Contig 002931:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034C02Sequence701005207 (3)ref|XP_009591658.1|7e-60PREDICTED: U-box domain-containing protein 35-like isoform X1 [Nicotiana toment700002931 (2)ref|XP_009591661.1|3e-35PREDICTED: U-box domain-containing protein 35-like isoform X4 [Nicotiana toment
JMSF036K18Sequence693005207 (3)ref|XP_009591658.1|2e-57PREDICTED: U-box domain-containing protein 35-like isoform X1 [Nicotiana toment654002931 (2)ref|XP_009591661.1|5e-26PREDICTED: U-box domain-containing protein 35-like isoform X4 [Nicotiana toment

Alignment

This contig is upended


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rJMSF034C02+                          GAGTAATGTTACTTCAATTATCACAGCAAGGCCCCCAATGGGTT
                      ____________________________________________________________
consensus                             GAGTAATGTTACTTCAATTATCACAGCAAGGCCCCCAATGGGTT
 
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rJMSF034C02+          TAACCCACCAAGTAGAGAAGGCTATAGAAAAGGGTACATTTGCAGAATTGTTAGATCCAA
rJMSF036K18+                ACCAAGTAGAGAAGGCTATAGAAAAGGGTACATTTGCAGAATTGTTAGATCCAA
                      ____________________________________________________________
consensus             TAACCCACCAAGTAGAGAAGGCTATAGAAAAGGGTACATTTGCAGAATTGTTAGATCCAA
 
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rJMSF034C02+          CGGTGCAAGACTGGCCAATGGAAGAAACTCTTAACTTTGCAAAACTATCACTCCGCTGTG
rJMSF036K18+          CGGTGCAAGACTGGCCAATGGAAGAAACTCTTAACTTTGCAAAACTATCACTCCGCTGTG
                      ____________________________________________________________
consensus             CGGTGCAAGACTGGCCAATGGAAGAAACTCTTAACTTTGCAAAACTATCACTCCGCTGTG
 
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rJMSF034C02+          CTGAGCTCAGGAAGAGGGATAGGCCAGAGCTTAGTTCAGTAGTCTTACCGGAGCTTAACC
rJMSF036K18+          CTGAGCTCAGGAAGAGGGATAGGCCAGAGCTTAGTTCAGTAGTCTTACCGGAGCTTAACC
                      ____________________________________________________________
consensus             CTGAGCTCAGGAAGAGGGATAGGCCAGAGCTTAGTTCAGTAGTCTTACCGGAGCTTAACC
 
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rJMSF034C02+          GGCTAAAAGAACTTGGGATGGAAAGCATGCAAAAGAAATACTGGTCATAATCCTGGACCT
rJMSF036K18+          GGCTAAAAGAACTTGGGATGGAAAGCATGCAAAAGAAATACTGGTCATAATCCTGGACCT
                      ____________________________________________________________
consensus             GGCTAAAAGAACTTGGGATGGAAAGCATGCAAAAGAAATACTGGTCATAATCCTGGACCT
 
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rJMSF034C02+          TGCTGTTGAATTATCCTGCATTTGGCATTTGCTTCTCAAATGGAACGATCCTAAATTTTC
rJMSF036K18+          TGCTGTTGAATTATCCTGCATTTGGCATTTGCTTCTCAAATGGAACGATCCTAAATTTTC
                      ____________________________________________________________
consensus             TGCTGTTGAATTATCCTGCATTTGGCATTTGCTTCTCAAATGGAACGATCCTAAATTTTC
 
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rJMSF034C02+          TGCCAGGCACATTTACTGGAGAATGATATGAAGAAATTAAGATACCTTTCCAAAAACAAG
rJMSF036K18+          TGCCAGGCACATTTACTGGAGAATGATATGAAGAAATTAAGATACCTTTCCAAAAACAAG
                      ____________________________________________________________
consensus             TGCCAGGCACATTTACTGGAGAATGATATGAAGAAATTAAGATACCTTTCCAAAAACAAG
 
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rJMSF034C02+          GAAGCAAACAGCAGTAACAATTGAAGAGCAGTTTCTGGGAAACCAGGACTTGGGAGGATG
rJMSF036K18+          GAAGCAAACAGCAGTAACAATTGAAGAGCAGTTTCTGGGAAACCAGGACTTGGGAGGATG
                      ____________________________________________________________
consensus             GAAGCAAACAGCAGTAACAATTGAAGAGCAGTTTCTGGGAAACCAGGACTTGGGAGGATG
 
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rJMSF034C02+          GTTGCTCATCAGGAGTTGCTTCATAGGCACCCTTACTTCCTGACAAGAAGATAATTTGTG
rJMSF036K18+          GTTGCTCATCAGGAGTTGCTTCATAGGCACCCTTACTTCCTGACAAGAAGATAATTTGTG
                      ____________________________________________________________
consensus             GTTGCTCATCAGGAGTTGCTTCATAGGCACCCTTACTTCCTGACAAGAAGATAATTTGTG
 
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rJMSF034C02+          TAGACTTGAATAGAATCTGAGAACTTCTTTGTGTTCAGATCTGTTACGAAAGTAAAGAGA
rJMSF036K18+          TAGACTTGAATAGAATCTGAGAACTTCTTTGTGTTCAGATCTGTTACGAAAGTAAAGAGA
                      ____________________________________________________________
consensus             TAGACTTGAATAGAATCTGAGAACTTCTTTGTGTTCAGATCTGTTACGAAAGTAAAGAGA
 
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rJMSF034C02+          ATATTTCTTAATATGCTGTTGTCTTATAGAAAAGAGAATACAAAGCCCTATAAATAGGTG
rJMSF036K18+          ATATTTCTTAATATGCTGTTGTCTTATAGAAAAGAGAATACAAAGCCCTATAAATAGGTG
                      ____________________________________________________________
consensus             ATATTTCTTAATATGCTGTTGTCTTATAGAAAAGAGAATACAAAGCCCTATAAATAGGTG
 
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rJMSF034C02+          CTAGAAGACGGAAACAAGTTTCCATATGCCTACTTACCTAAATCCCTAAGACTGCC    
rJMSF036K18+          CTAGAAGACGGAAACAAGTTTCCATATGCCTACTTACCTAAATCCCTAAGACTGCCTAAT
                      ____________________________________________________________
consensus             CTAGAAGACGGAAACAAGTTTCCATATGCCTACTTACCTAAATCCCTAAGACTGCCTAAT