Contig 002983:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030N15Sequence636003227 (144)ref|XP_011096521.1|7e-116PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like [Sesamum indi222002983 (3)
JMSF046K23Sequence752002983 (3)ref|XP_010093656.1|2e-86Protein ODORANT1 [Morus notabilis] gb|EXB54436.1| Protein ODORANT1 [Morus notabi651002983 (3)

Alignment

This contig is upended


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JMSF046K23-                                                  GTGGCATGCTCATCCATCATT
                      ____________________________________________________________
consensus                                                    GTGGCATGCTCATCCATCATT
 
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JMSF046K23-           CATTCTCTCATATATATAAAGGAAGGTGGTGATCGAGTGGGCCTCTGGGACAGATCCGTA
                      ____________________________________________________________
consensus             CATTCTCTCATATATATAAAGGAAGGTGGTGATCGAGTGGGCCTCTGGGACAGATCCGTA
 
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JMSF046K23-           TCTGAGAAAAGTAATAATAATAATAATTCTTTTCTTCTTCTTCTTCTTCATTTGGCTCCA
                      ____________________________________________________________
consensus             TCTGAGAAAAGTAATAATAATAATAATTCTTTTCTTCTTCTTCTTCTTCATTTGGCTCCA
 
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JMSF046K23-           AGGATTAGCTAGGTAGAGCATTGCAGCAAGATTGCTTAATTGTTATGGGCAGGCAACCTT
                      ____________________________________________________________
consensus             AGGATTAGCTAGGTAGAGCATTGCAGCAAGATTGCTTAATTGTTATGGGCAGGCAACCTT
 
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JMSF046K23-           GCTGTGATAAGTTGGGTGTGAAGAAAGGGCCGTGGACTGCTGAGGAAGATAGGAAGCTCA
                      ____________________________________________________________
consensus             GCTGTGATAAGTTGGGTGTGAAGAAAGGGCCGTGGACTGCTGAGGAAGATAGGAAGCTCA
 
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JMSF046K23-           TCTCTTTCATCCTCACCAATGGCCACTGCTGCTGGCGCGCCGTCCCTAAGCTCGCCGGCC
                      ____________________________________________________________
consensus             TCTCTTTCATCCTCACCAATGGCCACTGCTGCTGGCGCGCCGTCCCTAAGCTCGCCGGCC
 
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JMSF046K23-           TCCGCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGACTAACTACCTCCGCCCCGACTTGA
                      ____________________________________________________________
consensus             TCCGCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGACTAACTACCTCCGCCCCGACTTGA
 
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JMSF046K23-           AGCGCGGCCTTCTTACTCAAGAGGAAGAGAAGCTGGTCATTGATCTCCATGCACGCCTCG
                      ____________________________________________________________
consensus             AGCGCGGCCTTCTTACTCAAGAGGAAGAGAAGCTGGTCATTGATCTCCATGCACGCCTCG
 
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JMSF046K23-           GCAACAGGTGGGCGAAAATTGCAGCAAGATTACCTGGGAGAACAGACAATGAGATCAAGA
                      ____________________________________________________________
consensus             GCAACAGGTGGGCGAAAATTGCAGCAAGATTACCTGGGAGAACAGACAATGAGATCAAGA
 
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JMSF046K23-           ACCATTGGAACACTCATATAAAGAAGAAGCTTATAAAGATGGGAGTAGATCCACTGACAC
                      ____________________________________________________________
consensus             ACCATTGGAACACTCATATAAAGAAGAAGCTTATAAAGATGGGAGTAGATCCACTGACAC
 
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JMSF046K23-           ATGAGCCATTACAGAAAGATGATGATGAAGAAATGCTGCCACCATCTTCATTATCACTAC
                      ____________________________________________________________
consensus             ATGAGCCATTACAGAAAGATGATGATGAAGAAATGCTGCCACCATCTTCATTATCACTAC
 
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JMSF046K23-           ATTCTGGTGATGATCAAAAGCTTAAACCTGCAGAGAATGATGATGATCTGGAAGAAGAGC
rJMSF046K23+                  GATGATCAAAAGCTTAAACCTGCAGAGAATGATGATGATNTGGAAGAAGAGC
                      ____________________________________________________________
consensus             ATTCTGGTGATGATCAAAAGCTTAAACCTGCAGAGAATGATGATGATCTGGAAGAAGAGC
 
