Contig 002780:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004C17Sequence511002780 (5)ref|XP_009610207.1|2e-54PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Ni
JMFN031J18Sequence403002780 (5)ref|XP_009610207.1|5e-55PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Ni
JMSF010D10Sequence116002780 (5)515002780 (5)ref|XP_009610207.1|4e-53PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Ni
JMSF011C09Sequence325002780 (5)ref|XP_009610207.1|7e-43PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Ni

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN004C17+ AAACTATCCAAGGCAAATGGTGAATTGGGGATAAATGAT
                      ____________________________________________________________
consensus AAACTATCCAAGGCAAATGGTGAATTGGGGATAAATGAT
 
. : . : . : . : . : . :
JMFN004C17+ ACATACCAAAATGTTTTTTATTAAACCCTAGAAATAAATTCAGCAAACCAAGAAATTAGG
rJMSF010D10- CCCTAGAAATAAATTCAGCAAACCAAGAAATTAGG
                      ____________________________________________________________
consensus ACATACCAAAATGTTTTTTATTAAACCCTAGAAATAAATTCAGCAAACCAAGAAATTAGG
 
. : . : . : . : . : . :
JMFN004C17+ TTTTCCAAACATTCCCAAAATCATACAGAAATTAAATATCAGAGGGGACTGACCCATTGA
JMFN031J18+ CCATTGA
rJMSF010D10- TTTTCCAAACATTCCCAAAATCATACAGAAATTAAATATCAGAGGGGACTGACCCATTGA
                      ____________________________________________________________
consensus TTTTCCAAACATTCCCAAAATCATACAGAAATTAAATATCAGAGGGGACTGACCCATTGA
 
. : . : . : . : . : . :
JMFN004C17+ TTGATTGATCGAACGATCGGACACTAGGCATTGGCAGTCTTGGGGGCTAGGGGAATGGAC
JMFN031J18+ TTGATTGATCGAACGATCGGACACTAGGCATTGGCAGTCTTGGGGGCTAGGGGAATGGAC
rJMSF011C09- GGGGAATGGAC
rJMSF010D10- TTGATTGATCGAACGATCGGACACTAGGCATTGGCAGTCTTGGGGGCTAGGGGAATGGAC
                      ____________________________________________________________
consensus TTGATTGATCGAACGATCGGACACTAGGCATTGGCAGTCTTGGGGGCTAGGGGAATGGAC
 
. : . : . : . : . : . :
JMFN004C17+ TGCTGGCCGCCACTGTGTTTGATGTGGGCTGCCTCCTGCTGGCGGATCTTCTGCATCTGG
JMFN031J18+ TGCTGGCCGCCACTGTGTTTGATGTGGGCTGCCTCCTGCTGGCGGATCTTCTGCATCTGG
rJMSF011C09- TGCTGGCCGCCACTGTGTTTGATGTGNGCTGCCTCCTGCTGGCGNATCTTCTGCNTCTGG
rJMSF010D10- TGCTGGCCGCCACTGTGTTTGATGTGGGCTGCCTCCTGCTGGCGGATCTTCTGCATCTGG
                      ____________________________________________________________
consensus TGCTGGCCGCCACTGTGTTTGATGTGGGCTGCCTCCTGCTGGCGGATCTTCTGCATCTGG
 
. : . : . : . : . : . :
JMFN004C17+ AGCATCCGCTCCATAACAAGCTCGTATTCGCACTTCTCGTAGGAGTGGCGCTCGTTCTCG
JMFN031J18+ AGCATCCGCTCCATAACAAGCTCGTATTCGCACTTCTCGTAGGAGTGGCGCTCGTTCTCG
rJMSF011C09- AGCATCCGCTCCATAACAAGCTCGNATNCGCACTTCTCGTANGAGTGGCNCTCGTTCTCG
rJMSF010D10- AGCATCCGCTCCATAACAAGCTCGTATTCGCACTTCTCGTAGGAGTGGCGCTCGTTCTCG
                      ____________________________________________________________
consensus AGCATCCGCTCCATAACAAGCTCGTATTCGCACTTCTCGTAGGAGTGGCGCTCGTTCTCG
 
. : . : . : . : . : . :
JMFN004C17+ CACTTCCATGGCAGGTACATCTCGGCCTGGCGGCACTTGTTGAGAGGGATCAGCAGGTGG
JMFN031J18+ CACTTCCATGGCAGGTACATCTCGGCCTGGCGGCACTTGTTGAGAGGGATCAGCAGGTGG
rJMSF011C09- CACTTCCATGGCAGGTACATCTCGGCCTGGCGGCACTTGTTGAGAGGGATCACCANGTGG
rJMSF010D10- CACTTCCATGGCAGGTACATCTCGGCCTGGCGGCACTTGTTGAGAGGGATCAGCAGGTGG
                      ____________________________________________________________
consensus CACTTCCATGGCAGGTACATCTCGGCCTGGCGGCACTTGTTGAGAGGGATCAGCAGGTGG
 
. : . : . : . : . : . :
JMFN004C17+ GCGCATTGGTCCCTGTATCCAAGTGGCACCTTCGCCTCAACCATCTCTGCTTGCGTAGCT
JMFN031J18+ GCGCATTGGTCCCTGTATCCAAGTGGCACCTTCGCCTCAACCATCTCTGCTTGCGTAGCT
rJMSF011C09- NCGCATTGGTCCCTGTATCCAAGTGGCACCTTCGCCTCAACCATCTCTGCTTGCGTAGCT
rJMSF010D10- GCGCATTGGTCCCTGTATCCAAGTGGCACCTTCGCCTCAACCATCTCTGCTTGCGTAGCT
                      ____________________________________________________________
consensus GCGCATTGGTCCCTGTATCCAAGTGGCACCTTCGCCTCAACCATCTCTGCTTGCGTAGCT
 
. : . : . : . : . : . :
JMFN004C17+ ATCATCTTCTTCGACGACCCTGGCACCTCCATCTCTCCTCTCTCTCTCTCTC
JMFN031J18+ ATCATCTTCTTCGACGACCCTGGCACCTCCATCTCTCCTCTCTCTCTCTCTC
rJMSF011C09- ATCATCTTCTTCGACGACCCTGGCACCTCCATCTCTCCTCTCTCTCTCTCTCTCTCTCTC
JMSF010D10+ GGCACNTCCATNTCTCNTCTCTCTCTCTCTCTCTCTCTC
rJMSF010D10- ATCATCTTCTTCGACGACCCTGGCACCTCCATCTCTCCTCTCTCTCTCTCTCTCTCTCTC
                      ____________________________________________________________
consensus ATCATCTTCTTCGACGACCCTGGCACCTCCATCTCTCCTCTCTCTCTCTCTCTCTCTCTC
 
. : . : . : . : . : . :
rJMSF011C09- TCTCTCTCTCTCGA
JMSF010D10+ TCTCTCTCTCTCGATCGATCGATTACGCTACTATTCAGAGTCTCCCTAGTCCAGGCAATC
rJMSF010D10- TCTCTCTCTCTCGATCGATCGANTACGCTACTATNCAGAGTCTCCCTAGTCCAGGCAATC
                      ____________________________________________________________
consensus TCTCTCTCTCTCGATCGATCGATTACGCTACTATTCAGAGTCTCCCTAGTCCAGGCAATC