Contig 002788:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006E01Sequence388002086 (6)ref|XP_009766636.1|5e-15PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun152002788 (7)ref|XP_004238449.1|3e-11PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun
JMSF010J11Sequence346002086 (6)ref|XP_010686819.1|6e-13PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun711002788 (7)ref|XP_007018113.1|3e-65Ribophorin I isoform 1 [Theobroma cacao] ref|XP_007018114.1| Ribophorin I isofor
JMSF011J03Sequence250002788 (7)ref|XP_004500838.1|4e-08PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun599002788 (7)gb|AFK37611.1|4e-14unknown [Medicago truncatula]
JMSF022J16Sequence611002086 (6)ref|XP_004238449.1|2e-60PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun775002788 (7)ref|XP_007018113.1|6e-70Ribophorin I isoform 1 [Theobroma cacao] ref|XP_007018114.1| Ribophorin I isofor
JMSF040O03Sequence611002086 (6)ref|XP_004238449.1|1e-59PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun910002788 (7)ref|XP_009595869.1|7e-88PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun
JMSF042K03Sequence778002086 (6)ref|XP_004238449.1|2e-100PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun708002788 (7)ref|XP_011100198.1|8e-26PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun

Alignment

This contig is upended


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rJMSF040O03+             GACAAGCTCCATTGTCCAGGGTTGTTTTACCAGAAGGATCAAAAGATATTTTCTGTT
                      ____________________________________________________________
consensus                GACAAGCTCCATTGTCCAGGGTTGTTTTACCAGAAGGATCAAAAGATATTTTCTGTT
 
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rJMSF040O03+          TCTGCTCCATTTACTGTCAAAGAGTCGAAAGAGACTAAATTTTCCCATCNGGATATGATT
                      ____________________________________________________________
consensus             TCTGCTCCATTTACTGTCAAAGAGTCGAAAGAGACTAAATTTTCCCATCNGGATATGATT
 
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rJMSF010J11+                                                   TGAGCATAACCAGTACNTC
rJMSF040O03+          GGTAGACCAGTGGTTGTTTTAGAAAAGAAAAATGTAGTGCCTGAGCATAACCAGTACTTC
rJMSF022J16+                                 AAAGAAAAATGTAGTGCCTGAGCATAACCAGTACTTC
                      ____________________________________________________________
consensus             GGTAGACCAGTGGTTGTTTTAGAAAAGAAAAATGTAGTGCCTGAGCATAACCAGTACTTC
 
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rJMSF010J11+          CAGGTGTATTACAGGTTCAACAGCTTCTCACTGCTGAGGGAGCCAATGATGTTAATTTCG
rJMSF040O03+          CAGGTGTATTACAGGTTCAACAGCTTCTCACTGCTGAGGGAGCCAATGATGTTAATTTCG
rJMSF022J16+          CAGGTGTATTACAGGTTCAACAGCTTCTCACTGCTGAGGGAGCCAATGATGTTAATTTCG
                      ____________________________________________________________
consensus             CAGGTGTATTACAGGTTCAACAGCTTCTCACTGCTGAGGGAGCCAATGATGTTAATTTCG
 
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rJMSF010J11+          GGATTTTTCTTCTTCTTCCTTGCTTGCATCATTTATATGCATGCTGACTTGACAATCTCA
rJMSF040O03+          GGATTTTTCTTCTTCTTCCTTGCTTGCATCATTTATATGCATGCTGACTTGACAATCTCA
rJMSF022J16+          GGATTTTTCTTCTTCTTCCTTGCTTGCATCATTTATATGCATGCTGACTTGACAATCTCA
                      ____________________________________________________________
consensus             GGATTTTTCTTCTTCTTCCTTGCTTGCATCATTTATATGCATGCTGACTTGACAATCTCA
 
