| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF009D09 | Sequence | 353 | 002336 (5) | ref|XP_006364750.1| | 8e-35 | PREDICTED: protein ZINC INDUCED FACILITATOR 1-like [Solanum tuberosum] | 762 | 002775 (5) | ref|XP_009619333.1| | 3e-97 | PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Nicotiana tomentosifor |
| JMSF013J24 | Sequence | 406 | 002336 (5) | ref|XP_006364750.1| | 8e-46 | PREDICTED: protein ZINC INDUCED FACILITATOR 1-like [Solanum tuberosum] | 654 | 002775 (5) | ref|XP_009619333.1| | 4e-72 | PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Nicotiana tomentosifor |
| JMSF026B07 | Sequence | 666 | 002336 (5) | ref|XP_004249093.1| | 5e-98 | PREDICTED: protein ZINC INDUCED FACILITATOR 1-like [Solanum lycopersicum] | 658 | 002775 (5) | ref|XP_009619333.1| | 7e-74 | PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Nicotiana tomentosifor |
| JMSF033J02 | Sequence | 692 | 002336 (5) | ref|XP_006364750.1| | 1e-73 | PREDICTED: protein ZINC INDUCED FACILITATOR 1-like [Solanum tuberosum] | 658 | 002775 (5) | ref|XP_009619333.1| | 7e-74 | PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Nicotiana tomentosifor |
| JMSF043M16 | Sequence | 772 | 002336 (5) | ref|XP_004249093.1| | 8e-123 | PREDICTED: protein ZINC INDUCED FACILITATOR 1-like [Solanum lycopersicum] | 665 | 002775 (5) | ref|XP_009619333.1| | 4e-75 | PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Nicotiana tomentosifor |
This contig is upended
. : . : . : . : . : . :
rJMSF009D09+ TATGGGCTGTCAGTCCAAGGAAGCTTGGGGGGTTGAGCTACA
____________________________________________________________
consensus TATGGGCTGTCAGTCCAAGGAAGCTTGGGGGGTTGAGCTACA
. : . : . : . : . : . :
rJMSF009D09+ CAACTGCAGATGTTGGTCAAGTTCTAGCCATTACAGGCATTGGACTTCTACTCTTTCAGC
____________________________________________________________
consensus CAACTGCAGATGTTGGTCAAGTTCTAGCCATTACAGGCATTGGACTTCTACTCTTTCAGC
. : . : . : . : . : . :
rJMSF026B07+ TTCGCTTACCCCTTGGTGGAAAAGGTTCTTGGTCCTGTCATGATATCCCGCATTGGAG
rJMSF013J24+ TTCGCTTACCCCTTGGTGGAAAAGGTTCTTGGTCCTGTCATGATATCCCGCATTGG--
rJMSF043M16+ TTCGCTTACCCCTTGGTGGAAAAGGTTCTTGGTCCTGTCATGATATCCCGCATTGGAG
rJMSF033J02+ TTCGCTTACCCCTTGGTGGAAAAGGTTCTTGGTCCTGTCATGATATCCCGCATTGGAG
rJMSF009D09+ TTTTCGCTTACCCCTTGGTGGAAAAGGTTCTTGGTCCTGTCATGATATCCCGCATTGGAG
____________________________________________________________
consensus TTTTCGCTTACCCCTTGGTGGAAAAGGTTCTTGGTCCTGTCATGATATCCCGCATTGGAG
. : . : . : . : . : . :
rJMSF026B07+ CAGCTCTTAGCATACCATTGCTGTCAACTTATCCATACATAGCTCTGCTATCTGGTCTCT
rJMSF013J24+ -AGCTCTTAGCATACCATTGCTGTCAACTTATCCATACATAGCTCTGCTATCTGGTCTCT
