Contig 002809:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015N22Sequence499006632 (3)ref|XP_009787496.1|2e-15PREDICTED: light-inducible protein CPRF2-like [Nicotiana sylvestris]789002809 (3)ref|NP_001236299.1|6e-74G/HBF-1 protein [Glycine max] emb|CAA71687.1| G/HBF-1 [Glycine max]
JMSF038C16Sequence640006632 (3)867002809 (3)ref|XP_009610430.1|2e-68PREDICTED: light-inducible protein CPRF2 [Nicotiana tomentosiformis]
JMSF050K23Sequence680014779ref|XP_009588467.1|3e-84PREDICTED: probable protein phosphatase 2C 15 isoform X1 [Nicotiana tomentosifo774002809 (3)ref|XP_009797322.1|2e-73PREDICTED: light-inducible protein CPRF2-like, partial [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038C16+ ATTGCATGGATCCTCAAGATT
                      ____________________________________________________________
consensus ATTGCATGGATCCTCAAGATT
 
. : . : . : . : . : . :
rJMSF038C16+ CAGCCACCATGTTGCCTGACAAAGGATTAGAGGCATCCATTTCCAACCCAGGATCTGTGG
                      ____________________________________________________________
consensus CAGCCACCATGTTGCCTGACAAAGGATTAGAGGCATCCATTTCCAACCCAGGATCTGTGG
 
. : . : . : . : . : . :
rJMSF038C16+ TCCCTCCTAAAGGATCTGGGAATGATTTTCCCAAGGGGGATGCTGAAGGGCCTGCTGGAA
                      ____________________________________________________________
consensus TCCCTCCTAAAGGATCTGGGAATGATTTTCCCAAGGGGGATGCTGAAGGGCCTGCTGGAA
 
. : . : . : . : . : . :
rJMSF038C16+ CATCTACCTTACCTGCAGTGCAGAAGAAATCTAGTGCCAGGGCACAGTCAGCAAGTGGCT
                      ____________________________________________________________
consensus CATCTACCTTACCTGCAGTGCAGAAGAAATCTAGTGCCAGGGCACAGTCAGCAAGTGGCT
 
. : . : . : . : . : . :
rJMSF038C16+ CAGAACCGTCTGATGATGATGAAGCTGAAGGGGAAGCAGAAACAACTCACCGAACTGATG
                      ____________________________________________________________
consensus CAGAACCGTCTGATGATGATGAAGCTGAAGGGGAAGCAGAAACAACTCACCGAACTGATG
 
. : . : . : . : . : . :
rJMSF038C16+ CAAAACGTGTAAGGAGAGAATCAGCTAGACGTTCTAGAAGAAGAAAGCAGGTCCATCTGA
rJMSF050K23+ AGAGAATCAGCTAGACGTTCTAGAAGAAGAAAGCAGGTCCATCTGA
rJMSF015N22+ AGAGAATCAGCTAGACGTTCTAGAAGAAGAAAGCAGGTCCATCTGA
                      ____________________________________________________________
consensus CAAAACGTGTAAGGAGAGAATCAGCTAGACGTTCTAGAAGAAGAAAGCAGGTCCATCTGA
 
. : . : . : . : . : . :
rJMSF038C16+ CGGACTTGGAGACACAGGTTTCTCAATTGAAAGTTGAAAACTCCTCTTTATTGAAGCGTT
rJMSF050K23+ CGGACTTGGAGACACAGGTTTCTCAATTGAAAGTTGAAAACTCCTCTTTATTGAAGCGTT
rJMSF015N22+ CGGACTTGGAGACACAGGTTTCTCAATTGAAAGTTGAAAACTCCTCTTTATTGAAGCGTT
                      ____________________________________________________________
consensus CGGACTTGGAGACACAGGTTTCTCAATTGAAAGTTGAAAACTCCTCTTTATTGAAGCGTT
 
. : . : . : . : . : . :
rJMSF038C16+ GGACTGAAGTAAGCCAAAAACATAACGACGCAGCAGTTGACAATAGAATCTTGAAAGCGG
rJMSF050K23+ GGACTGAAGTAAGCCAAAAACATAACGACGCAGCAGTTGACAATAGAATCTTGAAAGCGG
rJMSF015N22+ GGACTGAAGTAAGCCAAAAACATAGCGACGCAGCAGTTGACAATAGAATCTTGAAAGCGG
                      ____________________________________________________________
consensus GGACTGAAGTAAGCCAAAAACATAACGACGCAGCAGTTGACAATAGAATCTTGAAAGCGG
 
. : . : . : . : . : . :
rJMSF038C16+ ATGTTGAGACACTAAGAGCAAAGGTGAAGATGGCTGAGGAAACAGTTAAAAGAATTACTG
rJMSF050K23+ ATGTTGAGACACTAAGAGCAAAGGTGAAGATGGCTGAGGAAACAGTTAAAAGAATTACTG
rJMSF015N22+ ATGTTGAGACACTAAGAGCAAAGGTGAAGATGGCTGAGGAAACAGTTAAAAGAATTACTG
                      ____________________________________________________________
consensus ATGTTGAGACACTAAGAGCAAAGGTGAAGATGGCTGAGGAAACAGTTAAAAGAATTACTG
 
