Contig 002902:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015P20Sequence306002902 (2)dbj|BAL04590.1|2e-13leucine-rich repeat receptor-like kinase [Lotus japonicus]
JMSF030P11Sequence754002902 (2)ref|XP_009360515.1|7e-119PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Pyrus x bret

Alignment

This contig is upended


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rJMSF030P11+                                    GGATTGGAGAATACTTCACAAGATAGCTCTCGAC
                      ____________________________________________________________
consensus                                       GGATTGGAGAATACTTCACAAGATAGCTCTCGAC
 
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rJMSF030P11+          ATAGCCCGGGCACTTGCTTATCTACACGATCAATGCGTGCCTCGTGTGCTTCACCGTGAT
                      ____________________________________________________________
consensus             ATAGCCCGGGCACTTGCTTATCTACACGATCAATGCGTGCCTCGTGTGCTTCACCGTGAT
 
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rJMSF030P11+          GTAAAACCGAGCAATATACTGTTAGATGAGGCCTACAATGCATATCTATCCGACTTTGGA
                      ____________________________________________________________
consensus             GTAAAACCGAGCAATATACTGTTAGATGAGGCCTACAATGCATATCTATCCGACTTTGGA
 
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rJMSF030P11+          TTGGCCCGACTTCTCGGGACTTCAGAGACACATGCCACCACGGGTCCCGCTGGAACATTT
                      ____________________________________________________________
consensus             TTGGCCCGACTTCTCGGGACTTCAGAGACACATGCCACCACGGGTCCCGCTGGAACATTT
 
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rJMSF030P11+          GGATATGTTGCTCCCGAATATGCAATGACTTGCCGTGTCTCTGACAAGGCCGATGTCTAC
                      ____________________________________________________________
consensus             GGATATGTTGCTCCCGAATATGCAATGACTTGCCGTGTCTCTGACAAGGCCGATGTCTAC
 
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rJMSF030P11+          AGCTATGGCATCGTGTTGCTCGAGCTAATCTCCGACAAGAAGGCGCTCGATCCCTCGTTC
                      ____________________________________________________________
consensus             AGCTATGGCATCGTGTTGCTCGAGCTAATCTCCGACAAGAAGGCGCTCGATCCCTCGTTC
 
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rJMSF030P11+          TCGAGCTATGGGCACGGCTTCAACATCGTCTCGTGGGCCTCCATGCTCTTAAGGCAAGGT
                      ____________________________________________________________
consensus             TCGAGCTATGGGCACGGCTTCAACATCGTCTCGTGGGCCTCCATGCTCTTAAGGCAAGGT
 
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rJMSF015P20+                                                           ACGACTTGGNG
rJMSF030P11+          CGCGCCAAGGAGTTCTTCACCGCCGGGCTTTGGGATTCGGGCCCTCACGACGACTTGGTG
                      ____________________________________________________________
consensus             CGCGCCAAGGAGTTCTTCACCGCCGGGCTTTGGGATTCGGGCCCTCACGACGACTTGGTG
 
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rJMSF015P20+          GAGCTGTTACACTTNGCGGTNATATGCACAGTCGAGACCCTNTCCACCAGGCCTTCGATG
rJMSF030P11+          GAGCTGTTACACTTCGCGGTTATATGCACAGTCGAGACCCTCTCCACCAGGCCTTCGATG
                      ____________________________________________________________
consensus             GAGCTGTTACACTTCGCGGTTATATGCACAGTCGAGACCCTCTCCACCAGGCCTTCGATG
 
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rJMSF015P20+          AAACAAGTTGTGAGAAGATTAAGGCAACTTCAACCCCCTTCTTGTTAGCAGCTCGGGCAA
rJMSF030P11+          AAACAAGTTGTGAGAAGATTAAGGCAACTTCAACCCCCTTCTTGTTAGCAGCTCGGGCAA
                      ____________________________________________________________
consensus             AAACAAGTTGTGAGAAGATTAAGGCAACTTCAACCCCCTTCTTGTTAGCAGCTCGGGCAA
 
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rJMSF015P20+          CATTNCGNGATTCATAGGAAAGGTATATCGNTAAATCCCACTTGTAATTNATAACCCNNG
rJMSF030P11+          CATTGCGAGATTCATAGGAAAGGTATATCGCTAAATCCCACTTGTAATTTATAACCCTTG
                      ____________________________________________________________
consensus             CATTGCGAGATTCATAGGAAAGGTATATCGCTAAATCCCACTTGTAATTTATAACCCTTG
 
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rJMSF015P20+          CAGTTTGTAGGGAAGAGAGTCCGGGTTTGAGTTTTTA                       
rJMSF030P11+          CAGTTTGTAGGGAAGAGAGTCCGGGTTTGAGTTTTTAGCGATTGTTGTACATTGTAGTAT
                      ____________________________________________________________
consensus             CAGTTTGTAGGGAAGAGAGTCCGGGTTTGAGTTTTTAGCGATTGTTGTACATTGTAGTAT
 
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rJMSF030P11+          AGCTTTGCCCCCATTCTTTTTCCATGTTCTGTGCCTTGTAGGGGGTTCACCAATGCATCT
                      ____________________________________________________________
consensus             AGCTTTGCCCCCATTCTTTTTCCATGTTCTGTGCCTTGTAGGGGGTTCACCAATGCATCT