Contig 002974:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF044O02Sequence769006495 (3)ref|XP_009621944.1|8e-117PREDICTED: ferric reduction oxidase 2-like isoform X2 [Nicotiana tomentosiformi709002974 (2)ref|XP_009800599.1|9e-70PREDICTED: ferric reduction oxidase 2-like isoform X2 [Nicotiana sylvestris]
JMSF050H13Sequence721006495 (3)ref|XP_009621944.1|1e-128PREDICTED: ferric reduction oxidase 2-like isoform X2 [Nicotiana tomentosiformi731002974 (2)ref|XP_009800599.1|8e-82PREDICTED: ferric reduction oxidase 2-like isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050H13+           TACATAACAAGAGAAACCCAGCAAGCCACAATANTCCCAGAAAAACCCCAACCCCTTTG
                      ____________________________________________________________
consensus              TACATAACAAGAGAAACCCAGCAAGCCACAATANTCCCAGAAAAACCCCAACCCCTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050H13+          CTTCAAACCTAAGACCTCAGATGCACCCATATCCTCCATTTTT-GGCCCAAACAGCTCCC
rJMSF044O02+                     AGACCTCAGATGCACCCATATCNTCCATTTTTGGGCCCAAACAGCTCCC
                      ____________________________________________________________
consensus             CTTCAAACCTAAGACCTCAGATGCACCCATATCCTCCATTTTTGGGCCCAAACAGCTCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050H13+          TCTGGCTAGCTGCAATTATATCTGCTTCTTTCCTCATTTACCTTAGCCTGGTTGCCATTC
rJMSF044O02+          TCTGGCTAGCTGCAATTATATCTGCTTCTTTCCTCATTTACCNTAGCCTGGTTGCCANTC
                      ____________________________________________________________
consensus             TCTGGCTAGCTGCAATTATATCTGCTTCTTTCCTCATTTACCTTAGCCTGGTTGCCATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050H13+          TTTACCAGTACTATGTTTACCCCATGGACCATGGTACTAATAAGGTCTTCCCATACCACA
rJMSF044O02+          TTTACCAGTACTATGTTTACCCCANGGACCATGGTACTAATAAGGTCTTCCCATACCACA
                      ____________________________________________________________
consensus             TTTACCAGTACTATGTTTACCCCATGGACCATGGTACTAATAAGGTCTTCCCATACCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050H13+          CAAGGGCTTTGTTGAACATGTTGTTCATTTGCTTTGGCANTGTTGTCTCAGCAAGTGCAG
rJMSF044O02+          CAAGGGCTTTGTTGAACATGTTGTTCATTTGCTTTGGCANTGTTGTCTCAGCAAGTGCAG
                      ____________________________________________________________
consensus             CAAGGGCTTTGTTGAACATGTTGTTCATTTGCTTTGGCANTGTTGTCTCAGCAAGTGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050H13+          CTTTCTTGTGGAACAAGAAAAAGATTGCTAGGGAGGCTAAGCAGATTCAAGACATTGCAG
rJMSF044O02+          CTTTCTTGTGGAACAAGAAAAAGATTGCTAGGGAGGCTAAGCAGATTCAAGACATTGCAG
                      ____________________________________________________________
consensus             CTTTCTTGTGGAACAAGAAAAAGATTGCTAGGGAGGCTAAGCAGATTCAAGACATTGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050H13+          ACTCTACAAAGTCTATTACCACACTCTTGACCTATGCTGCTGATCAAGAACTCGAAAGCC
rJMSF044O02+          ACTCTACAAAGTCTATTACCACACTCTTGACCTATGCTGCTGATCAAGAACTCGAAAGCC
                      ____________________________________________________________
consensus             ACTCTACAAAGTCTATTACCACACTCTTGACCTATGCTGCTGATCAAGAACTCGAAAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050H13+          TTCCCANTCAATCTCTCACCGGATCAATCAACACTCATTATGGCAAAAGACCTGACCTCA
rJMSF044O02+          TTCCCANTCAATCTCTCACCGGATCAATCAACACTCATTATGGCAAAAGACCTGACCTCA
                      ____________________________________________________________
consensus             TTCCCANTCAATCTCTCACCGGATCAATCAACACTCATTATGGCAAAAGACCTGACCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050H13+          AGAGAATCCTGATGGAAATCAAAGGGTCGAGCGTGGGAGTGTTTGCGTCGGGACCCANGA
rJMSF044O02+          AGAGAATCCTGATGGAAATCAAAGGGTCGAGCGTGGGAGTGTTTGCGTCGGGACCCANGA
                      ____________________________________________________________
consensus             AGAGAATCCTGATGGAAATCAAAGGGTCGAGCGTGGGAGTGTTTGCGTCGGGACCCANGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050H13+          AGTTGAGGCACGATGTTGCANCCATATGTGGTTCTGGATTGGTGAATAACGTGACGTTCG
rJMSF044O02+          AGTTGAGGCACGATGTTGCANCCATATGTGGTTCTGGATTGGTGAATAACGTGACGTTCG
                      ____________________________________________________________
consensus             AGTTGAGGCACGATGTTGCANCCATATGTGGTTCTGGATTGGTGAATAACGTGACGTTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050H13+          AGTCCAATAGCTTTAACTGGTGATTTGCTTTTCGATCATATATATATGAATGATGAAGAA
rJMSF044O02+          AGTCCAATAGCTTTAACTGGTGATTTGCTTTTCGATCATATATATATGAATGATGAAGAA
                      ____________________________________________________________
consensus             AGTCCAATAGCTTTAACTGGTGATTTGCTTTTCGATCATATATATATGAATGATGAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF050H13+          AAGCGTATAATATAATATTAAAGATAATATGGATCCGAATAATAATAACTGCTCATC   
rJMSF044O02+          AAGCGTATAATATAATATTAAAGATAATATGGATCCGAATAATAATAACTGCTCATCAGC
                      ____________________________________________________________
consensus             AAGCGTATAATATAATATTAAAGATAATATGGATCCGAATAATAATAACTGCTCATCAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF044O02+          TCGTAGTATATATATATATATATATGTAGCAGATGTGTAATATACTAATATTGTCTCGAT
                      ____________________________________________________________
consensus             TCGTAGTATATATATATATATATATGTAGCAGATGTGTAATATACTAATATTGTCTCGAT