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rJMSF010J11+          AAGTCTTCTGCTTCCTATCTGGCAAAGAAACAATGGGATGAGGTGCAAACTGTTATTCAA
rJMSF040O03+          AAGTCTTCTGCTTCCTATCTGGCAAAGAAACAATGGGATGAGGTGCAAACTGTTATTCAA
rJMSF022J16+          AAGTCTTCTGCTTCCTATCTGGCAAAGAAACAATGGGATGAGGTGCAAACTGTTATTCAA
rJMSF042K03+                 CTGCTTCCTATCTGGCAAAGAAACAATGGGATGAGGTGCAAACTGTTATTCAA
                      ____________________________________________________________
consensus             AAGTCTTCTGCTTCCTATCTGGCAAAGAAACAATGGGATGAGGTGCAAACTGTTATTCAA
 
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rJMSF010J11+          CAATTCCTGAATATCATGAACCGATGCTTGACTATTCATGATAAACTAGAAGCGTCATTG
rJMSF040O03+          CAATTCCTGAATATCATGAACCGATGCTTGACTATTCATGATAAACTAGAAGCGTCATTG
rJMSF022J16+          CAATTCCTGAATATCATGAACCGATGCTTGACTATTCATGATAAACTAGAAGCGTCATTG
rJMSF042K03+          CAATTCC-GAATATCATGAACCGATGCTTGACTATTCATGATAAACTAGAAGCGTCATTG
                      ____________________________________________________________
consensus             CAATTCCTGAATATCATGAACCGATGCTTGACTATTCATGATAAACTAGAAGCGTCATTG
 
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rJMSF010J11+          CGTGATCTCTCAAGAACAGGAGATGTTCAGGCTTGCAAAGCTGCTCGGAAAGCAGCTGAT
rJMSF040O03+          CGTGATCTCTCAAGAACAGGAGATGTTCAGGCTTGCAAAGCTGCTCGGAAAGCAGCTGAT
rJMSF022J16+          CGTGATCTCTCAAGAACAGGAGATGTTCAGGCTTGCAAAGCTGCTCGGAAAGCAGCTGAT
rJMSF042K03+          CGTGATCTCTCAAGAACAGGAGATGTTCAGGCTTGCAAAGCTGCTCGGAAAGCAGCTGAT
JMSF011J03-             TGATCTCTCAAGAACAGGAGATGTTCAGGCTTGCAAAGCTGCTCGGAAAGCAGCTGAT
rJMSF011J03+            TGATCTCTCAAGAACAGGAGATGTTCAGGCTTGCAAAGCTGCTCGGAAAGCAGCTGAT
                      ____________________________________________________________
consensus             CGTGATCTCTCAAGAACAGGAGATGTTCAGGCTTGCAAAGCTGCTCGGAAAGCAGCTGAT
 
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rJMSF010J11+          GCTGTTTTGAAGGAGCTTTCTAAAGAACTGAAGCCTTTACTATCATTCTTGCAGTCTTCC
rJMSF040O03+          GCTGTTTTGAAGGAGCTTTCTAAAGAACTGAAGCCTTTACTATCATTCTTGCAGTCTTCC
rJMSF022J16+          GCTGTTTTGAAGGAGCTTTCTAAAGAACTGAAGCCTTTACTATCATTCTTGCAGTCTTCC
rJMSF042K03+          GCTGTTTTGAAGGAGCTTTCTAAAGAACTGAAGCCTTTACTATCATTCTTGCAGTCTTCC
JMSF011J03-           GCTGTTTTGAAGGAGCTTTCTAAAGAACTGAAGCCTTTACTATCATTCTTGCAGTCTTCC
rJMSF011J03+          GCTGTTTTGAAGGAGCTTTCTAAAGAACTGAAGCCTTTACTATCATTCTTGCAGTCTTCC
                      ____________________________________________________________
consensus             GCTGTTTTGAAGGAGCTTTCTAAAGAACTGAAGCCTTTACTATCATTCTTGCAGTCTTCC
 
