Contig 002820: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF001E11+ TTTTG
rJMSF037I15+ GTCTTTGGAATCGAAACTCAGTTTTTG
rJMSF017J09+ TTTTG
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consensus GTCTTTGGAATCGAAACTCAGTTTTTG
. : . : . : . : . : . :
rJMSF001E11+ CAATGGAGATGAAAGTTTTGTGTCCCGAAGTACTAAACTCAACCCTCCTGATAAGAAACC
rJMSF037I15+ CAATGGAGATGAAAGTTTTGTGTCCCGAAGTACTAAACTCAACCCTCCTGATAAGAAACC
rJMSF017J09+ CAATGGAGATGAAAGTTTTGTGTCCCGAAGTACTAAACTCAACCCTCCTGATAAGAAACC
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consensus CAATGGAGATGAAAGTTTTGTGTCCCGAAGTACTAAACTCAACCCTCCTGATAAGAAACC
. : . : . : . : . : . :
rJMSF001E11+ TGCCATTTCTTCCATTCCTCAGAGCCAATTTCTAGGTAAAGTGAAGGATTTCCTGGGAGT
rJMSF037I15+ TGCCATTTCTTCCATTCCTCAGAGCCAATTTCTAGGTAAAGTGAAGGATTTCCTGGGAGT
rJMSF017J09+ TGCCATTTCTTCCATTCCTCAGAGCCAATTTCTAGGTAAAGTGAAGGATTTCCTGGGAGT
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consensus TGCCATTTCTTCCATTCCTCAGAGCCAATTTCTAGGTAAAGTGAAGGATTTCCTGGGAGT
. : . : . : . : . : . :
rJMSF001E11+ GATATCGGAAGCAAATAAAACTTTGGAGCTTGATGCGAAAACGAATCCAGGGAAGAAGTA
rJMSF037I15+ GATATCGGAAGCAAATAAAACTTTGGAGCTTGATGCGAAAACGAATCCAGGGAAGAAGTA
rJMSF017J09+ GATATCGGAAGCAAATAAAACTTTGGAGCTTGATGCGAAAACGAATCCAGGGAAGAAGTA
____________________________________________________________
consensus GATATCGGAAGCAAATAAAACTTTGGAGCTTGATGCGAAAACGAATCCAGGGAAGAAGTA
. : . : . : . : . : . :
rJMSF001E11+ CGATATAGAAGCTCTGACTGGGGAAGAATCTGAATATATTGAAATGGACTTGATGCTTGG
rJMSF037I15+ CGATATAGAAGCTCTGACTGGGGAAGAATCTGAATATATTGAAATGGACTTGATGCTTGG
rJMSF017J09+ CGATATAGAAGCTCTGACTGGGGAAGAATCTGAATATATTGAAATGGACTTGATGCTTGG
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consensus CGATATAGAAGCTCTGACTGGGGAAGAATCTGAATATATTGAAATGGACTTGATGCTTGG
. : . : . : . : . : . :
rJMSF001E11+ TGTTGCAGAGCTGCAAACTGAGGAAGCTGTAGCTGCTGCTGAGTCTGCATTATCTGGTTA
rJMSF037I15+ TGTTGCAGAGCTGCAAACTGAGGAAGCTGTAGCTGCTGCTGAGTCTGCATTATCTGGTTA
rJMSF017J09+ TGTTGCAGAGCTGCAAACTGAGGAAGCTGTAGCTGCTGCTGAGTCTGCATTATCTGGTTA
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consensus TGTTGCAGAGCTGCAAACTGAGGAAGCTGTAGCTGCTGCTGAGTCTGCATTATCTGGTTA
. : . : . : . : . : . :
rJMSF001E11+ TCAACCGGTGATTCCTTTGGCTGTTAGTAGTAGCGAGACGGAATCAGAAGAGAGCAGTGA
rJMSF037I15+ TCAACCGGTGATTCCTTTGGCTGTTAGTAGTAGCGAGACGGAATCAGAAGAGAGCAGTGA
rJMSF017J09+ TCAACCGGTGATTCCTTTGGCTGTTAGTAGTAGCGAGACGGAATCAGAAGAGAGCAGTGA
