| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF013B22 | Sequence | 478 | 002368 (5) | 747 | 002970 (5) | ||||||
| JMSF017C20 | Sequence | 493 | 002368 (5) | ref|XP_009622340.1| | 7e-05 | PREDICTED: probable galacturonosyltransferase 7 isoform X1 [Nicotiana tomentosi | 734 | 002970 (5) | ref|XP_006365314.1| | 5e-19 | PREDICTED: probable galacturonosyltransferase 7-like isoform X1 [Solanum tubero |
| JMSF024G17 | Sequence | 651 | 002368 (5) | ref|XP_009622342.1| | 3e-17 | PREDICTED: probable galacturonosyltransferase 7 isoform X3 [Nicotiana tomentosi | 709 | 002970 (5) | ref|XP_006365314.1| | 2e-15 | PREDICTED: probable galacturonosyltransferase 7-like isoform X1 [Solanum tubero |
| JMSF038B05 | Sequence | 702 | 002368 (5) | ref|XP_009622342.1| | 4e-17 | PREDICTED: probable galacturonosyltransferase 7 isoform X3 [Nicotiana tomentosi | 899 | 002970 (5) | ref|XP_009622342.1| | 3e-40 | PREDICTED: probable galacturonosyltransferase 7 isoform X3 [Nicotiana tomentosi |
| JMSF044D16 | Sequence | 745 | 002368 (5) | ref|XP_009622342.1| | 7e-29 | PREDICTED: probable galacturonosyltransferase 7 isoform X3 [Nicotiana tomentosi | 778 | 002970 (5) | gb|KHN29456.1| | 3e-09 | Putative galacturonosyltransferase 7 [Glycine soja] |
This contig is upended
. : . : . : . : . : . :
rJMSF038B05+ ATGTCGNTGATCTAGTCAGGGGGGGGGAGCAAGACCTTTCAGGAAAGTTTGAAAGGCT
____________________________________________________________
consensus ATGTCGNTGATCTAGTCAGGGGGGGGGAGCAAGACCTTTCAGGAAAGTTTGAAAGGCT
. : . : . : . : . : . :
rJMSF038B05+ GGTACAAGAGTTGGGGACAAAAGAGGCTGTGACTCTGCGGGCCTTCTTGCTAACCTTTCA
____________________________________________________________
consensus GGTACAAGAGTTGGGGACAAAAGAGGCTGTGACTCTGCGGGCCTTCTTGCTAACCTTTCA
. : . : . : . : . : . :
rJMSF017C20+ ATGAGAACTGGGTACTATCTGGACTGGGTTATAACTTTAG
rJMSF024G17+ CTGGGTTATAACTTTAG
rJMSF038B05+ AGGCGAAGTTTATGCTCTTGATGAGAACTGGGTACTATCTGGACTGGGTTATAACTTTAG
____________________________________________________________
consensus AGGCGAAGTTTATGCTCTTGATGAGAACTGGGTACTATCTGGACTGGGTTATAACTTTAG
. : . : . : . : . : . :
rJMSF017C20+ TCTGGGTACAGAAGCTGTGAAGAACGCAAGGGTTTTGCATTATAATGGTGACATGAAACC
rJMSF024G17+ TCTGGGTACAGAAGCTGTGAAGAACGCAAGGGTTTTGCATTATAATGGTGACATGAAACC
rJMSF038B05+ TCTGGGTACAGAAGCTGTGAAGAACGCAAGGGTTTTGCATTATAATGGTGACATGAAACC
rJMSF013B22+ TATAATGGTGACANGAAACC
rJMSF044D16+ TTTTGCATTATAATGGTGACATGAAACC
____________________________________________________________
consensus TCTGGGTACAGAAGCTGTGAAGAACGCAAGGGTTTTGCATTATAATGGTGACATGAAACC
. : . : . : . : . : . :
rJMSF017C20+ ATGGCTTGATTTGGCCATCCATGATTACGCAGATTTTTGGAGCAACTATATAAACACGGA
rJMSF024G17+ ATGGCTTGATTTGGCCATCCATGATTACGCAGATTTTTGGAGCAACTATATAAACACGGA
rJMSF038B05+ ATGGCTTGATTTGGCCATCCATGATTACGCAGATTTTTGGAGCAACTATATAAACACGGA
rJMSF013B22+ ATGGCTTGA-TTGGCCATCCATGATTACGCAGATTTTTGGAGCAACTATATAAACACGGA
rJMSF044D16+ ATGGCTTGATTTGGCCATCCATGATTACGCAGATTTTTGGAGCAACTATATAAACACGGA
