Contig 003032:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP001C09Sequence590003032 (11)
JMCP002H11Sequence541003032 (11)
JMCP003E01Sequence616003032 (11)
JMCP004D11Sequence617003032 (11)
JMCP006G11Sequence608003032 (11)
JMCP008G04Sequence546003032 (11)
JMCP009G10Sequence611003032 (11)
JMCP017C03Sequence612003032 (11)
JMCP018B06Sequence489003032 (11)
JMCP019A11Sequence422003032 (11)
JMCP019H02Sequence423003032 (11)

Alignment

This contig is upended


. : . : . : . : . : . :
JMCP004D11+ TGATTTACAGGGACATGT
JMCP009G10+ ACAGGGACATGT
rJMCP017C03+ ACAGAGACATGT
rJMCP003E01+ ACAGGGACATGT
rJMCP006G11+ GGACATGT
                      ____________________________________________________________
consensus TGATTTACAGGGACATGT
 
. : . : . : . : . : . :
JMCP004D11+ TATTTATGTGGCAGTCCAACATGTAATGATGTTAATTTACTAGGTCTTTGTCGTTTTTCA
JMCP009G10+ TATTTATGTGGCAGTCCAACATGTAATGATGTTAATTTACTAGGTCTTTGTCGTTTTTCA
rJMCP017C03+ TATTTATGTGGCAGTCCAACATGTAATGATGTTAATTTACTAGGTCaaacagGTTTTTCA
JMCP001C09+ GGCAGTCCAACATGTAATGATGTTAATTTACTAGGTCTTTGTCGTTTTTCA
JMCP008G04+ TTTTTCA
rJMCP002H11+ CA
rJMCP003E01+ TATTTATGTGGCAGTCCAACATGTAATGATGTTAATTTACTAGGTCTTTGTCGTTTTTCA
rJMCP006G11+ TATTTATGTGGCAGTCCAACATGTAATGATGTTAATTTACTAGGTCTTTGTCGTTTTTCA
                      ____________________________________________________________
consensus TATTTATGTGGCAGTCCAACATGTAATGATGTTAATTTACTAGGTCTTTGTCGTTTTTCA
 
. : . : . : . : . : . :
JMCP004D11+ TAATTGTTAAAATGTTATTTTCCACTCCTAAAGTTACCTCGAGGCATGCATGAATTA-TC
JMCP009G10+ TAATTGTTAAAATGTTATTTTCCACTCCTAAAGTTACCTCGAGGCATGCATGAATTA-TC
rJMCP017C03+ TAATTGTTAAAATGTTATTTTCCACTCCTAAAGTTACCTCGAGGCATGCATGAATTA-TC
JMCP001C09+ TAATTGTTAAAATGTTATTTTCCACTCCTAAAGTTACCTCGAGGCATGCATGAATTA-TC
JMCP008G04+ TAATTGTTAAAATcTataTTTggtgaggattAGTatggaCGtccgtacgtaGAtaat-ag
rJMCP002H11+ TAATTGTTAAAATGTTATTTTggACTCCTAAAGTTACCTCGAGGCATGCATGAATTA-TC
rJMCP018B06+ AGGCtTGCATcttaat-ag
rJMCP003E01+ TAATTGTTAAAATGTTATTTTCCACTCCTAAAGTTACCTCGAGGCATGCATGAATTA-TC
rJMCP006G11+ TAATTGTTAAAATGTTATTTTCCAgaggTAAAGTTAggagctccgAacgtacttaataaa
                      ____________________________________________________________
consensus TAATTGTTAAAATGTTATTTTCCACTCCTAAAGTTACCTCGAGGCATGCATGAATTA-TC
 
. : . : . : . : . : . :
JMCP004D11+ TCTCTCTATTATCTTAAGATAAGAAAAGGAAAACATTTTATTCTTCATTTACACTCACCC
JMCP009G10+ TCTCTCTATTATCTTAAGATAAGAAAAGGAAAACATTTTATTCTTCATTTACACTCACCC
rJMCP017C03+ TCTCTCTATTATCTTAAGATAAGAAAAGGAAAACATTTTATTCTTCATTTACACTCACCC
JMCP001C09+ TCTCTCTATTATCTTAAGATAAGAAAAGGAAAACATTTTATagaTCATTTACACTCACCC
JMCP008G04+ aCagagataTATCTTttGATAAGAAAAGGAAttgATTTTATagaTCATTTACACTCACCC
rJMCP002H11+ TCTCTCTATTtaCTTAAGATAAGAAAAGGAAAACATTTTATTCTTCATTTACACTCACCC
rJMCP018B06+ agagagataatagaattGATAAGAAAtccAAttCAaaaataagaagtaaatgtgTCACCC
rJMCP003E01+ TCTCTCTATTATCTTAAGATAAGAAAAGGAAAACATTTTATTCTTCATTTACACTCACCC
rJMCP019H02+ CCC
rJMCP006G11+ aaaaaaataaaagaattctaAAGAAAAGGAAAACtTTTataagaaCATTTACACTCACCC
JMCP019A11+ CC
                      ____________________________________________________________
consensus TCTCTCTATTATCTTAAGATAAGAAAAGGAAAACATTTTATTCTTCATTTACACTCACCC
 
