Contig 003031:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP001D08Sequence550003031 (13)
JMCP003D09Sequence622003031 (13)
JMCP017G11Sequence606003031 (13)
JMCP017H01Sequence608003031 (13)
JMFN008C15Sequence614003031 (13)
JMFN013J23Sequence618003031 (13)
JMFN015D08Sequence614003031 (13)
JMFN030A13Sequence618003031 (13)
JMFN030B23Sequence404003031 (13)
JMFN031G16Sequence610003031 (13)
JMFS004D09Sequence552003031 (13)
JMFS010D04Sequence624003031 (13)
JMFS138H12Sequence236003031 (13)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN015D08+ CGGGGGCTTCGCTAGGAGGCGCAGGTGGGCCTTGAAGCTC
JMFS010D04+ TTAGGTCCGGGGGCTTCGCTAGGAGGCGCAGGTGGGCCTTGAAGCTC
JMFN030A13+ CGGGGGCTTCGCTAGGAGGCGCAGGTGGGCC-TGAAGCTC
JMFN031G16+ CTTGAAGCTC
JMFN008C15+ GGCGCAGGTGGGCCTTGAAGCTC
JMFN013J23+ GAGGCGCAGGTGGGCCTTGAAGCTC
rJMCP003D09+ GGCGCAGGTGGGCCTTGAAGCTC
rJMCP017H01+ TTGAAGCTC
JMCP017G11+ GAAGCTC
                      ____________________________________________________________
consensus TTAGGTCCGGGGGCTTCGCTAGGAGGCGCAGGTGGGCCTTGAAGCTC
 
. : . : . : . : . : . :
JMFN015D08+ GGGAGAAGGAGCCGGTGAAGATGCGGTGTGCTTCTTACTCTTCTTCTTGCCTTTGCCCTT
JMFS010D04+ GGGAGAAGGAGCCGGTGAAGATGCGGTGTGCTTCTTACTCTTCTTCTTGCCTTTGCCCTT
JMFN030A13+ GGGAGAAGGAGCCGGTGAAGATGCGGTGTGCTTCTTACTCTTCTTCTTGCCTTTGCCCTT
JMFN031G16+ GGGAGAAGGAGCCGGTGAAGATGCGGTGTGCTTCTTACTCTTCTTCTTGCCTTTGCCCTT
JMFN008C15+ GGGAGAAGGAGCCGGTGAAGATGCGGTGTGCTTCTTACTCTTCTTCTTGCCTTTGCCCTT
JMFN013J23+ GGGAGAAGGAGCCGGTGAAGATGCGGTGTGCTTCTTACTCTTCTTCTTGCCTTTGCCCTT
rJMCP003D09+ GGGAGAAGGAGCCGGTGAAGATGCGGTGTGCTTCTTACTCTTCTTCTTGCCTTTGCCCTT
rJMCP001D08+ CCTTTGCCCTT
JMFS004D09+ GCCCTT
rJMCP017H01+ GGGAGAAGGAGCCGGTGAAGATGCGGTGTGCTTCTTACTCTTCTTCTTGCCTTTGCCCTT
JMCP017G11+ GGGAGAAGGAGCCGGTGAAGATGCGGTGTGCTTCTTACTCTTCTTCTTGCCTTTGCCCTT
                      ____________________________________________________________
consensus GGGAGAAGGAGCCGGTGAAGATGCGGTGTGCTTCTTACTCTTCTTCTTGCCTTTGCCCTT
 
