| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011D13 | Sequence | 530 | 004493 (3) | ref|XP_006351734.1| | 245 | PREDICTED: uncharacterized protein LOC102593259 [Solanum tuberosum] | 713 | 002958 (3) | ref|XP_009600013.1| | 152 | PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis] |
| JMSF042I21 | Sequence | 764 | 004493 (3) | ref|XP_009600013.1| | 258 | PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis] | 710 | 002958 (3) | ref|XP_009600013.1| | 157 | PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis] |
| JMSF047P05 | Sequence | 692 | 004493 (3) | ref|XP_009600013.1| | 258 | PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis] | 740 | 002958 (3) | ref|XP_009600013.1| | 157 | PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF047P05+ TTTAATAGTGTAGGGGCATCA
____________________________________________________________
consensus TTTAATAGTGTAGGGGCATCA
. : . : . : . : . : . :
rJMSF047P05+ AAGGGTGGGGCTAGTCATAAGAGTGTGACTCCAA-GGATTTATGTTGATGATAACGATGA
rJMSF042I21+ CTAGTCATAAGAGTGTGACTCCAANGGATTTATGTTGATGATAACGATGA
____________________________________________________________
consensus AAGGGTGGGGCTAGTCATAAGAGTGTGACTCCAANGGATTTATGTTGATGATAACGATGA
. : . : . : . : . : . :
rJMSF047P05+ TGATGATGATGTGCTTGTAGGACTATCAGACTCAGGTGAGGAATCAGATGAGGATTGGCG
rJMFF011D13+ GGACTATCAGACTCAGGTGAGGAATCAGATGAGGATTGGCG
rJMSF042I21+ TGATGATGATGTGCTTGTAGGACTATCAGACTCAGGTGAGGAATCAGATGAGGATTGGCG
____________________________________________________________
consensus TGATGATGATGTGCTTGTAGGACTATCAGACTCAGGTGAGGAATCAGATGAGGATTGGCG
. : . : . : . : . : . :
rJMSF047P05+ AGGTGAGAAGAGGAAGAAATCAAAAAGCTTGAAGGGAAAAGGGATGAAGACATTGACTCC
rJMFF011D13+ AGGTGAGAAGAGGAAGAAATCAAAAAGCTTGAAGGGAAAAGGGATGAAGACATTGACTCC
rJMSF042I21+ AGGTGAGAAGAGGAAGAAATCAAAAAGCTTGAAGGGAAAAGGGATGAAGACATTGACTCC
____________________________________________________________
consensus AGGTGAGAAGAGGAAGAAATCAAAAAGCTTGAAGGGAAAAGGGATGAAGACATTGACTCC
. : . : . : . : . : . :
rJMSF047P05+ TAATAGAAGCACTCCGAAACAGCAGGCTGATAAGGGAAAGAATGCCAAAGGCAACACAGG
rJMFF011D13+ TAATAGAAGCACTCCGAAACAGCAGGCTGATAAGGGAAAGAATGCCAAAGGCAACACAGG
rJMSF042I21+ TAATAGAAGCACTCCGAAACAGCAGGCTGATAAGGGAAAGAATGCCAAAGGCAACACAGG
____________________________________________________________
consensus TAATAGAAGCACTCCGAAACAGCAGGCTGATAAGGGAAAGAATGCCAAAGGCAACACAGG
. : . : . : . : . : . :
rJMSF047P05+ TGAAAATTCACAAGATGGTTTGCGAATTCAAAATGGTGCTCGTCTCGCAGCTGAGTCAAG
rJMFF011D13+ TGAAAATTCACAAGATGGTTTGCGAATTCAAAATGGTGCTCGTCTCGCAGCTGAGTCAAG
