAGCACGGATTGCATCACCGATTTCTTCTC
 
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JMFN010K16+           CTTGGAATTTGGGTTATTGGCAGCCATTTTTCCTCTTGCTGGTTTGATCTCAATTCTCAG
JMFF001C10+           CTTGGAATTTGGGTTATTGGCAGCCATTTTTCCTCTTGCTGGTTTGATCTCAATTCTCAG
                      ____________________________________________________________
consensus             CTTGGAATTTGGGTTATTGGCAGCCATTTTTCCTCTTGCTGGTTTGATCTCAATTCTCAG
 
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JMFN010K16+           CTCTTTC                                                     
JMFF001C10+           CTCTTTCTTTTCCTTTACTTCTTGGTTCAATAATGGAGAAGAGTCAGAGAGTGATCCATT
                      ____________________________________________________________
consensus             CTCTTTCTTTTCCTTTACTTCTTGGTTCAATAATGGAGAAGAGTCAGAGAGTGATCCATT