Contig 002964:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035L14Sequence653002352 (3)emb|CDP14901.1|1e-64unnamed protein product [Coffea canephora]652002964 (3)ref|XP_009619557.1|2e-45PREDICTED: basic proline-rich protein [Nicotiana tomentosiformis]
JMSF042G05Sequence804002352 (3)emb|CDP14901.1|5e-66unnamed protein product [Coffea canephora]814002964 (3)ref|XP_009619557.1|7e-45PREDICTED: basic proline-rich protein [Nicotiana tomentosiformis]
JMSF043L12Sequence793002352 (3)emb|CDP14901.1|2e-66unnamed protein product [Coffea canephora]767002964 (3)ref|XP_009619557.1|3e-45PREDICTED: basic proline-rich protein [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF042G05+ TCCGCCACCTCCACNTCCTCCAAGGCAACAGCCN
                      ____________________________________________________________
consensus TCCGCCACCTCCACNTCCTCCAAGGCAACAGCCN
 
. : . : . : . : . : . :
rJMSF042G05+ TTTAGTTCCTGGACCTGCTATAATCCCATCTTTGCAAACTGATATGTTGCCTCCAGGAAT
                      ____________________________________________________________
consensus TTTAGTTCCTGGACCTGCTATAATCCCATCTTTGCAAACTGATATGTTGCCTCCAGGAAT
 
. : . : . : . : . : . :
rJMSF042G05+ TTCTCGGTTCCCTCCACCTTCACCTCCTACAGATATGAGGCCACCACCCGGAATTGTTGG
rJMSF043L12+ CCACCTTCACNTCCTACAGATATGAGGCCACCACCCGGAATTGTTGG
                      ____________________________________________________________
consensus TTCTCGGTTCCCTCCACCTTCACCTCCTACAGATATGAGGCCACCACCCGGAATTGTTGG
 
. : . : . : . : . : . :
rJMSF035L14+ TCCTCCCCCTGGAGTAATGGTTCCACTAATTCCTAGGCCACCCTTTGGACCTCC
rJMSF042G05+ CCAACCTCCTCCCCCTGGAGTAATGGTTCCACTAATTCCTAGGCCACCCTTTGGACCTCC
rJMSF043L12+ CCAACCTCCTCCCCCTGGAGTAATGGTTCCACTAATTCCTAGGCCACCCTTTGGACCTCC
                      ____________________________________________________________
consensus CCAACCTCCTCCCCCTGGAGTAATGGTTCCACTAATTCCTAGGCCACCCTTTGGACCTCC
 
. : . : . : . : . : . :
rJMSF035L14+ ACCGATGATGAGACCACCACTTCCGCCCGGGCCACCTCCTATGCCGCAGGATAGTACCAG
rJMSF042G05+ ACCGATGATGAGACCACCACTTCCGCCCGGGCCACCTCCTATGCCGCAGGATAGTACCAG
rJMSF043L12+ ACCGATGATGAGACCACCACTTCCGCCCGGGCCACCTCCTATGCCGCAGGATAGTACCAG
                      ____________________________________________________________
consensus ACCGATGATGAGACCACCACTTCCGCCCGGGCCACCTCCTATGCCGCAGGATAGTACCAG
 
. : . : . : . : . : . :
rJMSF035L14+ GCCACTCATTTCTCAAAAGCCATCCTATGTTAAATCAGCTGCATCAACGGTTATTAAGAG
rJMSF042G05+ GCCACTCATTTCTCAAAAGCCATCCTATGTTAAATCAGCTGCATCAACGGTTATTAAGAG
rJMSF043L12+ GCCACTCATTTCTCAAAAGCCATCCTATGTTAAATCAGCTGCATCAACGGTTATTAAGAG
                      ____________________________________________________________
consensus GCCACTCATTTCTCAAAAGCCATCCTATGTTAAATCAGCTGCATCAACGGTTATTAAGAG
 
. : . : . : . : . : . :
rJMSF035L14+ GCCTCTTGCTCAGCATACTCCAGAACTTACTGCTATGGTTCCTGCATCTGTGCGTGTTAA
rJMSF042G05+ GCCTCTTGCTCAGCATACTCCAGAACTTACTGCTATGGTTCCTGCATCTGTGCGTGTTAA
rJMSF043L12+ GCCTCTTGCTCAGCATACTCCAGAACTTACTGCTATGGTTCCTGCATCTGTGCGTGTTAA
                      ____________________________________________________________
consensus GCCTCTTGCTCAGCATACTCCAGAACTTACTGCTATGGTTCCTGCATCTGTGCGTGTTAA
 
