Contig 002860:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012N02Sequence244003684 (4)706002860 (4)ref|XP_006345419.1|4e-114PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum]
JMSF024I03Sequence677003684 (4)ref|XP_006345419.1|3e-92PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum]690002860 (4)ref|XP_006345419.1|3e-95PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum]
JMSF040I23Sequence611003684 (4)ref|XP_010324687.1|4e-75PREDICTED: alpha-N-acetylglucosaminidase isoform X1 [Solanum lycopersicum]844002860 (4)ref|XP_006345419.1|7e-126PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum]
JMSF052B19Sequence616003684 (4)ref|XP_006345419.1|7e-76PREDICTED: alpha-N-acetylglucosaminidase-like [Solanum tuberosum]881002860 (4)ref|XP_009611357.1|6e-149PREDICTED: LOW QUALITY PROTEIN: alpha-N-acetylglucosaminidase [Nicotiana toment

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF040I23+ CAG
rJMSF052B19+ GTCGAAGCTGCTTGGGAGATACTTTATCACACAG
                      ____________________________________________________________
consensus GTCGAAGCTGCTTGGGAGATACTTTATCACACAG
 
. : . : . : . : . : . :
rJMSF040I23+ TATACAATTGCACAGACGGAATTGCTGACCACAACAAAGACTACATAGTAGAATTTTCCC
rJMSF052B19+ TATACAATTGCACAGACGGAATTGCTGACCACAACAAAGACTACATAGTAGAA-TTTCCC
                      ____________________________________________________________
consensus TATACAATTGCACAGACGGAATTGCTGACCACAACAAAGACTACATAGTAGAATTTTCCC
 
. : . : . : . : . : . :
rJMSF040I23+ GACTGGGATCCATCCGATCCTACAGGATCTGATATGCCCGAAAATGATCATACAAAAGCA
rJMSF052B19+ GACTGGGATCCATCCGATCCTACAGGATCTGATATGCCCGAAAATGATCATACAAAAGCA
                      ____________________________________________________________
consensus GACTGGGATCCATCCGATCCTACAGGATCTGATATGCCCGAAAATGATCATACAAAAGCA
 
. : . : . : . : . : . :
rJMSF040I23+ TTTGTTTTGACACATCAGAGGAGAAGATTCTTTCTCCTAGAAACTAGCTCATCTTTGCCT
rJMSF052B19+ TTTGTTTTGACACATCAGAGGAGAAGATTCTTTCTCCTAGAAACTAGCTCATCTTTGCCT
rJMSF012N02+ T
                      ____________________________________________________________
consensus TTTGTTTTGACACATCAGAGGAGAAGATTCTTTCTCCTAGAAACTAGCTCATCTTTGCCT
 
. : . : . : . : . : . :
rJMSF040I23+ CAACCACACTTATGGTATTCCACCGAGGATGTCTTGAAGGCATTGAAACTATTCCTTGCT
rJMSF052B19+ CAACCACACTTATGGTATTCCACCGAGGATGTCTTGAAGGCATTGAAACTATTCCTTGCT
rJMSF012N02+ CAACCACACTTATGGTATTCCACCGAGGATGTCTTGAAGGCATTGAAACTATTCCTTGCT
                      ____________________________________________________________
consensus CAACCACACTTATGGTATTCCACCGAGGATGTCTTGAAGGCATTGAAACTATTCCTTGCT
 
. : . : . : . : . : . :
rJMSF040I23+ GCAGGAACTGAGCTTGCTGGAAGCCTCACTTACAGGTATGATTTGGTGGACTTAACCAGA
rJMSF052B19+ GCAGGAACTGAGCTTGCTGGAAGCCTCACTTACAGGTATGATTTGGTGGACTTAACCAGA
rJMSF012N02+ GCAGGAACTGAGCTTGCTGGAAGCCTCACTTACAGGTATGATTTGGTGGACTTAACCAGA
rJMSF024I03+ TACAGGTATGATTTGGTGGACTTAACCAGA
                      ____________________________________________________________
consensus GCAGGAACTGAGCTTGCTGGAAGCCTCACTTACAGGTATGATTTGGTGGACTTAACCAGA
 