rJMSF043M16+ CAGCTCTTAGCATACCATTGCTGTCAACTTATCCATACATAGCTCTGCTATCTGGTCTCT
rJMSF033J02+ CAGCTCTTAGCATACCATTGCTGTCAACTTATCCATACATAGCTCTGCTATCTGGTCTCT
rJMSF009D09+ CAGCTCTTAGCATACCATTGCTGTCAACTTATCCATACATAGCTCTGCTATCTGGTCTCT
____________________________________________________________
consensus CAGCTCTTAGCATACCATTGCTGTCAACTTATCCATACATAGCTCTGCTATCTGGTCTCT
. : . : . : . : . : . :
rJMSF026B07+ GCCTCTCCGTGGTGCTTAATTGCGCCTCCATGTTAAAGAATGTGCTCTCTGTATCTATCA
rJMSF013J24+ GCCTCTCCGTGGTGCTTAATTGCGCCTCCATGTTAAAGAATGTGCTCTCTGTATCTATCA
rJMSF043M16+ GCCTCTCCGTGGTGCTTAATTGCGCCTCCATGTTAAAGAATGTGCTCTCTGTATCTATCA
rJMSF033J02+ GCCTCTCCGTGGTGCTTAATTGCGCCTCCATGTTAAAGAATGTGCTCTCTGTATCTATCA
rJMSF009D09+ GCCTCTCCGTGGTGCTTAATTGCGCCTCCATGTTAAAGAATGTGCTCTCTGTATCTATCA
____________________________________________________________
consensus GCCTCTCCGTGGTGCTTAATTGCGCCTCCATGTTAAAGAATGTGCTCTCTGTATCTATCA
. : . : . : . : . : . :
rJMSF026B07+ CTACAGGACTATTAATCCTTCAGAACAGGGCAGTTAGCCAGGAGCAGAGAGGAGCTGCCA
rJMSF013J24+ CTACAGGACTATTAATCCTTCAGAACAGGGCAGTTAGCCAGGAGCAGAGAGGAGCTGCCA
rJMSF043M16+ CTACAGGACTATTAATCCTTCAGAACAGGGCAGTTAGCCAGGAGCAGAGAGGAGCTGCCA
rJMSF033J02+ CTACAGGACTATTAATCCTTCAGAACAGGGCAGTTAGCCAGGAGCAGAGAGGAGCTGCCA
rJMSF009D09+ CTACAGGACTATTAATCCTTCAGAACAGGGCAGTTAGCCAGGAGCAGAGAGGAGCTGCCA
____________________________________________________________
consensus CTACAGGACTATTAATCCTTCAGAACAGGGCAGTTAGCCAGGAGCAGAGAGGAGCTGCCA
. : . : . : . : . : . :
rJMSF026B07+ ATGGCATTTCCATGTCTGCAATGTCTCTTTTTAAGACAATTGGCCCAGCAGCCGGGGGTT
rJMSF013J24+ ATGGCATTTCCATGTCTGCAATGTCTCTTTTTAAGACAATTGGCCCAGCAGCCGGGGGTT
rJMSF043M16+ ATGGCATTTCCATGTCTGCAATGTCTCTTTTTAAGACAATTGGCCCAGCAGCCGGGGGTT
rJMSF033J02+ ATGGCATTTCCATGTCTGCAATGTCTCTTTTTAAGACAATTGGCCCAGCAGCCGGGGGTT
rJMSF009D09+ ATGGCATTTCCATGTCTGCAATGTCTCTTTTTAAGACAATTGGCCCAGCAGCCGGGGGTT
____________________________________________________________
consensus ATGGCATTTCCATGTCTGCAATGTCTCTTTTTAAGACAATTGGCCCAGCAGCCGGGGGTT
. : . : . : . : . : . :
rJMSF026B07+ CATTATTATCATGGTCACAACTGCGTCAAGATGCAAAGTTTATGCCAGGCGATCAGCTGG
rJMSF013J24+ CATTATTATCATGGTCACAACTGCGTCAAGATGCAAAGTTTATGCCAGGCGATCAGCTGG
rJMSF043M16+ CATTATTATCATGGTCACAACTGCGTCAAGATGCAAAGTTTATGCCAGGCGATCAGCTGG
rJMSF033J02+ CATTATTATCATGGTCACAACTGCGTCAAGATGCAAAGTTTATGCCAGGCGATCAGCTGG
rJMSF009D09+ CATTATTATCATGGTCACAACTGCGTCAAGATGCAAAGTTTATGCCAGGCGATCAGCTGG
____________________________________________________________
consensus CATTATTATCATGGTCACAACTGCGTCAAGATGCAAAGTTTATGCCAGGCGATCAGCTGG
. : . : . : . : . : . :
