Contig 003015:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010G23Sequence267001006 (3)706003015 (3)emb|CDP14910.1|4e-102unnamed protein product [Coffea canephora]
JMSF023J20Sequence610001006 (3)ref|XP_002267234.1|3e-48PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9 [Vitis vinifera] emb|CBI15309.746003015 (3)emb|CDP14910.1|5e-104unnamed protein product [Coffea canephora]
JMSF052A18Sequence656001006 (3)ref|XP_002267234.1|8e-59PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9 [Vitis vinifera] emb|CBI15309.926003015 (3)ref|XP_009631975.1|6e-138PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9 isoform X1 [Nicotiana tomento

Alignment

This contig is upended


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rJMSF052A18+                                            TCAAAAAGGGACCCAAAACTCTACTT
                      ____________________________________________________________
consensus                                               TCAAAAAGGGACCCAAAACTCTACTT
 
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rJMSF052A18+          AACATATGCATGTGCCTTGTATGATCATTATAAGAAAAAGTACTACATGCTTAATAATAG
                      ____________________________________________________________
consensus             AACATATGCATGTGCCTTGTATGATCATTATAAGAAAAAGTACTACATGCTTAATAATAG
 
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rJMSF052A18+          TGAAAAGCCTGCTAATGCAGAAATGCCCATTGTGATTAATACCCCTGGCTGGGTAAAAGG
                      ____________________________________________________________
consensus             TGAAAAGCCTGCTAATGCAGAAATGCCCATTGTGATTAATACCCCTGGCTGGGTAAAAGG
 
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rJMSF023J20+                                         AAATATANTTCTCCTAGTCATGTTGTCAA
rJMSF010G23+                                                   CTCCTAGTCATGTTGTCAA
rJMSF052A18+          CATTGGCTATGAAATACTTGTGGATATCTTGAAATATATTTCTCCTAGTCATGTTGTCAA
                      ____________________________________________________________
consensus             CATTGGCTATGAAATACTTGTGGATATCTTGAAATATATTTCTCCTAGTCATGTTGTCAA
 
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rJMSF023J20+          GATTCGCATATCTGCTGAGAGCAAGAATCTACCACCGGGGGCATTTTGGCTAGATGAAGG
rJMSF010G23+          GATTCGCATATCTGCTGAGAGCAAGAATCTACCACCGGGGGCATTTTGGCTAGATGAAGG
rJMSF052A18+          GATTCGCATATCTGCTGAGAGCAAGAATCTACCACCGGGGGCATTTTGGCTAGATGAAGG
                      ____________________________________________________________
consensus             GATTCGCATATCTGCTGAGAGCAAGAATCTACCACCGGGGGCATTTTGGCTAGATGAAGG
 
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rJMSF023J20+          GGAAGCTCCAGTGACAAACCTAATTGAAATCAATTCAGCCCGTCAGGACTCTTCACGAAG
rJMSF010G23+          GGAAGCTCCAGTGACAAACCTAATTGAAATCAATTCAGCCCGTCAGGACTCTTCACGAAG
rJMSF052A18+          GGAAGCTCCAGTGACAAACCTAATTGAAATCAATTCAGCCCGTCAGGACTCTTCACGAAG
                      ____________________________________________________________
consensus             GGAAGCTCCAGTGACAAACCTAATTGAAATCAATTCAGCCCGTCAGGACTCTTCACGAAG
 
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rJMSF023J20+          ATCGATTCTGGTGCAGAAGGATGCACGACTTCTGAGGGACCTTCGTATCATAGCTTATTT
rJMSF010G23+          ATCGATTCTGGTGCAGAAGGATGCACGACTTCTGAGGGACCTTCGTATCATAGCTTATTT
rJMSF052A18+          ATCGATTCTGGTGCAGAAGGATGCACGACTTCTGAGGGACCTTCGTATCATAGCTTATTT
                      ____________________________________________________________
consensus             ATCGATTCTGGTGCAGAAGGATGCACGACTTCTGAGGGACCTTCGTATCATAGCTTATTT
 
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rJMSF023J20+          TAGACAATGTTTTCCAAATGATGCTAATATCACTACATCCAAGGAACTAGCTCATGCATT
rJMSF010G23+          TAGACAATGTTTTCCAAATGATGCTAATATCACTACATCCAAGGAACTAGCTCATGCATT
rJMSF052A18+          TAGACAATGTTTTCCAAATGATGCTAATATCACTACATCCAAGGAACTAGCTCATGCATT
                      ____________________________________________________________
consensus             TAGACAATGTTTTCCAAATGATGCTAATATCACTACATCCAAGGAACTAGCTCATGCATT
 