. : . : . : . : . : . :
JMFN015D08+ GCTCTTGCTCGGAGCCGGAGCAGGAGTCTCTGATGATGTAGGCGGGGCGACGGGGGCCGC
JMFS010D04+ GCTCTTGCTCGGAGCCGGAGCAGGAGTCTCTGATGATGTAGGCGGGGCGACGGGGGCCGC
JMFN030A13+ GCTCTTGCTCGGAGCCGGAGCAGGAGTCTCTGATGATGTAGGCGGGGCGACGGGGGCCGC
JMFN031G16+ GCTCTTGCTCGGAGCCGGAGCAGGAGTCTCTGATGATGTAGGCGGGGCGACGGGGGCCGC
JMFN008C15+ GCTCTTGCTCGGAGCCGGAGCAGGAGTCTCTGATGATGTAGGCGGGGCGACGGGGGCCGC
JMFN013J23+ GCTCTTGCTCGGAGCCGGAGCAGGAGTCTCTGATGATGTAGGCGGGGCGACGGGGGCCGC
rJMCP003D09+ GCTCTTGCTCGGAGCCGGAGCAGGAGTCTCTGATGATGTAGGCGGGGCGACGGGGGCCGC
rJMCP001D08+ GCTCTTGCTCGGAGCCGGAGCAGGAGTCTCTGATGATGTAGGCGGGGCGACGGGGGCCGC
JMFS004D09+ GCTCTTGCTCGGAGCCGGAGCAGGAGTCTCTGATGATGTAGGCGGGGCGACGGGGGCCGC
rJMCP017H01+ GCTCTTGCTCGGAGCCGGAGCAGGAGTCTCTGATGATGTAGGCGGGGCGACGGGGGCCGC
JMCP017G11+ GCTCTTGCTCGGAGCCGGAGCAGGAGTCTCTGATGATGTAGGCGGGGCGACGGGGGCCGC
                      ____________________________________________________________
consensus GCTCTTGCTCGGAGCCGGAGCAGGAGTCTCTGATGATGTAGGCGGGGCGACGGGGGCCGC
 
. : . : . : . : . : . :
JMFN015D08+ GGCGGGAGGGGAAGAGGCAGCAGGTGGAGTGGCGGCCTCCGGCGCGGGAGACGGTGGAGA
JMFS010D04+ GGCGGGAGGGGAAGAGGCAGCAGGTGGAGTGGCGGCCTCCGGCGCGGGAGACGGTGGAGA
JMFN030A13+ GGCGGGAGGGGAAGAGGCAGCAGGTGGAGTGGCGGCCTCCGGCGCGGGAGACGGTGGAGA
JMFN030B23+ GCAGCAGGTGGAGTGGGGGCTTCCGGCGCGGGAGACGGTGGAGA
JMFN031G16+ GGCGGGAGGGGAAGAGGCAGCAGGTGGAGTGGCGGCCTCCGGCGCGGGAGACGGTGGAGA
JMFN008C15+ GGCGGGAGGGGAAGAGGCAGCAGGTGGAGTGGCGGCCTCCGGCGCGGGAGACGGTGGAGA
JMFN013J23+ GGCGGGAGGGGAAGAGGCAGCAGGTGGAGTGGCGGCCTCCGGCGCGGGAGACGGTGGAGA
rJMCP003D09+ GGCGGGAGGGGAAGAGGCAGCAGGTGGAGTGGCGGCCTCCGGCGCGGGAGACGGTGGAGA
rJMCP001D08+ GGCGGGAGGGGAAGAGGCAGCAGGTGGAGTGGCGGCCTCCGGCGCGGGAGACGGTGGAGA
JMFS004D09+ GGCGGGAGGGNAAGAGGCAGCAGGTGGAGTGGCGGCCTCCGGCGCGGGAGACGGTGGAGA
rJMCP017H01+ GGCGGGAGGGGAAGAGGCAGCAGGTGGAGTGGCGGCCTCCGGCGCGGGAGACGGTGGAGA
JMCP017G11+ GGCGGGAGGGGAAGAGGCAGCAGGTGGAGTGGCGGCCTCCGGCGCGGGAGACGGTGGAGA
                      ____________________________________________________________
consensus GGCGGGAGGGGAAGAGGCAGCAGGTGGAGTGGCGGCCTCCGGCGCGGGAGACGGTGGAGA
 
. : . : . : . : . : . :
JMFN015D08+ TTGGACAGGCGCGGCTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
JMFS010D04+ TTGGACAGGCGCGGCTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
JMFN030A13+ TTGGACAGGCGCGGCTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
JMFN030B23+ TTGGTCAGGCGCGGGTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
JMFN031G16+ TTGGACAGGCGCGGCTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
JMFN008C15+ TTGGACAGGCGCGGCTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
JMFN013J23+ TTGGACAGGCGCGGCTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
rJMCP003D09+ TTGGACAGGCGCGGCTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
rJMCP001D08+ TTGGACAGGCGCGGCTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
JMFS004D09+ TTGGACAGGCGCGGCTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
rJMCP017H01+ TTGGACAGGCGCGGCTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
JMCP017G11+ TTGGACAGGCGCGGCTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
                      ____________________________________________________________
consensus TTGGACAGGCGCGGCTGCGGGTGGGGACTTCACGGGAGCGGCGGCCGGTGGAGAGCTCAC
 
