Contig 002892:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009G24Sequence580010170 (2)ref|XP_009775110.1|5e-37PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like isoform X2 [Nicot721002892 (2)ref|XP_009610649.1|5e-93PREDICTED: uroporphyrinogen decarboxylase, chloroplastic [Nicotiana tomentosifo
JMSF028O11Sequence626010170 (2)ref|XP_009775109.1|7e-70PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like isoform X1 [Nicot725002892 (2)ref|XP_009610649.1|3e-105PREDICTED: uroporphyrinogen decarboxylase, chloroplastic [Nicotiana tomentosifo

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF009G24+ AAA
                      ____________________________________________________________
consensus AAA
 
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rJMFF009G24+ TAAAAAAGCTAGCTTTCTCACAGCCCAAGGTCCTTCACGCACTTCTTCAAAAATTTGCAA
rJMSF028O11+ TTGCAA
                      ____________________________________________________________
consensus TAAAAAAGCTAGCTTTCTCACAGCCCAAGGTCCTTCACGCACTTCTTCAAAAATTTGCAA
 
. : . : . : . : . : . :
rJMFF009G24+ CCTCTATGGCTAAATATATACGATACCAAGCTGACAACGGAGCTCCAGGTGGTTCAGATA
rJMSF028O11+ CCTCTATGGCTAAATATATACGATACCAAGCTGACAACGGAGCT-CAGGTGGTTCAGATA
                      ____________________________________________________________
consensus CCTCTATGGCTAAATATATACGATACCAAGCTGACAACGGAGCTCCAGGTGGTTCAGATA
 
. : . : . : . : . : . :
rJMFF009G24+ TTTGATTCGTGGGCCACTGAACTTAGCCCCGTGGATTTTGAAGAGTTCAGTCTCCCTTAC
rJMSF028O11+ TTTGATTCGTGGGCCACTGAACTTAGCCCCGTGGATTTTGAAGAGTTCAGTCTCCCTTAC
                      ____________________________________________________________
consensus TTTGATTCGTGGGCCACTGAACTTAGCCCCGTGGATTTTGAAGAGTTCAGTCTCCCTTAC
 
. : . : . : . : . : . :
rJMFF009G24+ TTGAAGCAGATTGTAGATTCGGTTAAACAAACTCATCCAGATTTACCGCTGATCCTATAT
rJMSF028O11+ TTGAAGCAGATTGTAGATTCGGTTAAACAAACTCATCCAGATTTACCGCTGATCCTATAT
                      ____________________________________________________________
consensus TTGAAGCAGATTGTAGATTCGGTTAAACAAACTCATCCAGATTTACCGCTGATCCTATAT
 
. : . : . : . : . : . :
rJMFF009G24+ GCCAGCGGATCAGGGGGTTTGCTCGAGAGACTACCGGCGACAGGAGTTGATGTCGTGAGC
rJMSF028O11+ GCCAGCGGATCAGGGGGTTTGCTCGAGAGACTACCGGCGACAGGAGTTGATGTCGTGAGC
                      ____________________________________________________________
consensus GCCAGCGGATCAGGGGGTTTGCTCGAGAGACTACCGGCGACAGGAGTTGATGTCGTGAGC
 
. : . : . : . : . : . :
rJMFF009G24+ TTGGATTGGACCGTGGATATGGCTGATGGTAGGAGAAGATTGGGTCCTGATGTGGCGGTG
rJMSF028O11+ TTGGATTGGACCGTGGATATGGCTGATGGTAGGAGAAGATTGGGTCCTGATGTGGCGGTG
                      ____________________________________________________________
consensus TTGGATTGGACCGTGGATATGGCTGATGGTAGGAGAAGATTGGGTCCTGATGTGGCGGTG
 
. : . : . : . : . : . :
rJMFF009G24+ CAGGGCAACGTGGATCCTGGCGTTCTTTTTGGCTCCAAGGAATTCATCACCAATCGCATA
rJMSF028O11+ CAGGGCAACGTGGATCCTGGCGTTCTTTTTGGCTCCAAGGAATTCATCACCAATCGCATA
                      ____________________________________________________________
consensus CAGGGCAACGTGGATCCTGGCGTTCTTTTTGGCTCCAAGGAATTCATCACCAATCGCATA
 
. : . : . : . : . : . :
rJMFF009G24+ AACGACACGGTTAGAAAAGCTGGTCGAGGAAAACATATTTTGAACCTTGGACATGGCATC
rJMSF028O11+ AACGACACGGTTAGAAAAGCTGGTCGAGGAAAACATATTTTGAACCTTGGACATGGCATC
                      ____________________________________________________________
consensus AACGACACGGTTAGAAAAGCTGGTCGAGGAAAACATATTTTGAACCTTGGACATGGCATC
 
. : . : . : . : . : . :
rJMFF009G24+ AAGGTAGGTACACCCGAGGAAAATGTTGCCCACTTTTTTGAGGTTGCCAAAGGACTTAGG
rJMSF028O11+ AAGGTAGGTACACCCGAGGAAAATGTTGCCCACTTTTTTGAGGTTGCCAAAGGACTTAGG
                      ____________________________________________________________
consensus AAGGTAGGTACACCCGAGGAAAATGTTGCCCACTTTTTTGAGGTTGCCAAAGGACTTAGG
 
. : . : . : . : . : . :
rJMFF009G24+ TATTAGAATGCAATCAGATGTTAAACTTATGTGATAGATTGTTGAGAAGTAGGTGCAACT
rJMSF028O11+ TATTAGAATGCAATCAGATGTTAAACTTATGTGATAGATTGTTGAGAAGTAGGTGCAACT
                      ____________________________________________________________
consensus TATTAGAATGCAATCAGATGTTAAACTTATGTGATAGATTGTTGAGAAGTAGGTGCAACT
 
. : . : . : . : . : . :
rJMFF009G24+ GTGCAAGAGAGTATTGTCACTGCCTTCAAAGGTTAGTACTCAGTAGATTAGCTTTTGAAG
rJMSF028O11+ GTGCAAGAGAGTATTGTCACTGCCTTCAAAGGTTAGTACTCAGTAGATTAGCTTTTGAAG
                      ____________________________________________________________
consensus GTGCAAGAGAGTATTGTCACTGCCTTCAAAGGTTAGTACTCAGTAGATTAGCTTTTGAAG
 
. : . : . : . : . : . :
rJMFF009G24+ TTTTTGTTAAACTATGAGCTTAATCCTCAGCATTGAACTATGGCCATGATTTTCATAT
rJMSF028O11+ TTTTTGTTAAACTATGAGCTTAATCCTCAGCATTGAACTATGGCCATGATTTTCATATTA
                      ____________________________________________________________
consensus TTTTTGTTAAACTATGAGCTTAATCCTCAGCATTGAACTATGGCCATGATTTTCATATTA
 
. : . : . : . : . : . :
rJMSF028O11+ TATTTTAAAATGTATTTATATATTTGGAGAAGAAAGGGTGTAAAATGTTATATATACACA
                      ____________________________________________________________
consensus TATTTTAAAATGTATTTATATATTTGGAGAAGAAAGGGTGTAAAATGTTATATATACACA