Contig 002876:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009H23Sequence272006413 (3)ref|XP_009786415.1|2e-06PREDICTED: E3 ubiquitin-protein ligase Hakai [Nicotiana sylvestris] ref|XP_00978774002876 (2)ref|XP_009786415.1|1e-54PREDICTED: E3 ubiquitin-protein ligase Hakai [Nicotiana sylvestris] ref|XP_00978
JMSF027E12Sequence635006413 (3)ref|XP_009786415.1|8e-91PREDICTED: E3 ubiquitin-protein ligase Hakai [Nicotiana sylvestris] ref|XP_00978788002876 (2)ref|XP_009786415.1|1e-50PREDICTED: E3 ubiquitin-protein ligase Hakai [Nicotiana sylvestris] ref|XP_00978

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF027E12+ TCCAGNATC
                      ____________________________________________________________
consensus TCCAGNATC
 
. : . : . : . : . : . :
rJMSF009H23+ CTCAGCAGACTTTTGAGACGCAGGGTGGGATGAGGCAAGAACCGGGCCAATTTC
rJMSF027E12+ AGTTTCCTCAGCAGACTTTTGAGACGCAGGGTCGGATGAGGCAAGAACCGGGCCAATTTC
                      ____________________________________________________________
consensus AGTTTCCTCAGCAGACTTTTGAGACGCAGGGTGGGATGAGGCAAGAACCGGGCCAATTTC
 
. : . : . : . : . : . :
rJMSF009H23+ AAGACAAGCAACAAGGAGTTGTTGGAGCATCTCCTTTTCCTGAATACCCTATTAATGTTC
rJMSF027E12+ AAGACAAGCAACAAGGAGTTGTTGGAGCATCTCCTTTTCCTGAATACCCTATTAATGTTC
                      ____________________________________________________________
consensus AAGACAAGCAACAAGGAGTTGTTGGAGCATCTCCTTTTCCTGAATACCCTATTAATGTTC
 
. : . : . : . : . : . :
rJMSF009H23+ CTCAACCTCATGGTTTTATGCCTGTTAATCCAAATCCAGTTTTGGCCCCCCCTCAATTTG
rJMSF027E12+ CTCAACCTCATGGCTTTATGCCTGTTAATCCAAATCCAGTTTTGGCCCCCCCTCAATTTG
                      ____________________________________________________________
consensus CTCAACCTCATGGTTTTATGCCTGTTAATCCAAATCCAGTTTTGGCCCCCCCTCAATTTG
 
. : . : . : . : . : . :
rJMSF009H23+ GTTACCCTCATTTTGTACCTGATGGAGCCCAACAATATTATGGCGCCCCGTATGATATGC
rJMSF027E12+ GTTACCCTCATTTTGTACCTGATGGAGCCCAACAATATTATGGCGCCCCGTATGATATGC
                      ____________________________________________________________
consensus GTTACCCTCATTTTGTACCTGATGGAGCCCAACAATATTATGGCGCCCCGTATGATATGC
 
. : . : . : . : . : . :
rJMSF009H23+ GAAGGCCAGACTCAGCAGCAGAAGTTGGATCCGAGCAAGGATCATTACTGGGTTTTCCAC
rJMSF027E12+ GAAGGCCAGACTCAGCAGCAGAAGTTGGATCCGAGCAAGGATCATTACTGGGTTTTCCAC
                      ____________________________________________________________
consensus GAAGGCCAGACTCAGCAGCAGAAGTTGGATCCGAGCAAGGATCATTACTGGGTTTTCCAC
 
. : . : . : . : . : . :
rJMSF009H23+ CTGGTCCTGCAGGGGCTGCAAATTTTGCAGAAGCTTACCCTCGGCCATGGAATATGGGGC
rJMSF027E12+ CTGGTCCTGCAGGGGCTGCAAATTTTGCAGAAGCTTACCCTCGGCCATGGAATATGGGGC
                      ____________________________________________________________
consensus CTGGTCCTGCAGGGGCTGCAAATTTTGCAGAAGCTTACCCTCGGCCATGGAATATGGGGC
 