. : . : . : . : . : . :
rJMSF035L14+ GAGAGAATCTGCTCTTCCAAAATCAAAACCAAAGCCATCAACAACAGTTGTGGCCAACCA
rJMSF042G05+ GAGAGAATCTGCTCTTCCAAAATCAAAACCAAAGCCATCAACAACAGTTGTGGCCAACCA
rJMSF043L12+ GAGAGAATCTGCTCTTCCAAAATCAAAACCAAAGCCATCAACAACAGTTGTGGCCAACCA
                      ____________________________________________________________
consensus GAGAGAATCTGCTCTTCCAAAATCAAAACCAAAGCCATCAACAACAGTTGTGGCCAACCA
 
. : . : . : . : . : . :
rJMSF035L14+ GCCCATGTTTACTGCAGCAGTTTTGAAGCAAGAATCCACCAGTTCATCTCAACCAAAGCC
rJMSF042G05+ GCCCATGTTTACTGCAGCAGTTTTGAAGCAAGAATCCACCAGTTCATCTCAACCAAAGCC
rJMSF043L12+ GCCCATGTTTACTGCAGCAGTTTTGAAGCAAGAATCCACCAGTTCATCTCAACCAAAGCC
                      ____________________________________________________________
consensus GCCCATGTTTACTGCAGCAGTTTTGAAGCAAGAATCCACCAGTTCATCTCAACCAAAGCC
 
. : . : . : . : . : . :
rJMSF035L14+ ACAAAGTATCGATGACTCTTATATGGCTTTCCTGGAGGACATGAAAGCTCTTGGTGCTCT
rJMSF042G05+ ACAAAGTATCGATGACTCTTATATGGCTTTCCTGGAGGACATGAAAGCTCTTGGTGCTCT
rJMSF043L12+ ACAAAGTATCGATGACTCTTATATGGCTTTCCTGGAGGACATGAAAGCTCTTGGTGCTCT
                      ____________________________________________________________
consensus ACAAAGTATCGATGACTCTTATATGGCTTTCCTGGAGGACATGAAAGCTCTTGGTGCTCT
 
. : . : . : . : . : . :
rJMSF035L14+ TGATGGCAACAAATGACCCAACGGATAGATGGAAACTTGGGAAGGTGCAAAAGGGACAAC
rJMSF042G05+ TGATGGCAACAAATGACCCAACGGATAGATGGAAACTTGGGAAGGTGCAAAAGGGACAAC
rJMSF043L12+ TGATGGCAACAAATGACCCAACGGATAGATGGAAACTTGGGAAGGTGCAAAAGGGACAAC
                      ____________________________________________________________
consensus TGATGGCAACAAATGACCCAACGGATAGATGGAAACTTGGGAAGGTGCAAAAGGGACAAC
 
. : . : . : . : . : . :
rJMSF035L14+ TAGTAGCTACGACTGTGTGTGTGATGTTCTAAGAATTTATTTAATAGGGCATCATGTTAT
rJMSF042G05+ TAGTAGCTACGACTGTGTGTGTGATGTTCTAAGAATTTATTTAATAGGGCATCATGTTAT
rJMSF043L12+ TAGTAGCTACGACTGTGTGTGTGATGTTCTAAGAATTTATTTAATAGGGCATCATGTTAT
                      ____________________________________________________________
consensus TAGTAGCTACGACTGTGTGTGTGATGTTCTAAGAATTTATTTAATAGGGCATCATGTTAT
 
. : . : . : . : . : . :
rJMSF035L14+ CCGATCTGGTGGAGGTTTGGGGGGGTAGGAGAGGAGGGTGTAGAAAGGACATTCTTTTCT
rJMSF042G05+ CCGATCTGGTGGAGGTTTGGGGGGGTAGGAGAGGAGGGTGTAGAAAGGACATTCTTTTCT
rJMSF043L12+ CCGATCTGGTGGAGGTTTGGGGGGGTAGGAGAGGAGGGTGTAGAAAGGACATTCTTTTCT
                      ____________________________________________________________
consensus CCGATCTGGTGGAGGTTTGGGGGGGTAGGAGAGGAGGGTGTAGAAAGGACATTCTTTTCT
 
. : . : . : . : . : . :
rJMSF035L14+ TGAATTTTCTACTTTTCCATTCTGGTTGGCAATCTGCTGTAGCCGGAC
rJMSF042G05+ TGAATTTTCTACTTTTCCATTCTGGTTGGCAATCTGCTGTAGCCGGAC
rJMSF043L12+ TGAATTTTCTACTTTTCCATTCTGGTTGGCAATCTGCTGTAGCCGGACAGAGTACGAATG
                      ____________________________________________________________
consensus TGAATTTTCTACTTTTCCATTCTGGTTGGCAATCTGCTGTAGCCGGACAGAGTACGAATG
 
. : . : . : . : . : . :
rJMSF043L12+ TACTACTTCAGATAAAGAATACTTTTGTTTCAGCTTACAAGTTGCCCACTAACTATATAT
                      ____________________________________________________________
consensus TACTACTTCAGATAAAGAATACTTTTGTTTCAGCTTACAAGTTGCCCACTAACTATATAT