. : . : . : . : . : . :
JMCP004D11+ ATTCACTGTCAAGCAGCGAAGCTAATATTTGGAACGGAGGAGGTAATTTTAGGGACTCTT
JMCP009G10+ ATTCACTGTCAAGCAGCGAAGCTAATATTTGGAACGGAGGAGGTAATTTTAGGGACTCTT
rJMCP017C03+ ATTCACTGTCAAGCAGCGAAGCTAATATTTGGAACGGAGGAGGTAATTTTAGGGACTCTT
JMCP001C09+ ATTCACTGTCAAGCAGCGAAGCTAATATTTGGAACGGAGGAGGTAATTTTAGGGACTCTT
JMCP008G04+ ATTCACTGTCAAGCAGCGAAGCTAATATTTGGAACGGAGGAGGTAATTTTAGGGACTCTT
rJMCP002H11+ ATTCACTGTCAAGCAGCGAAGCTAATATTTGGAACGGAGGAGGTAATTTTAGGGACTCTT
rJMCP018B06+ ATTCACTGTCAAGCAcgcAAGCTAATATTTGGAACGGAGGAGGTAATTTTAGGGACTCTT
rJMCP003E01+ ATTCACTGTCAAGCAGCGAAGCTAATATTTGGAACGGAGGAGGTAATTTTAGGGACTCTT
rJMCP019H02+ ATTCACTGTCAAGCAGCGAAGCTAATATTTGGAACGGAGGAGGTAATTTTAGGGACTCTT
rJMCP006G11+ ATTCACTGTCAAGCAGCGAAGCTAATATTTGGAACGGAGGAGGTAATTTTAGGGACTCTT
JMCP019A11+ ATTCACTGTCAAGCAGCGAAGCTAATATaacGAACGGAGGAGGTAATTTTAGGGACTCTT
                      ____________________________________________________________
consensus ATTCACTGTCAAGCAGCGAAGCTAATATTTGGAACGGAGGAGGTAATTTTAGGGACTCTT
 
. : . : . : . : . : . :
JMCP004D11+ TTAATGATACAAATTAAATTTAAGTTTTGAAGTTTTAATGCATCTATCTGATAGTACTAC
JMCP009G10+ TTAATGATACAAATTAAATTTAAGTTTTGAAGTTTTAATGCATCTATCTGATAGTACTAC
rJMCP017C03+ TTAATGATACAAATTAAATTTAAGTTTTGAAGTTTTAATGCATCTATCTGATAGTACTAC
JMCP001C09+ TTAATGATACAAATTAAATTTAAGTTTTGAAGTTTTAATGCATCTATCTGATAGTACTAC
JMCP008G04+ TTAATGATACAAATTAAATTTAAGTTTTGAAGTTTTAATGCATCTATCTGATAGTACTAC
rJMCP002H11+ TTAATGATACAAATTAAATTTAAGTTTTGAAGTTTTAATGCATCTATCTGATAGTACTAC
rJMCP018B06+ TTAATGATACAAATTAAATTTAAGTaaacAAGTTTTAATGCATCTATCTGATAGTACTAC
rJMCP003E01+ TTAATGATACAAATTAAATTTAAGTTTTGAAGTTTTAATGCATCTATCTGATAGTACTAC
rJMCP019H02+ TTAATGATACAAATTAAATTTAAGTTTTGAAGTTTTAATGCATCTATCTGATAGTACTAC
rJMCP006G11+ TTAATGATACAAATTAAATTTAAGTTTTGAAGTTTTAATGCATCTATCTGATAGTACTAC
JMCP019A11+ TTAATGATACAAATTAAATTTAAGTTTTGAAGTTTTAATGCATCTATCTGATAGTACTAC
                      ____________________________________________________________
consensus TTAATGATACAAATTAAATTTAAGTTTTGAAGTTTTAATGCATCTATCTGATAGTACTAC
 