. : . : . : . : . : . :
rJMSF009H23+ AGGCTGTTGGGCCTTTTGATTCTACTGCAGTTCATGGATTTATGGATGGTTTCATGAATG
rJMSF027E12+ AGGCTGTTGGGCCTTTTGATTCTACTGCAGTTCATGGATTTATGGATGGTTTCATGAATG
                      ____________________________________________________________
consensus AGGCTGTTGGGCCTTTTGATTCTACTGCAGTTCATGGATTTATGGATGGTTTCATGAATG
 
. : . : . : . : . : . :
rJMSF009H23+ CACCTGATCCTCAAGGAAGAAACGCATTCTTTCAAGGAAATTCTGCAGGATTGCCTCCAA
rJMSF027E12+ CACCTGATCCTCAAGGAAGAAACGCATTCTTTCAAGGAAATTCTGCAGGATTGCCTCCAA
                      ____________________________________________________________
consensus CACCTGATCCTCAAGGAAGAAACGCATTCTTTCAAGGAAATTCTGCAGGATTGCCTCCAA
 
. : . : . : . : . : . :
rJMSF009H23+ ATATGCCTCCTGCCTCTTCTTCGTCGGCCAACAAAGGATTAGAAACCGGACAGGGTGGAT
rJMSF027E12+ ATATGCCTCCTGCCTCTTCTTCGTCGGCCAACAAAGGATTAGAAACCGGACAGGGTGGAT
                      ____________________________________________________________
consensus ATATGCCTCCTGCCTCTTCTTCGTCGGCCAACAAAGGATTAGAAACCGGACAGGGTGGAT
 
. : . : . : . : . : . :
rJMSF009H23+ ATTCGGTGGATGGGAAGACTGTTCTGGCACCACAACCTATGCCTCTCCCTCCTCCTCCTC
rJMSF027E12+ ATTCGGTGGATGGGAAGACTGTTCTGGCACCACAACCTATGCCTCTCCCTCCTCCTCCTC
                      ____________________________________________________________
consensus ATTCGGTGGATGGGAAGACTGTTCTGGCACCACAACCTATGCCTCTCCCTCCTCCTCCTC
 
. : . : . : . : . : . :
rJMSF009H23+ CTTTGCCTCCCCATATGCACCAGCTCCAAAGAGGCAGATCCTATTCTGGTGATACAGAGT
rJMSF027E12+ CTTTGCCTCCCCATATGCACCAGCTCCAAAGAGGCAGATCCTATTCTGGTGATACAGAGT
                      ____________________________________________________________
consensus CTTTGCCTCCCCATATGCACCAGCTCCAAAGAGGCAGATCCTATTCTGGTGATACAGAGT
 
. : . : . : . : . : . :
rJMSF009H23+ CATGATACCAGGACTTAACAAGAGAAGCATGATAGCCAAAATTAGCCTTTCTGTTTACTG
rJMSF027E12+ CATGATACCAGGACTTAACAAGAGAAGCATGATAGCCAAAGTTAGCCTTTCTGTTTACTG
                      ____________________________________________________________
consensus CATGATACCAGGACTTAACAAGAGAAGCATGATAGCCAAAGTTAGCCTTTCTGTTTACTG
 
. : . : . : . : . : . :
rJMSF009H23+ TTTAATGTTTGTTTGTAACCTTTTTTTGCTTACCAGTTGTCCTTGTTGAATGTGTTTTGT
rJMSF027E12+ TTTAATGTTTGTTTGTAACCTTTTTTTGCTTA-CAGTTGTCCTTGTTGAATGTGTTTTGT
                      ____________________________________________________________
consensus TTTAATGTTTGTTTGTAACCTTTTTTTGCTTACCAGTTGTCCTTGTTGAATGTGTTTTGT