____________________________________________________________
consensus ATGGCTTGATTTGGCCATCCATGATTACGCAGATTTTTGGAGCAACTATATAAACACGGA
. : . : . : . : . : . :
rJMSF017C20+ AGATCAATTGCTAAGCAATTGCAATGTGAATTATTAGAGTTAAAGTTAGATTCAAGGTAT
rJMSF024G17+ AGATCAATTGCTAAGCAATTGCAATGTGAATTATTAGAGTTAAAGTTAGATTCAAGGTAT
rJMSF038B05+ AGATCAATTGCTAAGCAATTGCAATGTGAATTATTAGAGTTAAAGTTAGATTCAAGGTAT
rJMSF013B22+ AGATCAATTGCTAAGCAATTGCAATGTGAATTATTAGAGTTAAAGTTAGATTCAAGGTAT
rJMSF044D16+ AGATCAATTGCTAAGCAATTGCAATGTGAATTATTAGAGTTAAAGTTAGATTCAAGGTAT
____________________________________________________________
consensus AGATCAATTGCTAAGCAATTGCAATGTGAATTATTAGAGTTAAAGTTAGATTCAAGGTAT
. : . : . : . : . : . :
rJMSF017C20+ TTTGCAGGGATCACAAGGTTACACAAATTTCCCTCTGGTGGATGCCGATAGAATCATTCC
rJMSF024G17+ TTTGCAGGGATCACAAGGTTACACAAATTTCCCTCTGGTGGATGCCGATAGAATCATTCC
rJMSF038B05+ TTTGCAGGGATCACAAGGTTACACAAATTTCCCTCTGGTGGATGCCGATAGAATCATTCC
rJMSF013B22+ TTTGCAGGGATCACAAGGTTACACAAATTTCCCTCTGGTGGATGCCGATAGAATCATTCC
rJMSF044D16+ TTTGCAGGGATCACAAGGTTACACAAATTTCCCTCTGGTGGATGCCGATAGAATCATTCC
____________________________________________________________
consensus TTTGCAGGGATCACAAGGTTACACAAATTTCCCTCTGGTGGATGCCGATAGAATCATTCC
. : . : . : . : . : . :
rJMSF017C20+ AAGCTCAGAGGACTTGGCTCCTGGTACTAGGATTACAAATTCAAAGATCGTGTTTCTATC
rJMSF024G17+ AAGCTCAGAGGACTTGGCTCCTGGTACTAGGATTACAAATTCAAAGATCGTGTTTCTATC
rJMSF038B05+ AAGCTCAGAGGACTTGGCTCCTGGTACTAGGATTACAAATTCAAAGATCGTGTTTCTATC
rJMSF013B22+ AAGCTCAGAGGACTTGGCTCCTGGTACTAGGATTACAAATTCAAAGATCGTGTTTCTATC
rJMSF044D16+ AAGCTCAGAGGACTTGGCTCCTGGTACTAGGATTACAAATTCAAAGATCGTGTTTCTATC
____________________________________________________________
consensus AAGCTCAGAGGACTTGGCTCCTGGTACTAGGATTACAAATTCAAAGATCGTGTTTCTATC
. : . : . : . : . : . :
rJMSF017C20+ ATTCAATCTCCTGCCCGTCAAGCCAAGAGGGAGTGCATTCGTTTGTGGCAGAGGTGGACA
rJMSF024G17+ ATTCAATCTCCTGCCCGTCAAGCCAAGAGGGAGTGCATTCGTTTGTGGCAGAGGTGGACA
rJMSF038B05+ ATTCAATCTCCTGCCCGTCAAGCCAAGAGGGAGTGCATTCGTTTGTGGCAGAGGTGGACA
rJMSF013B22+ ATTCAATCTCCTGCCCGTCAAGCCAAGAGGGAGTGCATTCGTTTGTGGCAGAGGTGGACA
rJMSF044D16+ ATTCAATCTCCTGCCCGTCAAGCCAAGAGGGAGTGCATTCGTTTGTGGCAGAGGTGGACA
____________________________________________________________
consensus ATTCAATCTCCTGCCCGTCAAGCCAAGAGGGAGTGCATTCGTTTGTGGCAGAGGTGGACA
. : . : . : . : . : . :
rJMSF017C20+ TAGAGAACTTTGACAGACAACAGGGCATTACCTCTGCGCTTTCTGCCTCGAGACTGGACC
rJMSF024G17+ TAGAGAACTTTGACAGACAACAGGGCATTACCTCTGCGCTTTCTGCCTCGAGACTGGACC
rJMSF038B05+ TAGAGAACTTTGACAGACAACAGGGCATTACCTCTGCGCTTTCTGCCTCGAGACTGGACC
rJMSF013B22+ TAGAGAACTTTGACAGACAACAGGGCATTACCTCTGCGCTTTCTGCCTCGAGACTGGACC
rJMSF044D16+ TAGAGAACTTTGACAGACAACAGGGCATTACCTCTGCGCTTTCTGCCTCGAGACTGGACC
____________________________________________________________
consensus TAGAGAACTTTGACAGACAACAGGGCATTACCTCTGCGCTTTCTGCCTCGAGACTGGACC
. : . : . : . : . : . :