. : . : . : . : . : . :
rJMSF040I23+ CAGTCACTATCCAAGCTCGCAAACCAGGTTTATTTAGATTCAATAGCTGCTTTCACAAAC
rJMSF052B19+ CAGTCACTATCCAAGCTCGCAAACCAGGTTTATTTAGATTCAATAGCTGCTTTCACAAAC
rJMSF012N02+ CAGTCACTATCCAAGCTCGCAAACCAGGTTTATTTAGATTCAATAGCTGCTTTCACAAAC
rJMSF024I03+ CAGTCACTATCCAAGCTCGCAAACCAGGTTTATTTAGATTCAATAGCTGCTTTCACAAAC
                      ____________________________________________________________
consensus CAGTCACTATCCAAGCTCGCAAACCAGGTTTATTTAGATTCAATAGCTGCTTTCACAAAC
 
. : . : . : . : . : . :
rJMSF040I23+ AAGGATGCCAAAGCTTTGAGTGTTCATAGTCAGAAGTTCCTGCAACTTATCAAAGACATT
rJMSF052B19+ AAGGATGCCAAAGCTTTGAGTGTTCATAGTCAGAAGTTCCTGCAACTTATCAAAGACATT
rJMSF012N02+ AAGGATGCCAAAGCTTTGAGTGTTCATAGTCAGAAGTTCCTGCAACTTATCAAAGACATT
rJMSF024I03+ AAGGATGCCAAAGCTTTGAGTGTTCATAGTCAGAAGTTCCTGCAACTTATCAAAGACATT
                      ____________________________________________________________
consensus AAGGATGCCAAAGCTTTGAGTGTTCATAGTCAGAAGTTCCTGCAACTTATCAAAGACATT
 
. : . : . : . : . : . :
rJMSF040I23+ GACGTACTTCTTGCTGCGGATGATGGTTGTCTCCTCGGGACCTGGCTTGAAAGTGCAAAA
rJMSF052B19+ GACGTACTTCTTGCTGCGGATGATGGTTGTCTCCTCGGGACCTGGCTTGAAAGTGCAAAA
rJMSF012N02+ GACGTACTTCTTGCTGCGGATGATGGTTGTCTCCTCGGGACCTGGCTTGAAAGTGCAAAA
rJMSF024I03+ GACGTACTTCTTGCTGCGGATGATGGTTGTCTCCTCGGGACCTGGCTTGAAAGTGCAAAA
                      ____________________________________________________________
consensus GACGTACTTCTTGCTGCGGATGATGGTTGTCTCCTCGGGACCTGGCTTGAAAGTGCAAAA
 
. : . : . : . : . : . :
rJMSF040I23+ AGCCTGACAGAAAATTCTAACGAGACAAAACAGTATGAATGGAATGCTAGGACACAAGTG
rJMSF052B19+ AGCCTGACAGAAAATTCTAACGAGACAAAACAGTATGAATGGAATGCTAGGACACAAGTG
rJMSF012N02+ AGCCTGACAGAAAATTCTAACGAGACAAAACAGTATGAATGGAATGCTAGGACACAAGTG
rJMSF024I03+ AGCCTGGCAGAAAATTCTAACGAGACAAAACAGTATGAATGGAATGCTAGGACACAAGTG
                      ____________________________________________________________
consensus AGCCTGACAGAAAATTCTAACGAGACAAAACAGTATGAATGGAATGCTAGGACACAAGTG
 
. : . : . : . : . : . :
rJMSF040I23+ ACAATGTGGTTTGATACGACAAAATACGTTCAGAGCAAGCTTCATGATTATGCGAATAAG
rJMSF052B19+ ACAATGTGGTTTGATACGACAAAATACGTTCAGAGCAAGCTTCATGATTATGCGAATAAG
rJMSF012N02+ ACAATGTGGTTTGATACGACAAAATACGTTCAGAGCAAGCTTCATGATTATGCGAATAAG
rJMSF024I03+ ACAATGTGGTTTGATACGACAAAATACGTTCAGAGCAAGCTTCATGATTATGCGAATAAG
                      ____________________________________________________________
consensus ACAATGTGGTTTGATACGACAAAATACGTTCAGAGCAAGCTTCATGATTATGCGAATAAG
 