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rJMSF010J11+          CCACAGGCTTCTCCAATCTTTCCCAAGGTTGAGGAGGTGGTCGCAAAGGAAAAAGAACTG
rJMSF040O03+          CCACAGGCTTCTCCAATCTTTCCCAAGGTTGAGGAGGTGGTCGCAAAGGAAAAAGAACTG
rJMSF022J16+          CCACAGGCTTCTCCAATCTTTCCCAAGGTTGAGGAGGTGGTCGCAAAGGAAAAAGAACTG
rJMSF042K03+          CCACAGGCTTCTCCAATCTTTCCCAAGGTTGAGGAGGTGGTCGCAAAGGAAAAAGAACTG
JMSF011J03-           CCACAGGCTTCTCCAATCTTTCCCAAGGTTGAGGAGGTGGTCGCAAAGGAAAAAGAACTG
rJMSF011J03+          CCACAGGCTTCTCCAATCTTTCCCAAGGTTGAGGAGGTGGTCGCAAAGGAAAAAGAACTG
                      ____________________________________________________________
consensus             CCACAGGCTTCTCCAATCTTTCCCAAGGTTGAGGAGGTGGTCGCAAAGGAAAAAGAACTG
 
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rJMSF010J11+          CAAGAGAAGCTCATGGCGAAGCACTCAACAGTGATCGATTGTTACGAGAAAAAGTCTGGT
rJMSF040O03+          CAAGAGAAGCTCATGGCGAAGCACTCAACAGTGATCGATTGTTACGAGAAAAAGTCTGGT
rJMSF022J16+          CAAGAGAAGCTCATGGCGAAGCACTCAACAGTGATCGATTGTTACGAGAAAAAGTCTGGT
rJMSF042K03+          CAAGAGAAGCTCATGGCGAAGCACTCAACAGTGATCGATTGTTACGAGAAAAAGTCTGGT
JMSF011J03-           CAAGAGAAGCTCATGGCGAAGCACTCAACAGTGATCGATTGTTACGAGAAAAAGTCTGGT
rJMSF006E01+                                  TCAACAGTGATCGATTGTTACGAGAAAAAGTCTGGT
rJMSF011J03+          CAAGAGAAGCTCATGGCGAAGCACTCAACAGTGATCGATTGTTACGAGAAAAAGTCTGGT
                      ____________________________________________________________
consensus             CAAGAGAAGCTCATGGCGAAGCACTCAACAGTGATCGATTGTTACGAGAAAAAGTCTGGT
 
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rJMSF010J11+          GGGGGACGAGACATTGAAATCCGTGTTGCATCAATCCAGCAAAGAATTACAGCCTTGAGG
rJMSF040O03+          GGGGGACGAGACATTGAAATCCGTGTTGCATCAATCCAGCAAAGAATTACAGCCTTGAGG
rJMSF022J16+          GGGGGACGAGACATTGAAATCCGTGTTGCATCAATCCAGCAAAGAATTACAGCCTTGAGG
rJMSF042K03+          GGGGGACGAGACATTGAAATCCGTGTTGCATCAATCCAGCAAAGAATTACAGCCTTGAGG
JMSF011J03-           GGGGGACGAG                                                  
rJMSF006E01+          GGGGGACGAGACATTGAAATCCGTGNTGCATCAATCCAGCAAAGAATTNCAGCCTTGAGG
rJMSF011J03+          GGGGGACGAGACATTGAAATCCGTGTTGCATCAATCCAGCAAAGAATTACAGCCTTGAGG
                      ____________________________________________________________
consensus             GGGGGACGAGACATTGAAATCCGTGTTGCATCAATCCAGCAAAGAATTACAGCCTTGAGG
 
