Contig 002828:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023K10Sequence533023717585002828 (3)emb|CBI19229.3|2e-60unnamed protein product [Vitis vinifera]
JMSF018I09Sequence575024151ref|XP_009799743.1|4e-56PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like [681002828 (3)emb|CDP16400.1|5e-76unnamed protein product [Coffea canephora]
JMSF050D17Sequence672023291ref|XP_009799743.1|1e-77PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like [746002828 (3)emb|CBI19229.3|2e-97unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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rJMSF050D17+                      AGTGGTTTGATGATGCCATGGCAGCAGGCTTGAAGGAACCAAATGCTA
                      ____________________________________________________________
consensus                         AGTGGTTTGATGATGCCATGGCAGCAGGCTTGAAGGAACCAAATGCTA
 
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rJMSF050D17+          TGGCCTTGTCCACAACTGGAAAAGATGGGAAGCCTTNTTCAAGAATGGTGTTGCTAAAGG
rJMSF018I09+                                                 CAAGAATGGTGTTGCTAAAGG
                      ____________________________________________________________
consensus             TGGCCTTGTCCACAACTGGAAAAGATGGGAAGCCTTNTTCAAGAATGGTGTTGCTAAAGG
 
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rJMFF023K10+                                        CCAATTATGCAAGTCGCAAGGCTCGGGACA
rJMSF050D17+          GAGTTGACAAAGATCGCTTTGTTTGGTACACCAATTATGCAAGTCGCAAGGCTCGGGACA
rJMSF018I09+          GAGTTGACAAAGATCGCTTTGTTTGGTACACCAATTATGCAAGTNGCAAGGCTCGGGNCA
                      ____________________________________________________________
consensus             GAGTTGACAAAGATCGCTTTGTTTGGTACACCAATTATGCAAGTCGCAAGGCTCGGGACA
 
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rJMFF023K10+          TATCTGAAAACCCTCATGCTGCCCTTCTTTTTTACTGGGATGCTTTAAACCNCCAGGTAA
rJMSF050D17+          TATCTGAAAACCCTCATGCTGCACTTCTTTTTTACTGGGATGCTTTAAACCGCCAGGTAA
rJMSF018I09+          TATCTGAAAACCCTCATGCTGCNCTTCTTTTTTACTGGGNTGCTTTAAACCGCCAGGTAA
                      ____________________________________________________________
consensus             TATCTGAAAACCCTCATGCTGCCCTTCTTTTTTACTGGGATGCTTTAAACCGCCAGGTAA
 
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rJMFF023K10+          GAATAGAAGGATNTGTAGAAAAGGTTTNTGATGAGGAATCTGTGAAGTACTTCCATAGTC
rJMSF050D17+          GAATAGAAGGATCTGTAGAAAAGGTTTNTGATGAGGAATCTGTGAAGTACTTCCATAGTN
rJMSF018I09+          GAATAGAAGGATCTGTAGAAAAGGTTTNTGATGAGGAATNTGNGAAGTACTTCCATAGTC
                      ____________________________________________________________
consensus             GAATAGAAGGATCTGTAGAAAAGGTTTNTGATGAGGAATCTGTGAAGTACTTCCATAGTC
 
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rJMFF023K10+          GTCCTCGTGGNAGTCAGATTGGCGCCATAGCTAGCAAGCAGAGTACAGTAATTCCCGGNC
rJMSF050D17+          GTCCTCGTGGAAGTCAGATTGGCGCCATAGCTAGCAAGCNGAGTACNGTAATTCCCGGAC
rJMSF018I09+          GTCCTCGTGGAAGTCAGATTGGCGCCATAGCTAGCNAGCAGAGTACNGTAATTCCCGGAC
                      ____________________________________________________________
consensus             GTCCTCGTGGAAGTCAGATTGGCGCCATAGCTAGCAAGCAGAGTACAGTAATTCCCGGAC
 