rJMSF017C20+ ACAGAAATATGAATTCTGGTGTGTACAAAAAAGCCATGTGACTATTCTTTCAACTGTGGG
rJMSF024G17+ ACAGAAATATGAATTCTGGTGTGTACAAAAAAGCCATGTGACTATTCTTTCAACTGTGGG
rJMSF038B05+ ACAGAAATATGAATTCTGGTGTGTACAAAAAAGCCATGTGACTATTCTTTCAACTGTGGG
rJMSF013B22+ ACAGAAATATGAATTCTGGTGTGTACAAAAAAGCCATGTGACTATTCTTTCAACTGTGGG
rJMSF044D16+ ACAGAAATATGAATTCTGGTGTGTACAAAAAAGCCATGTGACTATTCTTTCAACTGTGGG
____________________________________________________________
consensus ACAGAAATATGAATTCTGGTGTGTACAAAAAAGCCATGTGACTATTCTTTCAACTGTGGG
. : . : . : . : . : . :
rJMSF017C20+ AACTTTATATTTGTTTATATTTTTACGTTTGCTTCCTGGAGACTTCAATATATTCGTAAG
rJMSF024G17+ AACTTTATATTTGTTTATATTTTTACGTTT-CTTCCTGGAGACTTCAATATATTCGTAAG
rJMSF038B05+ AACTTTATATTTGTTTATATTTTTACGTTTGCTTCCTGGAGACTTCAATATATTCGTAAG
rJMSF013B22+ AACTTTATATTTGTTTATATTTTTACGTTTGCTTCCTGGAGACTTCAATATATTCGTAAG
rJMSF044D16+ AACTTTATATTTGTTTATATTTTTACGTTTGCTTCCTGGAGACTTCAATACATTCGTAAG
____________________________________________________________
consensus AACTTTATATTTGTTTATATTTTTACGTTTGCTTCCTGGAGACTTCAATATATTCGTAAG
. : . : . : . : . : . :
rJMSF017C20+ AGCAGATGGTTCAAGTCCAAATCTCTGAATCGGCAAAACACGCATTGAACCTCCTGTCTT
rJMSF024G17+ AGCAGATGGTTCAAGTCCAAATCTCTGAATCGGCAAAACACGCATTGAACCTCCTGTCTT
rJMSF038B05+ AGCAGATGGTTCAAGTCCAAATCTCTGAATCGGCAAAACACGCATTGAACCTCCTGTCTT
rJMSF013B22+ AGCAGATGGTTCAAGTCCAAATCTCTGAATCGGCAAAACACGCATTGAACCTCCTGTCTT
rJMSF044D16+ AGCAGATGGTTCAAGTCCAAATCTCTGAATCGGCAAAACACGCATTGAACCTCCTGTCTT
____________________________________________________________
consensus AGCAGATGGTTCAAGTCCAAATCTCTGAATCGGCAAAACACGCATTGAACCTCCTGTCTT
. : . : . : . : . : . :
rJMSF017C20+ GTGGATTATCATTGCATAGACATTTTGTTTCTTATTCATTGTTAAATAGCGTTTGCTTCT
rJMSF024G17+ GTGGATTATCATTGCATAGACATTTTGTTTCTTATTCATTGTTAAATAGCGTTTGCTTCT
rJMSF038B05+ GTGGATTATCATTGCATAGACATTTTGTTTCTTATTCATTGTTAAATAGCGTTTGCTTCT
rJMSF013B22+ GTGGATTATCATTGCATAGACATTTTGTTTCTTATTCATTGTTAAATAGCGTTTGCTTCT
rJMSF044D16+ GTGGATTATCATTGCATAGACATTTTGTTTCTTATTCATTGTTAAATAGCGTTTGCTTCT
____________________________________________________________
consensus GTGGATTATCATTGCATAGACATTTTGTTTCTTATTCATTGTTAAATAGCGTTTGCTTCT
. : . : . : . : . : . :
rJMSF017C20+ CTAACAGTTAGCAGATTTAAATTTTCCAATTTTT
rJMSF024G17+ CTAACAGTTAGCAGANTTAAATTTTCCAATTTT
rJMSF038B05+ CTAACAGTTAGCAGATTTAAATTTTCCAA-TTTTTTTCTTTTAGATTACAAAATATGTAA
rJMSF013B22+ CTAACAGTTAGCAGATTTAAATTTTCCAATTTTTTTTCTTTTAGATTACAAAATATGTAA
rJMSF044D16+ CTAACAGTTAGCAGATTTAAATTTTCCAA-TTTTTTTCTTTTAGATTACAAAATATGTAA
____________________________________________________________
consensus CTAACAGTTAGCAGATTTAAATTTTCCAATTTTTTTTCTTTTAGATTACAAAATATGTAA
. : . : . : . : . : . :
rJMSF038B05+ TA
rJMSF013B22+ TATATATATGAAATATTTAATCATAGTTTTCTTTCCCACTTTGAAGTCTCTTTT
rJMSF044D16+ TATATATATGAAATATTTAATCATAGTTTTCTTTCCCACTTTGAAGTCTCTTTTTGGGAT
____________________________________________________________
consensus TATATATATGAAATATTTAATCATAGTTTTCTTTCCCACTTTGAAGTCTCTTTTTGGGAT