. : . : . : . : . : . :
JMCP004D11+ TGGTTAGATGTTCAGATCATCTTAACATGATTATTTAGATGAGATAGATCATATATAGAA
JMCP009G10+ TGGTTAGATGTTCAGATCATCTTAACATGATTATTTAGATGAGATAGATCATATATAGAA
rJMCP017C03+ TGGCTAGATGTTCAGATCATCTTAACATGATTATTTAGATGAGATAGATCATATATAGAA
JMCP001C09+ TGGTTAGATGTTCAGATCATCTTAACATGATTATTTAGATGAGATAGATCATATATAGAA
JMCP008G04+ TGGTTAGATGTTCAGATCATCTTAACATGATTATTTAGATGAGATAGATCATATATAGAA
rJMCP002H11+ TGGTTAGATGTTCAGATCATCTTAACATGATTATTTAGATGAGATAGATCATATATAGAA
rJMCP018B06+ TGGTTAGATGTTCAGATCATCTTAACATGATTATTTAGATGAGATAGATCATATATAGAA
rJMCP003E01+ TGGTTAGATGTTCAGATCATCTTAACATGATTATTTAGATGAGATAGATCATATATAGAA
rJMCP019H02+ TGGTTAGATGTTCAGATCATCTTAACATGATTATTTAGATGAGATAGATCATATATAGAA
rJMCP006G11+ TGGTTAGATGTTCAGATCATCTTAACATGATTATTTAGATGAGATAGATCATATATAGAA
JMCP019A11+ TGGTTAGATGTTCAGATCATCTTAACATGATTATTTAGATGAGATAGATCATATATAGAA
                      ____________________________________________________________
consensus TGGTTAGATGTTCAGATCATCTTAACATGATTATTTAGATGAGATAGATCATATATAGAA
 
. : . : . : . : . : . :
JMCP004D11+ GTTGATCAATTCACACAATGCTAATGTTCATGATATCAACAAATTAAACATTATTGCTCC
JMCP009G10+ GTTGATCAATTCACACAATGCTAATGTTCATGATATCAACAAATTAAACATTATTGCTCC
rJMCP017C03+ GTTGATCAATTCACACAATGCTAATGTTCATGATATCAACAAATTAAACATTATTGCTCC
JMCP001C09+ GTTGATCAATTCACACAATGCTAATGTTCATGATATCAACAAATTAAACATTATTGCTCC
JMCP008G04+ GTTGATCAATTCACACAATGCTAATGTTCATGATATCAACAAATTAAACATTATTGCTCC
rJMCP002H11+ GTTGATCAATTCACACAATGCTAATGTTCATGATATCAACAAATTAAACATTATTGCTCC
rJMCP018B06+ GTTGATCAATTCACACAATcgaAATGTTCATGATATCAACAAATTAAACATTATTGCTCC
rJMCP003E01+ GTTGATCAATTCACACAATGCTAATGTTCATGATATCAACAAATTAAACATTATTGCTCC
rJMCP019H02+ GTTGATCAATTCACACAATGCTAATGTTCATGATATCAACAAATTAAACATTATTGCTCC
rJMCP006G11+ GTTGATCAATTCACACAATGCTAATGTTCATGATATCAACAAATTAAACATTATTGCTCC
JMCP019A11+ GTTGATCAATTCACACAATGCTAATGTTCATGATATCAACAAATTAAACATTATTGCTCC
                      ____________________________________________________________
consensus GTTGATCAATTCACACAATGCTAATGTTCATGATATCAACAAATTAAACATTATTGCTCC
 
. : . : . : . : . : . :
JMCP004D11+ GCTTGAGTCTTGACTTAATTGGCCTATGATAATTATGACCAATTTTAACAATCAGAAGGT
JMCP009G10+ GCaaGAGTCTTGACTTAATTGGCCTAaGATAATTATGACCAATTTTAACAATCAGAAGGT
rJMCP017C03+ GCTTGAGTCTTGACTTAATTGGCCTATGATAATTATGACCAATTTTAACAATCAGAAGGT
JMCP001C09+ GCTTGAGTCTTGACTTAATTGGCCTATGATAATTATGACCAATTTTAACAATCAGAAGGT
JMCP008G04+ GCTTGAGTCTTGACTTAATTGGCCTATGATAATTATGACCAATTTTAACAATCAGAAGGT
rJMCP002H11+ GCTTGAGTCTTGACTTAATTGGCCTATGATAATTATGACCAATTTTAACAATCAGAAGGT
rJMCP018B06+ GCTTGAGTCTTGACTTAATTGGCCTATGATAATTATGACCAATTTTAACAATCAGAAGGT
rJMCP003E01+ GCTTGAGTCTTGACTTAATTGGCCTATGATAATTATGACCAATTTTAACAATCAGAAGGT
rJMCP019H02+ GCTTGAGTCTTGACTTAATTGGCCTATGATAATTATGACCAATTTTAACAATCAGAAGGT
rJMCP006G11+ GCTTGAGTCTTGACTTAATTGGCCTATGATAATTATGACCAATTTTAACAATCAGAAGGT
JMCP019A11+ GCTTGAGTCTTGACTTAATTGGCCTATGATAATTATGACCAATTTTAACAATCAGAAGGT
                      ____________________________________________________________
consensus GCTTGAGTCTTGACTTAATTGGCCTATGATAATTATGACCAATTTTAACAATCAGAAGGT
 
