Contig 003023:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP002B07Sequence540003023 (2)
JMCP002H10Sequence588003023 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMCP002H10+ TAAAAATTTTATGTTTTTAGGTATAAAATTTTATACATTTGAAACATA
                      ____________________________________________________________
consensus TAAAAATTTTATGTTTTTAGGTATAAAATTTTATACATTTGAAACATA
 
. : . : . : . : . : . :
rJMCP002B07+ ATTTTTTTTAAtctgaattgtagtagcTTTTcccCTAGGACGCAGTcgtgggacGacgtg
JMCP002H10+ ATTTTTTTTAAAGACTTAACAagtagcTTTTGGcgaAGGACGCAGTGCACCCTGGTGgtg
                      ____________________________________________________________
consensus ATTTTTTTTAAAGACTTAACATCATCGTTTTGGGCTAGGACGCAGTGCACCCTGGTGCAC
 
. : . : . : . : . : . :
rJMCP002B07+ GATATAATTTGCCCCTGGCGAACAAAGTTGAGGAAAAAAAAAAGGCTACTTGGGCCTGAG
JMCP002H10+ GATATAATTTGCCCCTGGCGAACAAAGTTGAGGAAAAAAAAAAGGCTACTTGGGCCTGAG
                      ____________________________________________________________
consensus GATATAATTTGCCCCTGGCGAACAAAGTTGAGGAAAAAAAAAAGGCTACTTGGGCCTGAG
 
. : . : . : . : . : . :
rJMCP002B07+ TGTGACGAGCCAAGTCCGCAACAATGCCCAATAGGCAGTGTTAAGACCCAAAACAATGAC
JMCP002H10+ TGTGACGAGCCAAGTCCGCAACAATGCCCAATAGGCAGTGTTAAGACCCAAAACAATGAC
                      ____________________________________________________________
consensus TGTGACGAGCCAAGTCCGCAACAATGCCCAATAGGCAGTGTTAAGACCCAAAACAATGAC
 
. : . : . : . : . : . :
rJMCP002B07+ GTTGGTCCAAAGTAAAGGTTCATCTCAAATCACCAAAGTTTGAAGCTTGACAGCACGTGC
JMCP002H10+ GTTGGTCCAAAGTAAAGGTTCATCTCAAATCACCAAAGTTTGAAGCTTGACAGCACGTGC
                      ____________________________________________________________
consensus GTTGGTCCAAAGTAAAGGTTCATCTCAAATCACCAAAGTTTGAAGCTTGACAGCACGTGC
 
. : . : . : . : . : . :
rJMCP002B07+ GAGAAGACAAGTCCTACAGGCTACAGCGCTACAAAGCTTTTCCAGCATATATACACAACT
JMCP002H10+ GAGAAGACAAGTCCTACAGGCTACAGCGCTACAAAGCTTTTCCAGCATATATACACAACT
                      ____________________________________________________________
consensus GAGAAGACAAGTCCTACAGGCTACAGCGCTACAAAGCTTTTCCAGCATATATACACAACT
 
. : . : . : . : . : . :
rJMCP002B07+ GCATGTACAAATATTCCCCGGCCCCCAAAAAATAAAAACTCATCTTCGATCTTTGTATTG
JMCP002H10+ GCATGTACAAATATTCCCCGGCCCCCAAAAAATAAAAACTCAagaagcATCTCTGTATTG
                      ____________________________________________________________
consensus GCATGTACAAATATTCCCCGGCCCCCAAAAAATAAAAACTCATCTTCGATCTTTGTATTG
 
. : . : . : . : . : . :
rJMCP002B07+ GgCTGCTATGTCGTCTTCTCTAACTTTTATGGCTTTATATAGTAAATTATTATAATGTGT
JMCP002H10+ GCCTGCTATGTCGTCTTCaCTAACTTTTATGGCTTTATATAGTAAATTATTATAATGTGT
                      ____________________________________________________________
consensus GCCTGCTATGTCGTCTTCTCTAACTTTTATGGCTTTATATAGTAAATTATTATAATGTGT
 
. : . : . : . : . : . :
rJMCP002B07+ ATATCTTTCACAGTTTCACACTTTCACCTCTGGATCTGAAATAAAAAAACGTGCAAACTG
JMCP002H10+ ATATCTTTCACAGTTTCACACTTTCACCTCTGGATCTGAAATAAAAAAACGTGCAAACTG
                      ____________________________________________________________
consensus ATATCTTTCACAGTTTCACACTTTCACCTCTGGATCTGAAATAAAAAAACGTGCAAACTG
 
. : . : . : . : . : . :
rJMCP002B07+ TGACCGACCGACAAGTCCTTTGTTTCCTTCCAACGTTGTTAACATAATTATTGGTCACTG
JMCP002H10+ TGACCGACCGACAAGTCCTTTGTTTCCTTCCAACGTTGTTAACATAATTATTGGTCACTG
                      ____________________________________________________________
consensus TGACCGACCGACAAGTCCTTTGTTTCCTTCCAACGTTGTTAACATAATTATTGGTCACTG