Contig 002818:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF038K16+                                               ACGCTTGGAAAGAAGGGTAAAAC
                      ____________________________________________________________
consensus                                                  ACGCTTGGAAAGAAGGGTAAAAC
 
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rJMSF038K16+          GGATGAGGCCATACTGGCTGTAGAAGACATGGAAAGACGAGGAATAGTGGGCACTGCTAG
                      ____________________________________________________________
consensus             GGATGAGGCCATACTGGCTGTAGAAGACATGGAAAGACGAGGAATAGTGGGCACTGCTAG
 
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rJMSF038K16+          TTTGTATTATGATCTTGCTCGTTGTCTTTGTAGTGCAGGAAGGTGGCAGGAGGCGCTAAT
                      ____________________________________________________________
consensus             TTTGTATTATGATCTTGCTCGTTGTCTTTGTAGTGCAGGAAGGTGGCAGGAGGCGCTAAT
 
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rJMSF038K16+          ACAGGTTGACAAAATATGCAAAGTTGCAACAAAGCCTCTAGTGGTGACCTACACTGGTTT
                      ____________________________________________________________
consensus             ACAGGTTGACAAAATATGCAAAGTTGCAACAAAGCCTCTAGTGGTGACCTACACTGGTTT
 
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rJMSF038K16+          AATTAAAGCTTGTATAGATTCTGGGGATGTTCAGAGTGGAGTCTATGTCTTCAACCACAT
rJMSF016G13+                                                             CAACCACAT
                      ____________________________________________________________
consensus             AATTAAAGCTTGTATAGATTCTGGGGATGTTCAGAGTGGAGTCTATGTCTTCAACCACAT
 
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rJMSF038K16+          GCACAACTTTTGCTCACCAAATTTAATAACCTATAATATACTCCTCAAAGCTTACCTTGA
rJMSF016G13+          GCACAACTTTTGCTCACCAAATTTAATAACCTATAATATACTCCTCAAAGCTTACCTTGA
rJMSF017G13+                                  AATAACCTATAATATACTCCTCAAAGCTTACCTTGA
                      ____________________________________________________________
consensus             GCACAACTTTTGCTCACCAAATTTAATAACCTATAATATACTCCTCAAAGCTTACCTTGA
 
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rJMSF038K16+          TCATGAGTTGTTTGAAGAAGCAAAACAATTGTTTCTAGGCTTATTAGAAAATGGAAACTG
rJMSF016G13+          TCATGAGTTGTTTGAAGAAGCAAAACAATTGTTTCTAGGCTTATTAGAAAATGGAAACTG
rJMSF017G13+          TCATGAGTTGTTTGAAGAAGCAAAACAATTGTTTCTAGGCTTATTAGAAAATGGAAACTG
                      ____________________________________________________________
consensus             TCATGAGTTGTTTGAAGAAGCAAAACAATTGTTTCTAGGCTTATTAGAAAATGGAAACTG
 
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rJMSF038K16+          TATTAGAAATAAATCAGATTGTAAAGATATGGTTTTGCCCGATATCCATTCATTTAACTT
rJMSF016G13+          TATTAGAAATAAATCAGATTGTAAAGATATGGTTTTGCCCGATATCCATTCATTTAACTT
rJMSF017G13+          TATTAGAAATAAATCAGATTGTAAAGATATGGTTTTGCCCGATATNCATTCATTTAACTN
                      ____________________________________________________________
consensus             TATTAGAAATAAATCAGATTGTAAAGATATGGTTTTGCCCGATATCCATTCATTTAACTT
 
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rJMSF038K16+          GATGTTGGATGGATTTTCTGCTCAGCTAAAGTGGGATGAAGTCGAGTTTATATACTTACA
rJMSF016G13+          GATGTTGGATGGATTTTCTGCTCAGCTAAAGTGGGATGAAGTCGAGTTTATATACTTACA
rJMSF017G13+          GATGTTGGATGGATNTTCTGCTCAGCTAAAGTGGGATGAAGTCGAGTTTATATACTTACA
                      ____________________________________________________________
consensus             GATGTTGGATGGATTTTCTGCTCAGCTAAAGTGGGATGAAGTCGAGTTTATATACTTACA
 
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rJMSF038K16+          AATGCTGAAACATGGATACCACTTCAATCCAAAACGCCACCTTCGCATAGTACTACACTC
rJMSF016G13+          AATGCTGAAACATGGATACCACTTCAATCCAAAACGCCACCTTCGCATAGTACTACACTC
rJMSF017G13+          AATGCTGAAACATGGATACCACTTCAATCCAAAACGCCACCTTCGCATAGTACTACACTC
                      ____________________________________________________________
consensus             AATGCTGAAACATGGATACCACTTCAATCCAAAACGCCACCTTCGCATAGTACTACACTC
 
