Contig 002917:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF033I14Sequence644002917 (4)ref|XP_006347901.1|265PREDICTED: uncharacterized protein LOC102580285 [Solanum tuberosum]680002917 (4)ref|XP_006347901.1|259PREDICTED: uncharacterized protein LOC102580285 [Solanum tuberosum]
JMSF050L07Sequence645002917 (4)ref|XP_006347901.1|266PREDICTED: uncharacterized protein LOC102580285 [Solanum tuberosum]791002917 (4)ref|XP_006347901.1|273PREDICTED: uncharacterized protein LOC102580285 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF033I14- GGGAAGTCATAACGTGGAGCATATCCATTCTCGG
JMSF050L07- GGGAAGTCATAACGTGGAGCATATCCATTCTCGG
                      ____________________________________________________________
consensus GGGAAGTCATAACGTGGAGCATATCCATTCTCGG
 
. : . : . : . : . : . :
JMSF033I14- AGGAGCAAATGGGAACGGCGAAGCAGCTAGTATCCGTAGGCCTATCGCTGCCAATTCCGC
JMSF050L07- AGGAGCAAATGGGAACGGCGAAGCAGCTAGTATCCGTAGGCCTATCGCTGCCAATTCCGC
                      ____________________________________________________________
consensus AGGAGCAAATGGGAACGGCGAAGCAGCTAGTATCCGTAGGCCTATCGCTGCCAATTCCGC
 
. : . : . : . : . : . :
JMSF033I14- AGTCTCCGGTGGCCGGAAAACGCAACAGTCGCCTGAATTTTGTGCGGTTAACTTTACAAA
JMSF050L07- AGTCTCCGGTGGCCGGAAAACGCAACAGTCGCCTGAATTTTGTGCGGTTAACTTTACAAA
rJMSF050L07+ TTACAAA
                      ____________________________________________________________
consensus AGTCTCCGGTGGCCGGAAAACGCAACAGTCGCCTGAATTTTGTGCGGTTAACTTTACAAA
 
. : . : . : . : . : . :
JMSF033I14- GTACTGCAATCAGGGCGTCGCTGTCAATAGATGAAATTCCACCAAATGCCCTAAGGCAGG
JMSF050L07- GTACTGCAATCAGGGCGTCGCTGTCAATAGATGAAATTCCACCAAATGCCCTAAGGCAGG
rJMSF050L07+ GTACTGCCATCAGGGCGTCGCTGTCAATAGATGAAATTCCACCAAATGCCCTAAGGCAGG
                      ____________________________________________________________
consensus GTACTGCAATCAGGGCGTCGCTGTCAATAGATGAAATTCCACCAAATGCCCTAAGGCAGG
 
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JMSF033I14- CAAGAGAATCGGGCTTGAGCAGCTGTGGCTTCAGCCTTGGCGTCGACTTGGGATTAAGTC
JMSF050L07- CAAGAGAATCGGGCTTGAGCAGCTGTGGCTTCAGCCTTGGCGTCGACTTGGGATTAAGTC
rJMSF050L07+ CAAGAGANTCGGGCTTGAGCAGCTGTGGCTTCAGCCTTGGCGTCGACTTGGGATTAAGTC
rJMSF033I14+ CGTCGACTTGGGATTAAGTC
                      ____________________________________________________________
consensus CAAGAGAATCGGGCTTGAGCAGCTGTGGCTTCAGCCTTGGCGTCGACTTGGGATTAAGTC
 
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JMSF033I14- GCACTGGCCTTGCTCTTAGCAAAGGCTTCTCTTTTCGTCCATTAACGGTTCTGGAATTGA
JMSF050L07- GCACTGGCCTTGCTCTTAGCAAAGGCTTCTCTTTTCGTCCATTAACGGTTCTGGAATTGA
rJMSF050L07+ GCACTGGCCTTGCTCTTAGCAAAGGCTTCTCTTTTCGTCCATTAACGGTTCTGGAATTGA
rJMSF033I14+ GCACTGGCCTTGCTCTTAGCAAAGGCTTCTCTTTTCGTCCATTAACGGTTCTGGAATTGA
                      ____________________________________________________________
consensus GCACTGGCCTTGCTCTTAGCAAAGGCTTCTCTTTTCGTCCATTAACGGTTCTGGAATTGA
 
. : . : . : . : . : . :
JMSF033I14- GAGGGCAGAAGCTAGAAGTTCGACTTATTGATATTGCTCAAAAACAGGAGGTTGATGAAT
JMSF050L07- GAGGGCAGAAGCTAGAAGTTCGACTTATTGATATTGCTCAAAAACAGGAGGTTGATGAAT
rJMSF050L07+ GAGGGCAGAAGCTAGAAGTTCGACTTATTGATATTGCTCAAAAACAGGAGGTTGATGAAT
rJMSF033I14+ GAGGGCAGAAGCTAGAAGTTCGACTTATTGATATTGCTCAAAAACAGGAGGTTGATGAAT
                      ____________________________________________________________
consensus GAGGGCAGAAGCTAGAAGTTCGACTTATTGATATTGCTCAAAAACAGGAGGTTGATGAAT
 
. : . : . : . : . : . :
JMSF033I14- TTATAATTGGGCTTCCATTATCTAGTGATGGGAATGAGACTCCACAATCAAATAAAGTTC
JMSF050L07- TTATAATTGGGCTTCCATTATCTAGTGATGGGAATGAGACTCCACAATCAAATAAAGTTC
rJMSF050L07+ TTATAATTGGGCTTCCATTATCTAGTGATGGGAATGAGACTCCACAATCAAATAAAGTTC
rJMSF033I14+ TTATAATTGGGCTTCCATTATCTAGTGATGGGAATGAGACTCCACAATCAAATAAAGTTC
                      ____________________________________________________________
consensus TTATAATTGGGCTTCCATTATCTAGTGATGGGAATGAGACTCCACAATCAAATAAAGTTC
 