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rJMFF023K10+          GTCAAGTTNTCCNCCATGAATACAAAGAGTTGGAGATGAAGTNCTNTGACGGGAGTNCGA
rJMSF050D17+          GTCAAGTTNTCCNCCNTGAATACAAAGAGTTGGAGATGAAGTACTNTGACGGGAGTACGA
rJMSF018I09+          GTCAAGTTCTCCNCCNTGAATACAAAGAGTTGGNGATGAAGTACTNTGACGGGAGTNCGA
                      ____________________________________________________________
consensus             GTCAAGTTCTCCNCCATGAATACAAAGAGTTGGAGATGAAGTACTNTGACGGGAGTACGA
 
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rJMFF023K10+          TTCCCAAACCAACNCNCTGGGGAGGATACATGCTGAAACCAGAATCGTTTGAATTTTGGC
rJMSF050D17+          TTCCCNAACCNACNCNCTGGGGNGGATACATGCTGAAACCNGAATCGTTTGAATTTTGGC
rJMSF018I09+          TTCCCAAACCAACNCNCTGGGGAGGATACATGCTGAAACCNGAATCGTTTGAATTTTGGC
                      ____________________________________________________________
consensus             TTCCCAAACCAACNCNCTGGGGAGGATACATGCTGAAACCAGAATCGTTTGAATTTTGGC
 
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rJMFF023K10+          AAGGACAGCAATNTCGCTTGCATGATAGGTTACGCTATTGTCCAGAAGAGGTGGATGGAA
rJMSF050D17+          AAGGACAGCAATCTCGCTTGCNTGATAGGTTACGCTATTGTCCNGAAGAGGTGGATGGAA
rJMSF018I09+          AAGGACAGCAATCTCGCTTGCNTGATAGGTTACGCTATTGTCCNGAAGAGGTGGATGGAA
                      ____________________________________________________________
consensus             AAGGACAGCAATCTCGCTTGCATGATAGGTTACGCTATTGTCCAGAAGAGGTGGATGGAA
 
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rJMFF023K10+          AGCGAGTTTGGAGAATAGAGCGATTGGCTCCCTGACAAATGGCTTCCTTGTTATGATCAT
rJMSF050D17+          AGCGAGTTTGGAGAATAGAGCGATTGGCTCCCTGACAAATGGCTTCCTTGTTATGATCAT
rJMSF018I09+          AGCGAGTTTGGAGAATAGAGCGATTGGCTCCCTGACAAATGGCTTCCTTGTTATGNTCAT
                      ____________________________________________________________
consensus             AGCGAGTTTGGAGAATAGAGCGATTGGCTCCCTGACAAATGGCTTCCTTGTTATGATCAT
 
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rJMFF023K10+          GTCATCTNTTATGTTNTCACTCACTGCCACAACCCCATTTTGCTCAAAACTTTACATTTT
rJMSF050D17+          GTCATCTNTTATGTTCTCACTCACTGCCNCAACCCCNTTTTGCTCAAAACTTTACNTTTT
rJMSF018I09+          GTCATCTNTTATGTTNTCACTCACTGCCNCAACCCCNTTTTGNTCAAAACTTTACATTTT
                      ____________________________________________________________
consensus             GTCATCTNTTATGTTCTCACTCACTGCCACAACCCCATTTTGCTCAAAACTTTACATTTT
 
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rJMFF023K10+          TTTTTTGAAAGGAAAACTTTACATTCTTGATTGTATGTTCAAACAAGAAGTTGATCCACA
rJMSF050D17+          TTTTTTGAAAGGAAAACTTTACATTCTTGATTGTATGTTCAAACAAGAAGTTGATCCACA
rJMSF018I09+          TTTTTTGAAAGGAAAACTTTACATTCTTGATTGTATGTTCAAACAAGAAGTTGATCCACA
                      ____________________________________________________________
consensus             TTTTTTGAAAGGAAAACTTTACATTCTTGATTGTATGTTCAAACAAGAAGTTGATCCACA
 
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rJMFF023K10+          GAAATTGGTTATCAA                                             
rJMSF050D17+          GAAATTGGTTATCAAGAAC                                         
rJMSF018I09+          GAAATTGGTTATCAAGAACTTGATAGGGAAATACAAATGTACCAAATAAAGCAGAAAGAT
                      ____________________________________________________________
consensus             GAAATTGGTTATCAAGAACTTGATAGGGAAATACAAATGTACCAAATAAAGCAGAAAGAT