. : . : . : . : . : . :
rJMSF040I23+ TTCTGGAGCGGGCTCTTGGAAAGCTACTATCTGCCACGAGCCTCGATGTATTTCAATCAT
rJMSF052B19+ TTCTGGAGCGGGCTCTTGGAAAGCTACTATCTGCCACGAGCCTCGATGTATTTCAATCAT
rJMSF012N02+ TTCTGGAGCGGGCTCTTGGAAAGCTACTATCTGCCACGAGCCTCGATGTATTTCAATCAT
rJMSF024I03+ TTCTGGAGCGGGCTCTTGGAAAGCTACTATCTGCCACGAGCCTCGATGTATTTCAATCAT
                      ____________________________________________________________
consensus TTCTGGAGCGGGCTCTTGGAAAGCTACTATCTGCCACGAGCCTCGATGTATTTCAATCAT
 
. : . : . : . : . : . :
rJMSF040I23+ CTGTCGAGGAGCTTGAACGAAAACGTGGAGTTCAAGGTGGAGGAATGGAGAAAAGAGTGG
rJMSF052B19+ CTGTCGAGGAGCTTGAACGAAAACGTGGAGTTCAAGGTGGAGGAATGGAGAAAAGAGTGG
rJMSF012N02+ CTGTCGAGGAGCTTGAACGAAAACGTGGAGTTCAAGGTGGAGGAATGGAGAAAAGAGTGG
rJMSF024I03+ CTGTCGAGGAGCTTGAACGAAAACGTGGAGTTCAAGGTGGAGGAATGGAGAAAAGAGTGG
                      ____________________________________________________________
consensus CTGTCGAGGAGCTTGAACGAAAACGTGGAGTTCAAGGTGGAGGAATGGAGAAAAGAGTGG
 
. : . : . : . : . : . :
rJMSF040I23+ ATTGCGTTTTCGGAGAAATGGCAGAGAGGTTCAGAGCTTTACCCAGTGAAGGCACAAGGT
rJMSF052B19+ ATTGCGTTTTCGGAGAAATGGCAGAGAGGTTCAGAGCTTTACCCAGTGAAGGCACAAGGT
rJMSF012N02+ ATTGCGTTTTCGGAGAAATGGCAGAGAGGTTCAGAGCTTTACCCAGTGAAGGCACAAGGT
rJMSF024I03+ ATTGCGTTTTCGGAGAAATGGCAGAGAGGTTCAGAGCTTTACCCAGTGAAGGCACAAGGT
                      ____________________________________________________________
consensus ATTGCGTTTTCGGAGAAATGGCAGAGAGGTTCAGAGCTTTACCCAGTGAAGGCACAAGGT
 
. : . : . : . : . : . :
rJMSF040I23+ GATGCTTTAGCTATTGCAAATGCTCTGTACCAAAAGTACTTTAGCTGAGGCTTGGAATTG
rJMSF052B19+ GATGCTTTAGCTATTGCAAATGCTCTGTACCAAAAGTACTTTAGCTGAGGCTTGGAATTG
rJMSF012N02+ GATGCTTTAGCTATTGCAAATGCTCTGTACCAAAAGTACTTTAGCTGAGGCTTGGAATTG
rJMSF024I03+ GATGCTTTAGCTATTGCAAATGCTCTGTACCAAAAGTACTTTAGCTGAGGCTTGGAATTG
                      ____________________________________________________________
consensus GATGCTTTAGCTATTGCAAATGCTCTGTACCAAAAGTACTTTAGCTGAGGCTTGGAATTG
 
. : . : . : . : . : . :
rJMSF040I23+ C
rJMSF052B19+ C
rJMSF012N02+ CATTGCACAACTGTGTGGAACTATATCTAAACATAATAAAAGATC
rJMSF024I03+ CATTGCACAACTGTGTGGAACTATATCTAAACATAATAAAAGATCATTTTGCAATAACAG
                      ____________________________________________________________
consensus CATTGCACAACTGTGTGGAACTATATCTAAACATAATAAAAGATCATTTTGCAATAACAG
 
. : . : . : . : . : . :
rJMSF024I03+ GAGCCATGGGATCATAATTGCACATTACTAGCACTGCTGTAAAAGATCTGTTTATTCAAT
                      ____________________________________________________________
consensus GAGCCATGGGATCATAATTGCACATTACTAGCACTGCTGTAAAAGATCTGTTTATTCAAT