. : . : . : . : . : . :
JMSF033I14- GAAGCGTTGCAGGTAGACTAGCAGTTCGAGCTGCTGAGAAGGGCTGGAGAGTATACCTGC
JMSF050L07- GAAGCGTTGCAGGTAGACTAGCAGTTCGAGCTGCTGAGAAGGGCTGGAGAGTATACCTGC
rJMSF050L07+ GAAGCGTTGCAGGTAGACTAGCAGTTCGAGCTGCTGAGAAGGGCTGGAGAGTATACCTGC
rJMSF033I14+ GAAGCGTTGCAGGTAGACTAGCAGTTCGAGCTGCTGAGAAGGGCTGGAGAGTATACCTGC
                      ____________________________________________________________
consensus GAAGCGTTGCAGGTAGACTAGCAGTTCGAGCTGCTGAGAAGGGCTGGAGAGTATACCTGC
 
. : . : . : . : . : . :
JMSF033I14- AGGAAGAGTATGGGACATCAACTCAGGCCATGAGCCGCATGATTGATATGGGCCTCAGCA
JMSF050L07- AGGAAGAGTATGGGACATCAACTCAGGCCATGAGCCGCATGATTGATATGGGCCTCAGCA
rJMSF050L07+ AGGAAGAGTATGGGACATCAACTCAGGCCATGAGCCGCATGATTGATATGGGCCTCAGCA
rJMSF033I14+ AGGAAGAGTATGGGACATCAACTCAGGCCATGAGCCGCATGATTGATATGGGCCTCAGCA
                      ____________________________________________________________
consensus AGGAAGAGTATGGGACATCAACTCAGGCCATGAGCCGCATGATTGATATGGGCCTCAGCA
 
. : . : . : . : . : . :
JMSF033I14- AATCTGCTCGTCAAGGGAAACTTGATGCCTATGCAGCTGTGATGGTGCTTGAGAGATATT
JMSF050L07- AATCTGCTCGTCAAGGGAAACTTGATGCCTATGCAGCTGTGATGGTGCTTGAGAGATATT
rJMSF050L07+ AATCTGCTCGTCAAGGGAAACTTGATGCCTATGCAGCTGTGATGGTGCTTGAGAGATATT
rJMSF033I14+ AATCTGCTCGTCAAGGGAAACTTGATGCCTATGCAGCTGTGATGGTGCTTGAGAGATATT
                      ____________________________________________________________
consensus AATCTGCTCGTCAAGGGAAACTTGATGCCTATGCAGCTGTGATGGTGCTTGAGAGATATT
 
. : . : . : . : . : . :
JMSF033I14- TCTCAGCCTC
JMSF050L07- TCTCAGCCTC
rJMSF050L07+ TCTCAGCCTCAGGTGAGGGGATAGAACTTGTTTTACCCAAACAATTGGAACTCCAAAACA
rJMSF033I14+ TCTCAGCCTCAGGTGAGGGGATAGAACTTGTTTTACCCAAACAATTGGAACTCCAAAACA
                      ____________________________________________________________
consensus TCTCAGCCTCAGGTGAGGGGATAGAACTTGTTTTACCCAAACAATTGGAACTCCAAAACA
 
. : . : . : . : . : . :
rJMSF050L07+ AGCTCAGAAAGGCATCTTCCATGGAAGATGAATTTGATAGTTGACACATGTACACAACCA
rJMSF033I14+ AGCTCAGAAAGGCATCTTCCATGGAAGATGAATTTGATAGTTGACACATGTACACAACCA
                      ____________________________________________________________
consensus AGCTCAGAAAGGCATCTTCCATGGAAGATGAATTTGATAGTTGACACATGTACACAACCA
 
. : . : . : . : . : . :
rJMSF050L07+ TATGAGTTCATGAGTGGTAGAGCTATGAGATCCTTAATGCCAAACCTAACTGCAGTGCTA
rJMSF033I14+ TATGAGTTCATGAGTGGTAGAGCTATGAGATCCTTAATGCCAAACCTAACTGCAGTGCTA
                      ____________________________________________________________
consensus TATGAGTTCATGAGTGGTAGAGCTATGAGATCCTTAATGCCAAACCTAACTGCAGTGCTA
 
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rJMSF050L07+ ATCATGGCTCAACTATGAGTGCATAGCCTATTAGGACGGGACAAAGAGAAAAAAACTTTG
rJMSF033I14+ ATCATGGCTCAACTATGAGTGCATAGCCTATTAGGACGGGACAAAGAGAAAAAAACTTTG
                      ____________________________________________________________
consensus ATCATGGCTCAACTATGAGTGCATAGCCTATTAGGACGGGACAAAGAGAAAAAAACTTTG
 
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rJMSF050L07+ ATTTATATATATACATTTTATTCTCTTCTTTTCTAGTCTTTTGTTTATTAATTTTGGAAT
rJMSF033I14+ ATTTATATATATACATTTTATTCTCTTCTTTTCTAGTCTTTTGTTTATTAATTTTGGAAT
                      ____________________________________________________________
consensus ATTTATATATATACATTTTATTCTCTTCTTTTCTAGTCTTTTGTTTATTAATTTTGGAAT