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consensus TCAACCGGTGATTCCTTTGGCTGTTAGTAGTAGCGAGACGGAATCAGAAGAGAGCAGTGA
. : . : . : . : . : . :
rJMSF001E11+ TGATGAGGATAGCGAGGATAGCGATGGAGATGATGATGAAGCTGAGAGACCTTTTCCTAA
rJMSF037I15+ TGATGAGGATAGCGAGGATAGCGATGGAGATGATGATGAAGCTGAGAGACCTTTTCCTAA
rJMSF017J09+ TGATGAGGATAGCGAGGATAGCGATGGAGATGATGATGAAGCTGAGAGACCTTTTCCTAA
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consensus TGATGAGGATAGCGAGGATAGCGATGGAGATGATGATGAAGCTGAGAGACCTTTTCCTAA
. : . : . : . : . : . :
rJMSF001E11+ AAAGGGGAAAACTGCTAACCCTGTTGAAAAGGATTCTTCTTCCAGTGAAGCATCAAAGAA
rJMSF037I15+ AAAGGGGAAAACTGCTAACCCTGTTGAAAAGGATTCTTCTTCCAGTGAAGCATCAAAGAA
rJMSF017J09+ AAAGGGGAAAACTGCTAACCCTGTTGAAAAGGATTCTTCTTCCAGTGAAGCATCAAAGAA
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consensus AAAGGGGAAAACTGCTAACCCTGTTGAAAAGGATTCTTCTTCCAGTGAAGCATCAAAGAA
. : . : . : . : . : . :
rJMSF001E11+ TAAGCAGCAGCCAAGAAAGAGACCAAAAATTGTTGAGCTTTCGTAGGACTTGTGTGGGTG
rJMSF037I15+ TAAGCAGCAGCCAAGAAAGAGACCAAAAATTGTTGAGCTTTCGTAGGACTTGTGTGGGTG
rJMSF017J09+ TAAGCAGCAGCCAAGAAAGAGACCAAAAATTGTTGAGCTTTCGTAGGACTTGTGTGGGTG
____________________________________________________________
consensus TAAGCAGCAGCCAAGAAAGAGACCAAAAATTGTTGAGCTTTCGTAGGACTTGTGTGGGTG
. : . : . : . : . : . :
rJMSF001E11+ GAGGCCTGGACATGGAATATAGAAGATGAGAGGGATCTGCAAATTTTCTCTGGAAGTAGT
rJMSF037I15+ GAGGCCTGGACATGGAATATAGAAGATGAGAGGGATCTGCAAATTTTCTCTGGAAGTAGT
rJMSF017J09+ GAGGCCTGGACATGGAATATAGAAGATGAGAGGGATCTGCAAATTTTCTCTGGAAGTAGT
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consensus GAGGCCTGGACATGGAATATAGAAGATGAGAGGGATCTGCAAATTTTCTCTGGAAGTAGT
. : . : . : . : . : . :
rJMSF001E11+ TCCAAGAAGAGAGGATTTTGAATGTGTACTTTGTCTTCTATTCTGAGGAATCAATCCTAT
rJMSF037I15+ TCCAAGAAGAGAGGATTTTGAATGTGTACTTTGTCTTCTATTCTGAGGAATCAATCCTAT
rJMSF017J09+ TCCAAGAAGAGAGGATTTTGAATGTGTACTTTGTCTTCTATTCTGAGGAATCAATCCTAT
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consensus TCCAAGAAGAGAGGATTTTGAATGTGTACTTTGTCTTCTATTCTGAGGAATCAATCCTAT
. : . : . : . : . : . :
rJMSF001E11+ ATTTCTATTTGCATTAC
rJMSF037I15+ ATTTCTATTTGCATTAC
rJMSF017J09+ ATTTCTATTTGCATTACATGGTTTTGTTAAAGCTATTTTACTAGCATCATGATTGATCCA
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consensus ATTTCTATTTGCATTACATGGTTTTGTTAAAGCTATTTTACTAGCATCATGATTGATCCA