. : . : . : . : . : . :
JMFN015D08+ TGGCACGGGAGCCGGGGGTGCAGATTCCGGCGTCTTAGCTGGCGGCGCGGCAGCTGGAGC
JMFS010D04+ TGGCACGGGAGCCGGGGGTGCAGATTCCGGCGTCTTAGCTGGCGGCGCGGCAGCTGGAGC
JMFN030A13+ TGGCACGGGAGCCGGGGGTGCAGATTCCGGCGTCTTAGCTGGCGGCGCGGCAGCTGGAGC
JMFN030B23+ TGTCACGGGAGCCGGGGGTGCAGATTCCGGCGTCTTAGCTGGCGGCGCGGCAGCTGGAGC
JMFS138H12+ CTTAGCTGGCGGCGCGGCAGCTGGAGC
JMFN031G16+ TGGCACGGGAGCCGGGGGTGCAGATTCCGGCGTCTTAGCTGGCGGCGCGGCAGCTGGAGC
JMFN008C15+ TGGCACGGGAGCCGGGGGTGCAGATTCCGGCGTCTTAGCTGGCGGCGCGGCAGCTGGAGC
JMFN013J23+ TGGCACGGGAGCCGGGGGTGCAGATTCCGGCGTCTTAGCTGGCGGCGCGGCAGCTGGAGC
rJMCP003D09+ TGGCGCGGGAGCCGGGGGTGCAGATTCCGGCGTCTTAGCTGGCGGCGCGGCAGgacGAGC
rJMCP001D08+ TGGCACGGGAGCCGGGGGTGCAGATTCCGGCGTCTTAGCTGGCGGCGCGGCAGgacGAGC
JMFS004D09+ TGGCACGGGAGCCGGGGGTGCAGATTCCGGCGTCTTAGCTGGCGGCGCGGCAGCTGGAGC
rJMCP017H01+ TGGCACGGGAGCCGGGGGTGCAGATTCCGGCGTCTTAGCTGGCGGCGCGGCAGCTGGAGC
JMCP017G11+ TGGCACGGGAGCCGGGGGTGCAGAGTCCGGCGTCTTAGCTGGCGGCGCGGCAGCTGGAGC
                      ____________________________________________________________
consensus TGGCACGGGAGCCGGGGGTGCAGATTCCGGCGTCTTAGCTGGCGGCGCGGCAGCTGGAGC
 
. : . : . : . : . : . :
JMFN015D08+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
JMFS010D04+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
JMFN030A13+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
JMFN030B23+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
JMFS138H12+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
JMFN031G16+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
JMFN008C15+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
JMFN013J23+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
rJMCP003D09+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
rJMCP001D08+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
JMFS004D09+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
rJMCP017H01+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
JMCP017G11+ CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
                      ____________________________________________________________
consensus CGTGACTGCGGCTGAGGGTGGAGTAGAGGCCGGAGCCTGCGCCGGAGGAGCCGAAGCGGG
 
. : . : . : . : . : . :
JMFN015D08+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
JMFS010D04+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
JMFN030A13+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
JMFN030B23+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCATCCGGAGAAGT
JMFS138H12+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
JMFN031G16+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
JMFN008C15+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
JMFN013J23+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
rJMCP003D09+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
rJMCP001D08+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
JMFS004D09+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
rJMCP017H01+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
JMCP017G11+ AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
                      ____________________________________________________________
consensus AGCGGGAGTTTTAGGCTTTGAAGGAGCGGCAGCTGTGGAAGGCGAAGCAGCCGGAGAAGT
 