. : . : . : . : . : . :
JMCP004D11+ ACAACTGTACTGTTCTACCAAAAAGATTGTTTCTTTCAAATTAAAATGGAATGGTGGCCT
JMCP009G10+ ACAACTGTACTGTTCTACCAAAAAGATTGTTTCTTTCAAATTAAAATGGAATGGTGGCCT
rJMCP017C03+ ACAACTGTACTGTTCTACCAAAAAGATTGTTTCTTTCAAATTAAAATGGAATGGTGGCCT
JMCP001C09+ ACAACTGTACTGTTCTACCAAAAAGATTGTTTCTTTCAAATTAAAATGGAATGGTGGCCT
JMCP008G04+ ACAACTGTACTGTTCTACCAAAAAGATTGTTTCTTTCAAATTAAAATGGAATGGTGGCCT
rJMCP002H11+ ACAACTGTACTGTTCTACCAAAAAGATTGTTTCTTTCAAATTAAAATGGAATGGTGGCCT
rJMCP018B06+ ACAACTGTACTGTTCTACCAAAAAGATTGTTTCTTTCAAATTAAAATGGAATGGTGGCCT
rJMCP003E01+ ACAACTGTACTGTTCTACCAAAAAGATTGTTTCTTTCAAATTAAAATGGAATGGTGGCCT
rJMCP019H02+ ACAACTGTACTGTTCTACCAAAAAGATTGTTTCTTTCAAATTAAAATGGAATGGTGGCCT
rJMCP006G11+ ACAACTGTACTGTTCTACCAAAAAGATTGTTTCTTTCAAATTAAAATGGAATGGTGGCCT
JMCP019A11+ ACAACTGTACTGTTCTACCAAAAAGATTGTTTCTTTCAAATTAAAATGGAATGGTGGCCT
                      ____________________________________________________________
consensus ACAACTGTACTGTTCTACCAAAAAGATTGTTTCTTTCAAATTAAAATGGAATGGTGGCCT
 
. : . : . : . : . : . :
JMCP004D11+ TGGCTACTCCATGATCCATCTACTACCATGTTTTTTATCAGATATGATGTTTCTAGACCT
JMCP009G10+ TGGCTACTCCATGATCCATCTACTACCATGTTTTTTATTAGATATGATGTTTCTAGACCT
rJMCP017C03+ TGGCTACTCCATGATCCATCTACTACCATGTTTTTTATTAGATATGATGTTTCTAGACCT
JMCP001C09+ TGGCTACTCCATGATCCATCTACTACCATGTTTTTTATTAGATATGATGTTTCTAGACCT
JMCP008G04+ TGGCTACTCCATGATCCATCTACTACCATGTTTTTTATTAGATATGATGTTTCTAGACCT
rJMCP002H11+ TGGCTACTCCATGATCCATCTACTACCATGTTTTTTATTAGATATGATGTTTCTAGACCT
rJMCP018B06+ TGGCTACTCCATGATCCATCTACTACCATGTTTTTTATatGATATGATGTT
rJMCP003E01+ TGGCTACTCCATGATCCATCTACTACCATGTTTTTTATTAGATATGATGTTTCTAGACCT
rJMCP019H02+ TGGCTACTCCATGATCCATCTACTACCATGTTTTTTATTAGATATGATGTTTCTAGACCT
rJMCP006G11+ TGGCTACTCCATGATCCATCTACTACCATGTTTTTTATTAGATATGATGTTTCTAGACCT
JMCP019A11+ TGGCTACTCCATGATCCATCTACTACCATGTTTTTTATTAGATATGATGTTTCTAGACCT
                      ____________________________________________________________
consensus TGGCTACTCCATGATCCATCTACTACCATGTTTTTTATTAGATATGATGTTTCTAGACCT