. : . : . : . : . : . :
rJMSF038C16+ GGATGCATTCACTATTCCAAACTATGCCCGAGATACCCACATTGAGCATACCATCCTTCG
rJMSF050K23+ GGATGCATTCACTATTCCAAACTATGCCCGAGATACCCACATTGAGCATACCATCCTTCG
rJMSF015N22+ GGATGCATTCACTATTCCAAACTATGCCCGAGATACCCACATTGAGCATACCATCCTTCG
                      ____________________________________________________________
consensus GGATGCATTCACTATTCCAAACTATGCCCGAGATACCCACATTGAGCATACCATCCTTCG
 
. : . : . : . : . : . :
rJMSF038C16+ TTGATAGCCATTCCGACACATCAGCCGATGCTACTGTACCGCTGCAAGAAGATGCTGATA
rJMSF050K23+ TTGATAGCCATTCCGACACATCAGCCGATGCTACTGTACCGCTGCAAGAAGATGCTGATA
rJMSF015N22+ TTGATAGCCATTCCGACACATCAGCCGATGCTACTGTACCGCTGCAAGAAGATGCTGATA
                      ____________________________________________________________
consensus TTGATAGCCATTCCGACACATCAGCCGATGCTACTGTACCGCTGCAAGAAGATGCTGATA
 
. : . : . : . : . : . :
rJMSF038C16+ ACCACTACTACCAATCCCTTTGCCATGATTCTAGTATCCAGAATGGCTTGCTGGACATCC
rJMSF050K23+ ACCACTACTACCAATCCCTTTGCCATGATTCTAGTATCCAGAATGGCTTGCTGGACATCC
rJMSF015N22+ ACCACTACTACCAATCCCTTTGCCATGATTCTAGTATCCAGAATGGCTTGCTGGACATCC
                      ____________________________________________________________
consensus ACCACTACTACCAATCCCTTTGCCATGATTCTAGTATCCAGAATGGCTTGCTGGACATCC
 
. : . : . : . : . : . :
rJMSF038C16+ CTCCGGTTGATAACGCACGACAGGATTCTGCTGCAACAGCAGGGGTGAACAATATCGGAG
rJMSF050K23+ CTCCGGTTGATAACGCACGACAGGATTCTGCTGCAACAGCAGGGGTGAACAATATCGGAG
rJMSF015N22+ CTCCGGTTGATAACGCACGACAGGATTCTGCTGCAACAGCAGGGGTGAACAATATCGGAG
                      ____________________________________________________________
consensus CTCCGGTTGATAACGCACGACAGGATTCTGCTGCAACAGCAGGGGTGAACAATATCGGAG
 
. : . : . : . : . : . :
rJMSF038C16+ GGATGGCTTCAATGCTGAGAGTGGCCAGCTTGGAAAACCTGCAGAATCGCATCCGCAGAG
rJMSF050K23+ GGATGGCTTCAATGCTGAGAGTGGCCAGCTTGGAAAACCTGCAGAATCGCATCCGCAGAG
rJMSF015N22+ GGATGGCTTCAATGCTGAGAGTGGCCAGCTTGGAAAACCTGCAGAATCGCATCCGCAGAG
                      ____________________________________________________________
consensus GGATGGCTTCAATGCTGAGAGTGGCCAGCTTGGAAAACCTGCAGAATCGCATCCGCAGAG
 
. : . : . : . : . : . :
rJMSF038C16+ AAGCAGGAGGTTCATGTAGAACTCAGTGCAGGATAAGCAAATGATGTGCATAAAGGGACC
rJMSF050K23+ AAGCAGGAGGTTCATGTAGAACTCAGTGCAGGATAAGCAAATGATGTGCATAAAGGGACC
rJMSF015N22+ AAGCAGGAGGTTCATGTAGAACTCAGTGCAGGATAAGCAAATGATGTGCATAAAGGGACC
                      ____________________________________________________________
consensus AAGCAGGAGGTTCATGTAGAACTCAGTGCAGGATAAGCAAATGATGTGCATAAAGGGACC
 
. : . : . : . : . : . :
rJMSF050K23+ TA--ATAAATCTAAACTTTGTGCTAAATCCACCAAAAAACTATTTTGTGCCATGGTTCAT
rJMSF015N22+ TAATATAAATCTAAACTTTGTGCTAAATCCACCAAAAAACTATTTTGTGCCATGGTTCAT
                      ____________________________________________________________
consensus TAATATAAATCTAAACTTTGTGCTAAATCCACCAAAAAACTATTTTGTGCCATGGTTCAT
 
. : . : . : . : . : . :
rJMSF050K23+ GCTAGAAAATGGTTTTGTTTTCAGTGATGGAATGATTCATTTTGCGTGAA
rJMSF015N22+ GCTAGAAAATGGTTTTGTTTTCAGTGATGGAATGATTCATTTTGCGTGAATTCACTGGAT
                      ____________________________________________________________
consensus GCTAGAAAATGGTTTTGTTTTCAGTGATGGAATGATTCATTTTGCGTGAATTCACTGGAT