Contig 002935:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF037F20Sequence694021130700002935 (2)ref|XP_010327495.1|4e-38PREDICTED: probable protein phosphatase 2C 10 isoform X1 [Solanum lycopersicum]
JMSF042O08Sequence139023268748002935 (2)ref|XP_010327495.1|1e-91PREDICTED: probable protein phosphatase 2C 10 isoform X1 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF042O08+                                                               TCACAGG
                      ____________________________________________________________
consensus                                                                  TCACAGG
 
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rJMSF042O08+          TCGATCTTAAAAGCTTACGAGAAAACAGACCAGGCGATTCTCTCACACAACCCTGATATA
                      ____________________________________________________________
consensus             TCGATCTTAAAAGCTTACGAGAAAACAGACCAGGCGATTCTCTCACACAACCCTGATATA
 
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rJMSF042O08+          GGCACCGGGGGATCCACCGCTGTCACCGCGATTCTTGTAAATGGTCAGAAGCTGTGGGTG
                      ____________________________________________________________
consensus             GGCACCGGGGGATCCACCGCTGTCACCGCGATTCTTGTAAATGGTCAGAAGCTGTGGGTG
 
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rJMSF042O08+          GCTAACGTTGGGGACTCACGAGCTGTCCTTTCGAGGAAAGGGGTAGCGGTGCAGATGTCA
                      ____________________________________________________________
consensus             GCTAACGTTGGGGACTCACGAGCTGTCCTTTCGAGGAAAGGGGTAGCGGTGCAGATGTCA
 
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rJMSF042O08+          GTTGATCACGACCCCAATGCTGAGCACGAGAGCATTGAAGATCGGGGCGGTTTTGTCACA
                      ____________________________________________________________
consensus             GTTGATCACGACCCCAATGCTGAGCACGAGAGCATTGAAGATCGGGGCGGTTTTGTCACA
 
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rJMSF042O08+          AACATTCCAGGAGATGTTCCAAGAGTGAATGGTCAGCTAGCTGTTTCTCGCGCTTTTGGA
rJMSF037F20+                  AGGAGATGTTCCAAGAGTGAATGGTCAGCTAGCTGTTTCTCGCGCTTTTGGA
                      ____________________________________________________________
consensus             AACATTCCAGGAGATGTTCCAAGAGTGAATGGTCAGCTAGCTGTTTCTCGCGCTTTTGGA
 
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rJMSF042O08+          GACAAAAATCTGAAGAAATTCCTGCGATCTGATCCCGATGTTACTACTGCTGACATTGAT
rJMSF037F20+          GACAAAAATCTGAAGAAATTCCTGCGATCTGATCCCGATGTTACTACTGCTGACATTGAT
                      ____________________________________________________________
consensus             GACAAAAATCTGAAGAAATTCCTGCGATCTGATCCCGATGTTACTACTGCTGACATTGAT
 
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rJMSF042O08+          GGTGACGTTGATCTTCTCATCATTGCAAGCGACGGCCTATGGAAGGTGATGTCTAATCAA
rJMSF037F20+          GGTGACGTTGATCTTCTCATCATTGCAAGCGACGGCCTATGGAAGGTGATGTCTAATCAA
                      ____________________________________________________________
consensus             GGTGACGTTGATCTTCTCATCATTGCAAGCGACGGCCTATGGAAGGTGATGTCTAATCAA
 
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rJMSF042O08+          GAAGCAGTGGATATTGCTAAGAAGGCCAAGAATCCACAGAAAGCAGCCAAGAAATTGGCC
rJMSF037F20+          GAAGCAGTGGATATTGCTAAGAAGGCCAAGAATCCACAGAAAGCAGCCAAGAAATTGGCC
                      ____________________________________________________________
consensus             GAAGCAGTGGATATTGCTAAGAAGGCCAAGAATCCACAGAAAGCAGCCAAGAAATTGGCC
 
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rJMSF042O08+          ATGGAGGCGTTAAACAGAGAAAGTAAAGACGATATTTCTTGCATCGTTGTCCGGTTTAAA
rJMSF037F20+          ATGGAGGCGTTAAACAGAGAAAGTAAAGACGATATTTCTTGCATCGTTGTCCGGTTTAAA
                      ____________________________________________________________
consensus             ATGGAGGCGTTAAACAGAGAAAGTAAAGACGATATTTCTTGCATCGTTGTCCGGTTTAAA
 
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rJMSF042O08+          GAGTAAAAGCAGTATATATATAGAACAGGAGGGGACCTGATTTTGTGGACATGAAAAGAA
rJMSF037F20+          GAGTAAAAGCAGTATATATATAGAACAGGAGGGGACCTGATTTTGTGGACATGAAAAGAA
                      ____________________________________________________________
consensus             GAGTAAAAGCAGTATATATATAGAACAGGAGGGGACCTGATTTTGTGGACATGAAAAGAA
 
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rJMSF042O08+          TTCTGCAGAAGTTCATTATGCAGAGATTATTGGTGCCCCTTTCCTTCATTCTGTAGATTA
rJMSF037F20+          TTCTGCAGAAGTTCATTATGCAGAGATTATTGGTGCCCCTTTCCTTCATTCTGTAGATTA
                      ____________________________________________________________
consensus             TTCTGCAGAAGTTCATTATGCAGAGATTATTGGTGCCCCTTTCCTTCATTCTGTAGATTA
 
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rJMSF042O08+          TTTAATGATTTTCTGTAATCTTCCTGGAAATCTTGGGGGCATAGCTTCATATCATGTTGG
rJMSF037F20+          TTTAATGATTTTCTGTAATCTTCCTGGAAATCTTGGGGGCATAGCTTCATATCATGTTGG
                      ____________________________________________________________
consensus             TTTAATGATTTTCTGTAATCTTCCTGGAAATCTTGGGGGCATAGCTTCATATCATGTTGG
 
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rJMSF042O08+          AAACTTAC                                                    
rJMSF037F20+          AAACTTACATGGAGAAGCTCCTCATGCTTTCCAGTAAAATGCAATAATACAGACATTATT
                      ____________________________________________________________
consensus             AAACTTACATGGAGAAGCTCCTCATGCTTTCCAGTAAAATGCAATAATACAGACATTATT