Contig 002763:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006K01Sequence424004879 (2)ref|XP_004247111.1|1e-35PREDICTED: CLIP-associated protein-like [Solanum lycopersicum]387002763 (2)ref|XP_011083102.1|8e-13PREDICTED: CLIP-associated protein isoform X2 [Sesamum indicum]
JMSF026K20Sequence144020001245002763 (2)

Alignment

This contig is upended


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rJMSF006K01+                                           TCGGAAAAGCATTTTTACCATACTTGC
                      ____________________________________________________________
consensus                                              TCGGAAAAGCATTTTTACCATACTTGC
 
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rJMSF006K01+          AAGGGCTCAACAGCNCNCAATTGAGGCTAGTGNCAATTTATGCNAACCGGATATCNCAGG
                      ____________________________________________________________
consensus             AAGGGCTCAACAGCNCNCAATTGAGGCTAGTGNCAATTTATGCNAACCGGATATCNCAGG
 
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rJMSF026K20+                                                            TTTTTTTTTT
rJMSF006K01+          CCCGAACNGGTACTCCCATAGATGCTACCCAAAATTNGANGAAGGNTTTGTTTTTTTTTT
                      ____________________________________________________________
consensus             CCCGAACNGGTACTCCCATAGATGCTACCCAAAATTNGANGAAGGNTTTGTTTTTTTTTT
 
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rJMSF026K20+          TCAATGTCTTGTAGGTGGAGTGAGTCGCCGCCTCTAGTGATTCATAAGGCTTCTCTCATG
rJMSF006K01+          TCAATGTCTTGTAGGTGGAGTGAGTCGCCGCCTCTAGTGATTCATAAGGCTTCTCTCATG
                      ____________________________________________________________
consensus             TCAATGTCTTGTAGGTGGAGTGAGTCGCCGCCTCTAGTGATTCATAAGGCTTCTCTCATG
 
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rJMSF026K20+          TATAGCGTGAATGTGCTGTCCTTTTCGAGTGGTAACGTTTTTTATTGGTTTTTTCTCTAA
rJMSF006K01+          TATAGCGTGAATGTGCTGTCCTTTTCGAGTGGTAACGTTTTTTATTGGTTTTTTCTCTAA
                      ____________________________________________________________
consensus             TATAGCGTGAATGTGCTGTCCTTTTCGAGTGGTAACGTTTTTTATTGGTTTTTTCTCTAA
 
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rJMSF026K20+          CGTAATTTTTATCTTTCATTTTTCAAATCAGTTAGGTTTTAAAGCAGAGTTGCAACTNTT
rJMSF006K01+          CGTAATTTTTATCTTTCATTTTTCAAATCAGTTAGGTTTTAAAGCAGAGTTGCAACTTTT
                      ____________________________________________________________
consensus             CGTAATTTTTATCTTTCATTTTTCAAATCAGTTAGGTTTTAAAGCAGAGTTGCAACTTTT
 
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rJMSF026K20+          ATGTACTCTCNTGAATTCCAAAATCGAACT                              
rJMSF006K01+          ATGTACTTTCATGAATTCCAAAATCGAACTNAACTTCGTAATCTGANGTTGAAACATGAA
                      ____________________________________________________________
consensus             ATGTACTTTCATGAATTCCAAAATCGAACTNAACTTCGTAATCTGANGTTGAAACATGAA