rJMSF026B07+ TTTTCTTCGTCCTAAATGTGTTTGAGTTGCTGGGTCTGATTATGACATTCAAGCCCTTTC
rJMSF013J24+ TTTTCTTCGTCCTAAATGTGTTTGAGTTGCTGGGTCTGATTATGACATTCAAGCCCTTTC
rJMSF043M16+ TTTTCTTCGTCCTAAATGTGTTTGAGTTGCTGGGTCTGATTATGACATTCAAGCCCTTTC
rJMSF033J02+ TTTTCTTCGTCCTAAATGTGTTTGAGTTGCTGGGTCTGATTATGACATTCAAGCCCTTTC
rJMSF009D09+ TTTTCTTCGTCCTAAATGTGTTTGAGTTGCTGGGTCTGATTATGACATTCAAGCCCTTTC
____________________________________________________________
consensus TTTTCTTCGTCCTAAATGTGTTTGAGTTGCTGGGTCTGATTATGACATTCAAGCCCTTTC
. : . : . : . : . : . :
rJMSF026B07+ TCCAACTCCCCGAGGATGACATTTTAAAGTCAAAACAAGATGGGGCTGCTGAAGAGAACT
rJMSF013J24+ TCCAACTCCCCGAGGATGACATTTTAAAGTCAAAACAAGATGGGGCTGCTGAAGAGAACT
rJMSF043M16+ TCCAACTCCCCGAGGATGACATTTTAAAGTCAAAACAAGATGGGGCTGCTGAAGAGAACT
rJMSF033J02+ TCCAACTCCCCGAGGATGACATTTTAAAGTCAAAACAAGATGGGGCTGCTGAAGAGAACT
rJMSF009D09+ TCCAACTCCCCGAGGATGACATTTTAAAGTCAAAACAAGATGGGGCTGCTGAAGAGAACT
____________________________________________________________
consensus TCCAACTCCCCGAGGATGACATTTTAAAGTCAAAACAAGATGGGGCTGCTGAAGAGAACT
. : . : . : . : . : . :
rJMSF026B07+ GCATGCAACACAGAATTGCATTGCCTGAATTGCCATAGCCATGAAATACCAACTTCTTGT
rJMSF013J24+ GCATGCAACACAGAATTGCATTGCCTGAATTGCCATAGCCATGAAATACCAACTTCTTGT
rJMSF043M16+ GCATGCAACACAGAATTGCATTGCCTGAATTGCCATAGCCATGAAATACCAACTTCTTGT
rJMSF033J02+ GCATGCAACACAGAATTGCATTGCCTGAATTGCCATAGCCATGAAATACCAACTTCTTGT
rJMSF009D09+ GCATGCAACACAGAATTGCATTGCCTGAATTGCCATAGCCATGAAATACCAACTTCTTGT
____________________________________________________________
consensus GCATGCAACACAGAATTGCATTGCCTGAATTGCCATAGCCATGAAATACCAACTTCTTGT
. : . : . : . : . : . :
rJMSF026B07+ GGACTGCTTTAATATCCTGTATGACAAATTTAATTTTTTAGTACGAGAATCATGTTTTAC
rJMSF013J24+ GGACTGCTTTAATATCCTGTATGACAAATTTAATTTTTTAGTACGAGAATCATGTTTTAC
rJMSF043M16+ GGACTGCTTTAATATCCTGTATGACAAATTTAATTTTTTAGTACGAGAATCATGTTTTAC
rJMSF033J02+ GGACTGCTTTAATATCCTGTATGACAAATTTAATTTTTTAGTACGAGAATCATGTTTTAC
rJMSF009D09+ GGACTGCTTTAATATCCTGTATGACAAATTTAATTTTTTAGTACGAGAATCATGTTTTAC
____________________________________________________________
consensus GGACTGCTTTAATATCCTGTATGACAAATTTAATTTTTTAGTACGAGAATCATGTTTTAC
. : . : . : . : . : . :
rJMSF026B07+ CCACTAAATCATCCTTTTGAGTAAAATGTAGGTTACCATCTTGAACTCCAAAAAAAA
rJMSF013J24+ CCACTAAATCATCCTTTTGAGTAAAATGTAGGTTACCATCTTGAACTTCCAAAAAAA
rJMSF043M16+ CCACTAAATCATCCTTTTGAGTAAAATGTAGGTTACCATCTTGAACTTCCAAAAAAA
rJMSF033J02+ CCACTAAATCATCCTTTTGAGTAAAATGTAGGTTACCATCT
rJMSF009D09+ CCACTAAATCATCCTTTTGAGTAAAATGTAGGTTACCATCTTGAACTCCAAAAAAAAGTG
____________________________________________________________
consensus CCACTAAATCATCCTTTTGAGTAAAATGTAGGTTACCATCTTGAACTTCCAAAAAAAGTG