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JMSF046K23-           TACCAAAAATGGAAGAACATCAACAGTGC-TCTAGCAAGGAAGCCATGTTTGCAGCAGGT
rJMSF046K23+          TACCAAAAATGGAAGAACATCAACAGTGCTTCTAGCAAGGAAGCCATGTTTGCAGCAGGT
                      ____________________________________________________________
consensus             TACCAAAAATGGAAGAACATCAACAGTGCTTCTAGCAAGGAAGCCATGTTTGCAGCAGGT
 
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JMSF046K23-           CCACAGGTGGAA                                                
rJMSF046K23+          CCNCAGGTGGAAGAAGCTGATTATGACCCATGGATGAGCCAGTTATTGTCAGACACNTTT
                      ____________________________________________________________
consensus             CCACAGGTGGAAGAAGCTGATTATGACCCATGGATGAGCCAGTTATTGTCAGACACNTTT
 
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rJMSF046K23+          TTCAACGATNTGTCATGGAGTTTTGGAGGAGATGAATGCNGTGACTTTGCCANGTCATCA
                      ____________________________________________________________
consensus             TTCAACGATNTGTCATGGAGTTTTGGAGGAGATGAATGCNGTGACTTTGCCANGTCATCA
 
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rJMSF046K23+          TCTTCTCATGGAAGCTCATCAGAATGGCTCNTGGATTTGCAAGATTTTGGNGAAGATCAA
                      ____________________________________________________________
consensus             TCTTCTCATGGAAGCTCATCAGAATGGCTCNTGGATTTGCAAGATTTTGGNGAAGATCAA
 
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rJMSF046K23+          AGCTGGGCNTTATTGCCTGGTAATCAGCCTCCCAAGAACATGGACNTGGNGATTCNCNCC
                      ____________________________________________________________
consensus             AGCTGGGCNTTATTGCCTGGTAATCAGCCTCCCAAGAACATGGACNTGGNGATTCNCNCC
 
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rJMSF046K23+          CNGGATATAATATAAGCTGGAAGTTNTGNTGATATATNTGATGGACATGTGATCATCNCG
                      ____________________________________________________________
consensus             CNGGATATAATATAAGCTGGAAGTTNTGNTGATATATNTGATGGACATGTGATCATCNCG
 
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rJMSF030N15+               TTAAAGTATNAACAATTTTNCCNGTCCTGCNAACNTGNAGAATAAGAATACNANN
rJMSF046K23+          NGATNTTAATGTATAAACAATTTTACCNGTCCTGCAAACTTGAAGAATAAGAATACNATA
                      ____________________________________________________________
consensus             NGATNTTAATGTATAAACAATTTTACCNGTCCTGCAAACTTGAAGAATAAGAATACNATA
 
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rJMSF030N15+          TAAAGCGTGGTTTGAAGGGGCTTAAATTTCCCNTTTTTTTTTTCTTTTTTCCTGAAAAGA
rJMSF046K23+          TAAAGCGTGGTTTGAAGGGGCTTAAATTTCCCTTTTTTTTTTTCTTTTTTCCTGAAAAGA
                      ____________________________________________________________
consensus             TAAAGCGTGGTTTGAAGGGGCTTAAATTTCCCTTTTTTTTTTTCTTTTTTCCTGAAAAGA
 
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rJMSF030N15+          ATGTATTAAGGACTGAAGCTTGCCCCGCTCCAAGGAGATNGAGAGGCTGAGAAACNGNTA
rJMSF046K23+          ATGTATTAAGGA-TGAAGCTTGCCCCGCTCCAAGGAGATTGAGAGGCTGAGAAACTGATA
                      ____________________________________________________________
consensus             ATGTATTAAGGACTGAAGCTTGCCCCGCTCCAAGGAGATTGAGAGGCTGAGAAACTGATA
 
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rJMSF030N15+          ATATATATT                                                   
rJMSF046K23+          ATATATATTACTGGGTATGAATTAAGAAATGTAGTTTGAAAACAAAGCCATATGTAAGAG
                      ____________________________________________________________
consensus             ATATATATTACTGGGTATGAATTAAGAAATGTAGTTTGAAAACAAAGCCATATGTAAGAG