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rJMSF010J11+          CAGGAAGTGGATGATCTTCTCGAAATAATTGACGAGATTTAATCTCTGCTTAGCGAACAA
rJMSF040O03+          CAGGAAGTGGATGATCTTCTCGAAATAATTGACGAGATTTAATCTCTGCTTAGCGAACAA
rJMSF022J16+          CAGGAAGTGGATGATCTTCTCGAAATAATTGACGAGATTTAATCTCTGCTTAGCGAACAA
rJMSF042K03+          CAGGAAGTGGATGATCTTCTCGAAATAATTGACGAGATTTAATCTCTGCTTAGCGAACAA
rJMSF006E01+          CAGGAAGTGGATGATCTTCTCGAAATAATTGNCGAGATNTAATCT               
rJMSF011J03+          CAGGAAGTGGATGATCTTCTCGAAATAATTGACGAGATTTAATCTCTGCTTAGCGAACAA
                      ____________________________________________________________
consensus             CAGGAAGTGGATGATCTTCTCGAAATAATTGACGAGATTTAATCTCTGCTTAGCGAACAA
 
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rJMSF010J11+          TTTTCATGAACTCGTGTTTCTTATCAAACTCTTAGCTCAAAATTTTGTTGAGATGCAAAC
rJMSF040O03+          TTTTCATGAACTCGTGTTTCTTATCAAACTCTTAGCTCAAAATTTTGTTGAGATGCAAAC
rJMSF022J16+          TTTTCATGAACTCGTGTTTCTTATCAAACTCTTAGCTCAAAATTTTGTT-AGATGCAAAC
rJMSF042K03+          TTTTCATGAACTCGTGTTTCTTATCAAACTCTTAGCTCAAAATTTTGTTGAGATGCAAAC
rJMSF011J03+          TTTTCATGAACTCGTGTTTCTTATCAAACTCTTAGCTCAAAATTTTGTTGAGATGCAAAC
                      ____________________________________________________________
consensus             TTTTCATGAACTCGTGTTTCTTATCAAACTCTTAGCTCAAAATTTTGTTGAGATGCAAAC
 
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rJMSF010J11+          AACGCCAATTAGACTTTTCCTAGCATAGTGGC                            
rJMSF040O03+          AACGCCAATTAGACTTTTCCTAGCATAGTGGCATTTCTTTGCCATGCTTATAGATGTTTT
rJMSF022J16+          AACGCCAATTAGACTTTTCCTAGCATAGTGGCATTTCTTTGCCATGCTTATAGATGTTTT
rJMSF042K03+          AACGCCAATTAGACTTTTCCTAGCATAGTGGCATTTCTTTGCCATGCTTATAGATGTTTT
rJMSF011J03+          AACGCCAATTAGACTTTTCCTAGCATAGTGGCATTTCTTTGCCATGCTTATAGATGTTTT
                      ____________________________________________________________
consensus             AACGCCAATTAGACTTTTCCTAGCATAGTGGCATTTCTTTGCCATGCTTATAGATGTTTT
 
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rJMSF040O03+          TATCTCAC                                                    
rJMSF022J16+          TATCTCAC                                                    
rJMSF042K03+          TATCTCACTGAGCTTATTCCTGAGAACTTGAATGAGTAGTTGTTAGGTTCTGAATTACGG
rJMSF011J03+          TATCTCACTGAGCTTATTCCTGAGAACTTGAATGAGTAGTTGTTAGGTTCTGAATTACGG
                      ____________________________________________________________
consensus             TATCTCACTGAGCTTATTCCTGAGAACTTGAATGAGTAGTTGTTAGGTTCTGAATTACGG
 
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rJMSF042K03+          AGTATTTTGAAGATTACTGCGGCTGAACTACTGACGTTTTATACTTTTCTTATAAT    
rJMSF011J03+          AGTATTTTGAAGATTACTGCGGCTG-ACTACTGACGTTTTATACTTTTCTTATAATGAAC
                      ____________________________________________________________
consensus             AGTATTTTGAAGATTACTGCGGCTGAACTACTGACGTTTTATACTTTTCTTATAATGAAC