Contig 002972:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF044H04Sequence750002972 (2)ref|XP_011093184.1|355PREDICTED: rRNA-processing protein FCF1 homolog [Sesamum indicum] ref|XP_0110931772002972 (2)ref|XP_011093184.1|355PREDICTED: rRNA-processing protein FCF1 homolog [Sesamum indicum] ref|XP_0110931

Alignment

This contig is upended


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JMSF044H04-                                        GGGGCTTCTCCACTTTTCTCTCGTCTCTCAC
                      ____________________________________________________________
consensus                                          GGGGCTTCTCCACTTTTCTCTCGTCTCTCAC
 
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JMSF044H04-           CGCCTCACGCCCTCCGCCCTCCGCCCTCGGCGACGCTCCGGTCAGACTGTCCCTCGCTTC
                      ____________________________________________________________
consensus             CGCCTCACGCCCTCCGCCCTCCGCCCTCGGCGACGCTCCGGTCAGACTGTCCCTCGCTTC
 
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JMSF044H04-           ATCGACTCAGCGGCGACCGTACGGGACTCAGGCACTCAGTGGCTCTGCGGACCTCACCTC
                      ____________________________________________________________
consensus             ATCGACTCAGCGGCGACCGTACGGGACTCAGGCACTCAGTGGCTCTGCGGACCTCACCTC
 
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JMSF044H04-           AGCCACTCAGCACTCTGTGGCTCTGCTTCACTAAGTCACTGAACTCCGAACAACTGTGAT
                      ____________________________________________________________
consensus             AGCCACTCAGCACTCTGTGGCTCTGCTTCACTAAGTCACTGAACTCCGAACAACTGTGAT
 
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JMSF044H04-           CGCACAATGGGAAAAGCTAAGAAGTCCCCCAAATTCGCCGTTATGAAGAAAATTGTGACT
                      ____________________________________________________________
consensus             CGCACAATGGGAAAAGCTAAGAAGTCCCCCAAATTCGCCGTTATGAAGAAAATTGTGACT
 
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JMSF044H04-           CATAAAGCTATCAAACAGCATAAAGAGGAGGTTTTGAACCCAAAGAAGAAAGATTTGAGC
rJMSF044H04+                  TATCAANCAGCATAAAGAGGAGGTTTTGAACCCAAAGAAGAAAGATTTGAGC
                      ____________________________________________________________
consensus             CATAAAGCTATCAAACAGCATAAAGAGGAGGTTTTGAACCCAAAGAAGAAAGATTTGAGC
 
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JMSF044H04-           AAAGAGAAGCTCCCGCGGAACGTGCCTTATGTTTCTTCTGCCCTCTTCTTCAAGTATAAC
rJMSF044H04+          AAAGAGAAGCTCCCGCGGAACGTGCCTTATGTTTCTTCTGCCCTCTTCTTCAAGTATAAC
                      ____________________________________________________________
consensus             AAAGAGAAGCTCCCGCGGAACGTGCCTTATGTTTCTTCTGCCCTCTTCTTCAAGTATAAC
 
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JMSF044H04-           ACTGCCTTGGGACCCCCTTATAGAGTGTTGGTCGATACCAACTTTATCAATTTCTCCATT
rJMSF044H04+          ACTGCCTTGGGACCCCCTTATAGAGTGTTGGTCGATACCAACTTTATCAATTTCTCCATT
                      ____________________________________________________________
consensus             ACTGCCTTGGGACCCCCTTATAGAGTGTTGGTCGATACCAACTTTATCAATTTCTCCATT
 
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JMSF044H04-           CAGAATAAATTGGATTTGGAGAAAGGAATGATGGATTGCTTGTATGCAAAATGCACTCCT
rJMSF044H04+          CAGAATAAATTGGATTTGGAGAAAGGAATGATGGATTGCTTGTATGCAAAATGCACTCCT
                      ____________________________________________________________
consensus             CAGAATAAATTGGATTTGGAGAAAGGAATGATGGATTGCTTGTATGCAAAATGCACTCCT
 
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JMSF044H04-           TGTATTACGGACTGTGTGATGGCTGAGCTTGAGAAGCTGGGTCAAAAATACCGAGTTGCC
rJMSF044H04+          TGTATTACGGACTGTGTGATGGCTGAGCTTGAGAAGCTGGGTCAAAAATACCGAGTTGCC
                      ____________________________________________________________
consensus             TGTATTACGGACTGTGTGATGGCTGAGCTTGAGAAGCTGGGTCAAAAATACCGAGTTGCC
 
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JMSF044H04-           CTCAGAATTGCCAAGGATCCTCGATTTGAAAGGCTTCCTTGTACTCATAAAGGAACTTAT
rJMSF044H04+          CTCAGAATTGCCAAGGATCCTCGATTTGAAAGGCTTCCTTGTACTCATAAAGGAACTTAT
                      ____________________________________________________________
consensus             CTCAGAATTGCCAAGGATCCTCGATTTGAAAGGCTTCCTTGTACTCATAAAGGAACTTAT
 
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JMSF044H04-           GCTGATGACTGTCTTGTTGATAGGGTTACCCAGCACAAGTGCTATATTGTTGCAACGTGT
rJMSF044H04+          GCTGATGACTGTCTTGTTGATAGGGTTACCCAGCACAAGTGCTATATTGTTGCAACGTGT
                      ____________________________________________________________
consensus             GCTGATGACTGTCTTGTTGATAGGGTTACCCAGCACAAGTGCTATATTGTTGCAACGTGT
 
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JMSF044H04-           GATCGAGATTTGAAGCGAAGGATCCGTAAGATACCTGGTGTACCAATCATGTATATCAC 
rJMSF044H04+          GATCGAGATTTGAAGCGAAGGATCCGTAAGATACCTGGTGTACCAATCATGTATATCACT
                      ____________________________________________________________
consensus             GATCGAGATTTGAAGCGAAGGATCCGTAAGATACCTGGTGTACCAATCATGTATATCACT
 
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rJMSF044H04+          CAACACAAATACTCAATTGAACGGATGCCTGAAGCAACAATTGGTGGAGCTCCAAGAATT
                      ____________________________________________________________
consensus             CAACACAAATACTCAATTGAACGGATGCCTGAAGCAACAATTGGTGGAGCTCCAAGAATT
 
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rJMSF044H04+          TGATGGTAATCTGTCAATCTGGCTGCGAGCTGTAACCGGCTAGCTAAATACATGATCAAA
                      ____________________________________________________________
consensus             TGATGGTAATCTGTCAATCTGGCTGCGAGCTGTAACCGGCTAGCTAAATACATGATCAAA
 
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rJMSF044H04+          GCATCTCTACCCCAAGAAACAAACTTCAGAGAGGAGCGAGGAAGGAGGGTATTTGGAATG
                      ____________________________________________________________
consensus             GCATCTCTACCCCAAGAAACAAACTTCAGAGAGGAGCGAGGAAGGAGGGTATTTGGAATG
 
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rJMSF044H04+          AAATTTTGTTTCAAAATTGATACTCTATAGCAATTGCATTAGTTCCTCCATTGTAACAAT
                      ____________________________________________________________
consensus             AAATTTTGTTTCAAAATTGATACTCTATAGCAATTGCATTAGTTCCTCCATTGTAACAAT
 
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rJMSF044H04+          TTTGGTTCTAGTACCGTACCTGGTGGCTTTACCACCACTGTCCATGTATTATTATTATAT
                      ____________________________________________________________
consensus             TTTGGTTCTAGTACCGTACCTGGTGGCTTTACCACCACTGTCCATGTATTATTATTATAT