Contig 002795:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF018H24+                                                     TGCATCAACAAGAGATT
                      ____________________________________________________________
consensus                                                        TGCATCAACAAGAGATT
 
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rJMSF018H24+          CATCTCCTATCCGTCGTACCTTGACATCATCTCCTTATGACAGGAACGGTGATGATGCAA
                      ____________________________________________________________
consensus             CATCTCCTATCCGTCGTACCTTGACATCATCTCCTTATGACAGGAACGGTGATGATGCAA
 
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rJMSF018H24+          AGCGGTCTCCCAGCTATCGTCGTAGTCAAAGCCGTGACATACCTGACAGAGACAGGGATA
rJMSF013A15+                                     AAAGCCGTGACATACCTGACAGAGACAGGGATA
                      ____________________________________________________________
consensus             AGCGGTCTCCCAGCTATCGTCGTAGTCAAAGCCGTGACATACCTGACAGAGACAGGGATA
 
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rJMSF018H24+          AAGACCTGGACCGTGAGAGAGACCGACAGCATGATAGGGATAGGGATAGGGATCGCGACC
rJMSF013A15+          AAGACCTGGACCGTGAGAGAGACCGACAGCATGATAGGGATAGGGATAGGGATCGCGACC
                      ____________________________________________________________
consensus             AAGACCTGGACCGTGAGAGAGACCGACAGCATGATAGGGATAGGGATAGGGATCGCGACC
 
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rJMSF018H24+          GAGACAGGGAGAGGGGTAGGGATCGGGATAGAGAGAGGAGGTATGATTATGATAGAGAGC
rJMSF013A15+          GAGACAGGGAGAGGGGTAGGGATCGGGATAGAGAGAGGAGGTATGATTATGATAGAGAGC
                      ____________________________________________________________
consensus             GAGACAGGGAGAGGGGTAGGGATCGGGATAGAGAGAGGAGGTATGATTATGATAGAGAGC
 
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rJMSF018H24+          GGGATAGGGAGAGAGGTAGAAGGCATGATTATGATAGAGAACGGGAAAGGGATCGAGACA
rJMSF013A15+          GGGATAGGGAGAGAGGTAGAAGGCATGATTATGATAGAGAACGGGAAAGGGATCGAGACA
                      ____________________________________________________________
consensus             GGGATAGGGAGAGAGGTAGAAGGCATGATTATGATAGAGAACGGGAAAGGGATCGAGACA
 
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rJMSF018H24+          GAAGATATGGGGATTATGACAGAAGGGGGTCCAGGGAAAGTAGAAGGGATCATCATGAGA
rJMSF013A15+          GAAGATATGGGGATTATGACAGAAGGGGGTCCAGGGAAAGTAGAAGGGATCATCATGAGA
                      ____________________________________________________________
consensus             GAAGATATGGGGATTATGACAGAAGGGGGTCCAGGGAAAGTAGAAGGGATCATCATGAGA
 
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rJMSF018H24+          GGAGTCGTAGCCGAAGTAGAAGTAGAAGTAAGAGTCAGAGCATGCATGAGCGAGGTGGAA
rJMSF013A15+          GGAGTCGGAGCCGAAGTAGAAGTAGAAGTAAGAGTCAGAGCATGCATGAGCGAGGTGGAA
                      ____________________________________________________________
consensus             GGAGTCGTAGCCGAAGTAGAAGTAGAAGTAAGAGTCAGAGCATGCATGAGCGAGGTGGAA
 
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rJMSF018H24+          GTCTTGATCATCGGCGGAGTCCTCCAGCACAAGATGGAAGCAAAGAGAAGACATCTGTTT
rJMSF013A15+          GTCTTGATCATCGGCGGAGTCCTCCAGCACAAGATGGAAGCAAAGAGAAGACATCTGTTT
                      ____________________________________________________________
consensus             GTCTTGATCATCGGCGGAGTCCTCCAGCACAAGATGGAAGCAAAGAGAAGACATCTGTTT
 
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rJMSF018H24+          CTAGCAACCTGGCTAAACTTAAAGATCTCTATGGTGACTTGGGTAGCAGCCAGAAGGAAG
rJMSF013A15+          CTAGCAACCTGGCTAAACTTAAAGATCTCTATGGTGACTTGGGTAGCAGCCAGAAGGAAG
                      ____________________________________________________________
consensus             CTAGCAACCTGGCTAAACTTAAAGATCTCTATGGTGACTTGGGTAGCAGCCAGAAGGAAG
 
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rJMSF018H24+          ACACAAGCAATAACAGGAGGGACAGTGGTATGGAGGAGGTTATCCGACTCGGTGGCTCTA
rJMSF013A15+          ACACAAGCAATAACAGGAGGGACAGTGGTATGGAGGAGGTTATCCGACTCGGTGGCTCTA
                      ____________________________________________________________
consensus             ACACAAGCAATAACAGGAGGGACAGTGGTATGGAGGAGGTTATCCGACTCGGTGGCTCTA
 
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rJMSF018H24+          CTTGGAGGTAGAGTAGAACCACCCCCACCCTCATGCAAGTTTTATGTTGAGCAGCTGCTT
rJMSF013A15+          CTTGGAGGTAGAGTAGAACCACCCCCACCCTCATGCAAGTTTTATGTTGAGCAGCTGCTT
                      ____________________________________________________________
consensus             CTTGGAGGTAGAGTAGAACCACCCCCACCCTCATGCAAGTTTTATGTTGAGCAGCTGCTT
 
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rJMSF018H24+          GCTACCTGTTGTCATTTGGCATAGCATCAGTAGCAGCATGTATTATTAGACAACAAAGAT
rJMSF013A15+          GCTACCTGTTGTCATTTGGCATAGCATCAGTAGCAGCATGTATTATTAGACAACAAAGAT
                      ____________________________________________________________
consensus             GCTACCTGTTGTCATTTGGCATAGCATCAGTAGCAGCATGTATTATTAGACAACAAAGAT
 
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rJMSF018H24+          ACCATTTTCTTCCCTGTTATTTTCATTGGATATTTAC                       
rJMSF013A15+          ACCATTTTCTTCCCTGTTATTTTCATTGGATATTTACAGTTAGTTCCCCACTTGATGGGG
                      ____________________________________________________________
consensus             ACCATTTTCTTCCCTGTTATTTTCATTGGATATTTACAGTTAGTTCCCCACTTGATGGGG
 
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rJMSF013A15+          GAAGAAACATAATTGTTTGTCTAATTTTCCAACTTCTATTGATCAACTGTGAGATGGGTT
                      ____________________________________________________________
consensus             GAAGAAACATAATTGTTTGTCTAATTTTCCAACTTCTATTGATCAACTGTGAGATGGGTT