. : . : . : . : . : . :
JMFN015D08+ GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
JMFS010D04+ GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
JMFN030A13+ GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
JMFN030B23+ GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
JMFS138H12+ GGCGGCGTGCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
JMFN031G16+ GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
JMFN008C15+ GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
JMFN013J23+ GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
rJMCP003D09+ GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
rJMCP001D08+ GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
JMFS004D09+ GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
rJMCP017H01+ GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
JMCP017G11+ GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGACCGGAGACTGACCTC
                      ____________________________________________________________
consensus GGCGGCG-GCCTTAGACGCAGCCGGAGCTTTGGCAGGCGAAGCGGCCGGAGACTGACCTC
 
. : . : . : . : . : . :
JMFN015D08+ CGACGCCGGCCACTACAATGCACATAAGCACCACCGCAAACCCAACCTTCCGATCCATCG
JMFS010D04+ CGACGCCGGCCACTACAATGCACATAAGCACCACCGCAAACCCAACCTTCCGATCCATCG
JMFN030A13+ CGACGCCGGCCACTACAATGCACATAAGCACCACCGCAAACCCAACCTTCCGATCCATCG
JMFN030B23+ CGTCGCCGGCCGCTACAATGCGCATGAGCACCTCCGCAAACCCAACC
JMFS138H12+ CGACGCCGGCCACTACAATGCACATAAGC
JMFN031G16+ CGACGCCGGCCACTACAATGCACATAAGCACCACCGCAAACCCAACCTTCCGATCCATCG
JMFN008C15+ CGACGCCGGCCACTACAATGCACATAAGCACCACCGCAAACCCAACCTTCCGATCCATCG
JMFN013J23+ CGACGCCGGCCACTACAATGCACATAAGCACCACCGCAAACCCAACCTTCCGATTCATTG
rJMCP003D09+ CGACGCCGGCCACTACAATGCACATAAGCACCACCGCAAACCCAACCTTCCGATCCATCG
rJMCP001D08+ CGACGCCGGCCACTACAATGCACATAAGCACCACCGCAAACCCAACCTTCCGATCCATCG
JMFS004D09+ CGACGCCGGCCACTACAATGCACATAAGCACCACCGCAAACCCAACCTTCCGATCCATCG
rJMCP017H01+ CGACGCCGGCCACTACAATGCACATAAGCACCACCGCAAACCCAACCTTCCGATCCATCG
JMCP017G11+ CGACGCCGGCCACTACAATGCACATAAGCACCACCGCAAACCCAACCTTCCGATCCATCG
                      ____________________________________________________________
consensus CGACGCCGGCCACTACAATGCACATAAGCACCACCGCAAACCCAACCTTCCGATCCATCG
 
. : . : . : . : . : . :
JMFN015D08+ CTTCAACACAGAAAAACAAAACAGAAAAC
JMFS010D04+ CTTCAACACAGAAAAACAAAACAGAAAACTTCTATTGC
JMFN030A13+ CTTCAACACAGAAAAACAAAACAGAAAACTTCTATTGC
JMFN031G16+ CTTCAACACAGAAAAACAAAACAGAAAACTTCTATTGCAAAAAACAACAG
JMFN008C15+ CTTCAACACAGAAAAACAAAACAGAAAACTTCTATTGCAAAAAACAACAGAA
JMFN013J23+ CTTCAACACAGAAAAACAAAACAGAAAACTTCTATTGCAAAAAACAACAGAAGA
rJMCP003D09+ CTTCAACACAGAAAAACAAAACAGAAAACTTCTATTGCAAAAAACAACAGAAGAGAATGG
rJMCP001D08+ CTTCAACACAGAAAAACAAAACAGAAAACTTCTATTGCAAAAAACAACAGAAGAGAATGG
JMFS004D09+ CTTCAACACAGAAAAACAAAACAGAAAACTTCTATTGCAAAAAACAACAGAAGAGAA
rJMCP017H01+ CTTCAACACAGAAAAACAAAACAGAAAACTTCTATTGCAAAAAACAACAGAAGAGAATGG
JMCP017G11+ CTTCAACACAGAAAAACAAAACAGAAAACTTCTATTGCAAAAAACAACAGAAGAGAATGG
                      ____________________________________________________________
consensus CTTCAACACAGAAAAACAAAACAGAAAACTTCTATTGCAAAAAACAACAGAAGAGAATGG