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rJMSF038K16+          CTGCAATGCTGGAAAGGTGGGAATTTTGGAAGCGACATGGAAGCATTTGGACCAGGTCGA
rJMSF016G13+          CTGCAATGCTGGAAAGGTGGGAATTTTGGAAGCGACATGGAAGCATTTGGACCAGTTCGA
rJMSF017G13+          CTGCAATGCTGGAAAGGTGGGAATTTTGGAAGCGACATGGAAGCATTTGGACCAGTTCGA
                      ____________________________________________________________
consensus             CTGCAATGCTGGAAAGGTGGGAATTTTGGAAGCGACATGGAAGCATTTGGACCAGTTCGA
 
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rJMSF038K16+          TAGGAAACCTCCACCACCCCTAGTCAAAGAAATGTTTCTGGTGTTGTTGGGAAGACGGGA
rJMSF016G13+          TAGGAAACCTCCACCACCCCTAGTCAAAGAAATGTTTCTGGTGTTGTTGGGAAGACGGGA
rJMSF017G13+          TAGGAAACCTCCACCACCCCTAGTCAAAGAAATGTTTCTGGTGTTGTTGGGAAGACGGGA
                      ____________________________________________________________
consensus             TAGGAAACCTCCACCACCCCTAGTCAAAGAAATGTTTCTGGTGTTGTTGGGAAGACGGGA
 
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rJMSF038K16+          CTTTACTTCTGCCCTTGCCTGTGTTGTTGCTCGGGCGCCTACTGAGTCGCAGGTATTTTC
rJMSF016G13+          CTTTACTTCTGCCCTTGCCTGTGTTGTTGCTCGGGCGCCTACTGAGTCGCAGGTATTTTC
rJMSF017G13+          CTTTACTTCTGCCCTTGCCTGTGTTGTTGCTCGGGCGCCTACTGAGTCGCAGGTATTTTC
                      ____________________________________________________________
consensus             CTTTACTTCTGCCCTTGCCTGTGTTGTTGCTCGGGCGCCTACTGAGTCGCAGGTATTTTC
 
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rJMSF038K16+          CGCCAAGTGCTGGTTACAGTTTTTGAATGGCAACCGCCATCGCATAGAGTCAGATAAACT
rJMSF016G13+          CGCCAAGTGCTGGTTACAGTTTTTGAATGGCAACCGCCATCGCATAGAGTCAGATAAACT
rJMSF017G13+          CGCCAAGTGCTGGTTACAGTTTTTGAATGGCAACCGCCATCGCATAGAGTCAGATAAACT
                      ____________________________________________________________
consensus             CGCCAAGTGCTGGTTACAGTTTTTGAATGGCAACCGCCATCGCATAGAGTCAGATAAACT
 
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rJMSF038K16+          TGTTGCATTGCTATATGAGCTTAGCATGTGTAGTGGTAGGACTGAAAATGTTTTGCTAGA
rJMSF016G13+          TGTTGCATTGCTATATGAGCTTAGCATGTGTAGTGGTAGGACTGAAAATGTTTTGCTAGA
rJMSF017G13+          TGTTGCATTGCTATATGAGCTTAGCATGTGTAGTGGTAGGACTGAAAATGTTTTGCTAGA
                      ____________________________________________________________
consensus             TGTTGCATTGCTATATGAGCTTAGCATGTGTAGTGGTAGGACTGAAAATGTTTTGCTAGA
 
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rJMSF038K16+          GAATCTAATGGCTTCTTGTAAAGAATTTT                               
rJMSF016G13+          GAATCTAATGGCTTCTTGTAAAGAATTTTTGAGTACTCATAGTGATATGGCATAGGTTTA
rJMSF017G13+          GAATCTAATGGCTTCTTGTAAAGAATTTTTGAGTACTCATAGTGATATGGCATAGGTTTA
                      ____________________________________________________________
consensus             GAATCTAATGGCTTCTTGTAAAGAATTTTTGAGTACTCATAGTGATATGGCATAGGTTTA
 
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rJMSF016G13+          CTTTGGCACCCTATCTGGTTTAGTCAAATAGCATAGGTTTATGCAGAAATTCAGTGTCCC
rJMSF017G13+          CTTTGGCACCCTATCTGGTTTAGTCAAATAGCATAGGTTTATGCAGAAATTCAGTGTCCC
                      ____________________________________________________________
consensus             CTTTGGCACCCTATCTGGTTTAGTCAAATAGCATAGGTTTATGCAGAAATTCAGTGTCCC
 
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rJMSF016G13+          TGCCTATGAATATGTGACATCCTGACTACCACTCAGTCACAGAATTTGTGGAAATAGTGT
rJMSF017G13+          TGCCTATGAATATGTGACATCCTGACTACCACTCAGTCACAGAATTTGTGGAAATAGTGT
                      ____________________________________________________________
consensus             TGCCTATGAATATGTGACATCCTGACTACCACTCAGTCACAGAATTTGTGGAAATAGTGT