rJMSF042I21+ TGAAAATTCACAAGATGGTTTGCGAATTCAAAATGGTGCTCGTCTCGCAGCTGAGTCAAG
____________________________________________________________
consensus TGAAAATTCACAAGATGGTTTGCGAATTCAAAATGGTGCTCGTCTCGCAGCTGAGTCAAG
. : . : . : . : . : . :
rJMSF047P05+ TAAGAAAGGTGTTGTGAGTAACACAAGGAGACAATCTGGGAGGATTGCCAAAGACTATGG
rJMFF011D13+ TAAGAAAGGTGTTGTGAGTAACACAAGGAGACAATCTGGGAGGATTGCCAAAGACTATGG
rJMSF042I21+ TAAGAAAGGTGTTGTGAGTAACACAAGGAGACAATCTGGGAGGATTGCCAAAGACTATGG
____________________________________________________________
consensus TAAGAAAGGTGTTGTGAGTAACACAAGGAGACAATCTGGGAGGATTGCCAAAGACTATGG
. : . : . : . : . : . :
rJMSF047P05+ GAAGTTGGATCTGAATGTGGAGTTTAGTAATGAGGTTGAAGAACATCCACCTGGGATGGA
rJMFF011D13+ GAAGTTGGATCTGAATGTGGAGTTTAGTAATGAGGTTGAAGAACATCCACCTGGGATGGA
rJMSF042I21+ GAAGTTGGATCTGAATGTGGAGTTTAGTAATGAGGTTGAAGAACATCCACCTGGGATGGA
____________________________________________________________
consensus GAAGTTGGATCTGAATGTGGAGTTTAGTAATGAGGTTGAAGAACATCCACCTGGGATGGA
. : . : . : . : . : . :
rJMSF047P05+ TGGGCAAGGAAACGGAGCAGGAAGGGGAGAGGATGATAACATTGAAGGCATTGGATTTTT
rJMFF011D13+ TGGGCAAGGAAACGGAGCAGGAAGGGGAGAGGATGATAACATTGAAGGCATTGGATTTTT
rJMSF042I21+ TGGGCAAGGAAACGGAGCAGGAAGGGGAGAGGATGATAACATTGAAGGCATTGGATTTTT
____________________________________________________________
consensus TGGGCAAGGAAACGGAGCAGGAAGGGGAGAGGATGATAACATTGAAGGCATTGGATTTTT
. : . : . : . : . : . :
rJMSF047P05+ TGAGGGTCTTGATGAATTCCTAAGCAGTCTTCCTATACTCAATGTTGTTGGTGAGGATAA
rJMFF011D13+ TGAGGGTCTTGATGAATTCCTAAGCAGTCTTCCTATACTCAATGTTGTTGGTGAGGATAA
rJMSF042I21+ TGAGGGTCTTGATGAATTCCTAAGCAGTCTTCCTATACTCAATGTTGTTGGTGAGGATAA
____________________________________________________________
consensus TGAGGGTCTTGATGAATTCCTAAGCAGTCTTCCTATACTCAATGTTGTTGGTGAGGATAA
. : . : . : . : . : . :
rJMSF047P05+ GGTTAAGGCTGCTTAGTGAA
rJMFF011D13+ GGTTAAGGCTGCTTAGTGA
rJMSF042I21+ GGTTAAGGCTGCTTAGTGAACTATTGGCATTTCTATTGTTGTAGTTGTAACTCTAGCCTT
____________________________________________________________
consensus GGTTAAGGCTGCTTAGTGAACTATTGGCATTTCTATTGTTGTAGTTGTAACTCTAGCCTT
. : . : . : . : . : . :
rJMSF042I21+ GATTTTACATCTTTATGTTTGTAGTATGGAACCAGGTAGAGTTTCCTTGACACTGGACTT
____________________________________________________________
consensus GATTTTACATCTTTATGTTTGTAGTATGGAACCAGGTAGAGTTTCCTTGACACTGGACTT
. : . : . : . : . : . :
rJMSF042I21+ GATGTATCTTCCTGTAGCTTTTCTGCTGCACAGTTTGCAGCCAATTGTGTCTTTTTCATT
____________________________________________________________
consensus GATGTATCTTCCTGTAGCTTTTCTGCTGCACAGTTTGCAGCCAATTGTGTCTTTTTCATT