Contig 002761:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006B11Sequence253011905 (4)ref|XP_009376943.1|2e-25PREDICTED: probable aquaporin PIP2-8 [Pyrus x bretschneideri]137002761 (4)
JMSF024B10Sequence646006526 (5)ref|XP_009590342.1|2e-97PREDICTED: thiamine thiazole synthase, chloroplastic {ECO:0000255|HAMAP-Rule:MF_498002761 (4)gb|ADG27845.1|3e-49thiazole biosynthetic enzyme [Gossypium hirsutum]
JMSF031H23Sequence631006526 (5)ref|XP_009590342.1|1e-94PREDICTED: thiamine thiazole synthase, chloroplastic {ECO:0000255|HAMAP-Rule:MF_653002761 (4)gb|ADG27845.1|9e-100thiazole biosynthetic enzyme [Gossypium hirsutum]
JMSF041H22Sequence613002761 (4)gb|ADG27845.1|8e-79thiazole biosynthetic enzyme [Gossypium hirsutum]

Alignment

This contig is upended


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rJMSF031H23+                               ACCATCATGAGCNAGCTTCTAAGCAGGCCGAACGTGAAG
                      ____________________________________________________________
consensus                                  ACCATCATGAGCNAGCTTCTAAGCAGGCCGAACGTGAAG
 
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rJMSF031H23+          CTGTTCAACGCGGTGGCGGCGGAGGACNTGATAGTGAAGGGCGGGAGAGTGGGCGGCGTG
                      ____________________________________________________________
consensus             CTGTTCAACGCGGTGGCGGCGGAGGACNTGATAGTGAAGGGCGGGAGAGTGGGCGGCGTG
 
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rJMSF031H23+          GTCACCAACTGGGCTCTGGTGTCCATGAACCACGACACGCAGTCGTGCATGGACCCCAAC
rJMSF041H22+                     GGCTCTGGTGTCCANGAACCNCGACACGCAGTCGTGCATGGACCCCAAC
                      ____________________________________________________________
consensus             GTCACCAACTGGGCTCTGGTGTCCATGAACCACGACACGCAGTCGTGCATGGACCCCAAC
 
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rJMSF031H23+          GTGATGGAGGCCAAAGTGGTGGTCAGCTCCTGCGGCCACGACGGCCCCTTCGGGGCCACC
rJMSF041H22+          GTGATGGAGGCCAAAGTGGTGGTCAGCTCCTGCGGCCANGACGGCCCCTTNGGGNCCACC
                      ____________________________________________________________
consensus             GTGATGGAGGCCAAAGTGGTGGTCAGCTCCTGCGGCCACGACGGCCCCTTCGGGGCCACC
 
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rJMSF031H23+          GGAGTCAAGAGGCTTAAGAGCATCGGCATGATTGAAAGTGTCCCCGGGATGAAAGCTTTG
rJMSF041H22+          GGAGTCAAGAGGCTTAAGAGCATCGGCATGATTGAAAGTGTCCCCGGGATGAAAGCTTNG
                      ____________________________________________________________
consensus             GGAGTCAAGAGGCTTAAGAGCATCGGCATGATTGAAAGTGTCCCCGGGATGAAAGCTTTG
 
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rJMSF031H23+          GATATGAACACGGCGGAGGACGCAATCGTAAGGCTGACTAGAGAAATCGTGCCGGGGATG
rJMSF041H22+          GATATGAACACGGCGGAGGACGCAATCGTAAGGCTGACTAGAGAAATCGTGCCGGGGATG
                      ____________________________________________________________
consensus             GATATGAACACGGCGGAGGACGCAATCGTAAGGCTGACTAGAGAAATCGTGCCGGGGATG
 
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rJMSF031H23+          ATTGTCACCGGCATGGAGGTCGCTGAAATCGATGGAGCACCAAGAATGGGACCGACGTTT
rJMSF041H22+          ATTGTCACCGGCATGGAGGTCGCTGAAATCGATGGAGCACCAAGAATGGGACCGACGTTT
                      ____________________________________________________________
consensus             ATTGTCACCGGCATGGAGGTCGCTGAAATCGATGGAGCACCAAGAATGGGACCGACGTTT
 
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rJMSF031H23+          GGAGCGATGATGGTATCAGGGCAGAAGGCGGCGCATTTGGCACTGAAATCTCTAGGAATG
rJMSF041H22+          GGAGCGATGATGGTATCAGGGCAGAAGGCGGCGCATTTGGCACTGAAATCTCTAGGAATG
rJMSF024B10+                           AGGGCAGAAGGCGGCGCATTTGGCACTGAAATCTCTAGGAATG
rJMSF006B11+                                                     TGAAATCTCTAGGAATG
                      ____________________________________________________________
consensus             GGAGCGATGATGGTATCAGGGCAGAAGGCGGCGCATTTGGCACTGAAATCTCTAGGAATG
 
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rJMSF031H23+          GCTAATGCTATTGATGGTGATGAGGTTGGAAGCATTCACCCACAGCTCATAATGGCTGCG
rJMSF041H22+          GCTAATGCTATTGATGGTGATGAGGTTGGAAGCATTCACCCACAGCTCATAATGGCTGCG
rJMSF024B10+          GNTAATNCTATTGNNGGTGATGAGGTTGGAAGCATTCACCCACAGCTCATAATGGCTGCG
rJMSF006B11+          GCTAATGCTATTGATGGTGNTGAGGTTGGAANCATTCACCCACANCTCNTAATGGCTGCG
                      ____________________________________________________________
consensus             GCTAATGCTATTGATGGTGATGAGGTTGGAAGCATTCACCCACAGCTCATAATGGCTGCG
 
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rJMSF031H23+          GCTGATGATTC                                                 
rJMSF041H22+          GCTGATGATTC                                                 
rJMSF024B10+          GCTGATGATTC                                                 
rJMSF006B11+          GCTGATGATTCANCGGTAGTGGATGCNTAATTCACTTAGAAGAAACAGAGGGAGCAGATC
                      ____________________________________________________________
consensus             GCTGATGATTCANCGGTAGTGGATGCNTAATTCACTTAGAAGAAACAGAGGGAGCAGATC