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rJMSF023J20+          AGCTGCACATCCTCCATATGAGATATCTATATCAAGTGTCAAAATTAAGCACCTTCACTG
rJMSF010G23+          AGCTGCACATCCTCCATATGAGATATCTATATCAAGTGTCAAAATTAAGCACCTTCACTG
rJMSF052A18+          AGCTGCACATCCTCCATATGAGATATCTATATCAAGTGTCAAAATTAAGCACCTTCACTG
                      ____________________________________________________________
consensus             AGCTGCACATCCTCCATATGAGATATCTATATCAAGTGTCAAAATTAAGCACCTTCACTG
 
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rJMSF023J20+          CCAGGTACCCAAGGATGAGGTTTTCTACAGCTTGAATGCAACAATTGTTGGCTTGGCCGT
rJMSF010G23+          CCAGGTACCCAAGGATGAGGTTTTCTACAGCTTGAATGCAACAATTGTTGGCTTGGCCGT
rJMSF052A18+          CCAGGTACCCAAGGATGAGGTTTTCTACAGCTTGAATGCAACAATTGTTGGCTTGGCCGT
                      ____________________________________________________________
consensus             CCAGGTACCCAAGGATGAGGTTTTCTACAGCTTGAATGCAACAATTGTTGGCTTGGCCGT
 
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rJMSF023J20+          TAGCCCTGAAGATATGCCTCACTGTGTTGGTTTAGGAATTGTGAGAGGCATTGACACCAC
rJMSF010G23+          TAGCCCTGAAGATATGCCTCACTGTGTTGGTTTAGGAATTGTGAGAGGCATTGACACCAC
rJMSF052A18+          TAGCCCTGAAGATATGCCTCACTGTGTTGGTTTAGGAATTGTGAGAGGCATTGACACCAC
                      ____________________________________________________________
consensus             TAGCCCTGAAGATATGCCTCACTGTGTTGGTTTAGGAATTGTGAGAGGCATTGACACCAC
 
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rJMSF023J20+          CAGGCAGGTCATCTATTTAATTACTCCTGTGCCATTGGACAGTCTGGAAAAGGTTGATCT
rJMSF010G23+          CAGGCAGGTCATCTATTTAATTACTCCTGTGCCATTGGACAGTCTGGAAAAGGTTGATCT
rJMSF052A18+          CAGGCAGGTCATCTATTTAATTACTCCTGTGCCATTGGACAGTCTGGAAAAGGTTGATCT
                      ____________________________________________________________
consensus             CAGGCAGGTCATCTATTTAATTACTCCTGTGCCATTGGACAGTCTGGAAAAGGTTGATCT
 
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rJMSF023J20+          TTTGCTGCAGGGTTTTATTGAAATTCCTACTTCTTTATTGCAAGTTCAAGGCTGCATTTC
rJMSF010G23+          TTTGCTGCAGGGTTTTATTGAAATTCCTACTTCTTTATTGCAAGTTCAAGGCTGCATTTC
rJMSF052A18+          TTTGCTGCAGGGTTTTATTGAAATTCCTACTTCTTTATTGCAAGTTCAAGGCTGCATTTC
                      ____________________________________________________________
consensus             TTTGCTGCAGGGTTTTATTGAAATTCCTACTTCTTTATTGCAAGTTCAAGGCTGCATTTC
 
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rJMSF023J20+          ACCTTACATGTCTGCCAATGTATTGCCTGCATATTAGGAGACCAATAGTGGTGCTTGTTA
rJMSF010G23+          ACCTTACATGTCTGCCAATGTATTGCCTGCATATTAGGAGACCAATAGTGGTGCTTGTTA
rJMSF052A18+          ACCTTACATGTCTGCCAATGTATTGCCTGCATATTAGGAGACCAATAGTGGTGCTTGTTA
                      ____________________________________________________________
consensus             ACCTTACATGTCTGCCAATGTATTGCCTGCATATTAGGAGACCAATAGTGGTGCTTGTTA
 
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rJMSF023J20+          GAATTAGATTATTAGTTAAGTAGTAGTTTGCAAAATTAAATTACTGAGGTTAGATATCCT
rJMSF010G23+          GAATTAGATTATTAGTTAAGTAGTAGTTTGCAAAATTAAATTACTGAGGTTAGATATCCT
rJMSF052A18+          GAATTAGATTATTAGTTAAGTAGTAGTTTGCAAAATTAAATTACTGAGGTTAGATATCCT
                      ____________________________________________________________
consensus             GAATTAGATTATTAGTTAAGTAGTAGTTTGCAAAATTAAATTACTGAGGTTAGATATCCT
 
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rJMSF023J20+          CTTAATAGGAATTCTAATATATCGAACAACAAATGTACTGTCAGACGATGAAGTGTT   
rJMSF010G23+          CTTAATAGGAATTCTAATATATCGAAC                                 
rJMSF052A18+          CTTAATAGGAATTCTAATATATCGAACAACAAATGTACTGTCAGACGATGAAGTGTTGAT
                      ____________________________________________________________
consensus             CTTAATAGGAATTCTAATATATCGAACAACAAATGTACTGTCAGACGATGAAGTGTTGAT