Contig 002748:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF002F01-                                       GGGGAAACGCCAGGGAGGAAGAGGGGTCCATC
                      ____________________________________________________________
consensus                                         GGGGAAACGCCAGGGAGGAAGAGGGGTCCATC
 
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JMSF002F01-           CACGTGGGTTCATCGGTCTTTCGATCATATCAATACTTCGAATCCCATAGAGCTCTGCGC
                      ____________________________________________________________
consensus             CACGTGGGTTCATCGGTCTTTCGATCATATCAATACTTCGAATCCCATAGAGCTCTGCGC
 
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JMSF002F01-           ACCATCTCGAAGAATTTGCAGACAGAAGATCAATCGTACTGCTCGAAAACCAGATTTTGC
JMSF048E20-           ACCATCTCGAATAATTTGCAGACAGAAGATCAATCGTACTGCTCGAAAACCAGATTTTGC
                      ____________________________________________________________
consensus             ACCATCTCGAATAATTTGCAGACAGAAGATCAATCGTACTGCTCGAAAACCAGATTTTGC
 
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JMSF002F01-           AATCGGGAGCTATGGTTTCCTTCAAGCTTTTATAGGTAATGGTTTGGCGCAGAGAAATAA
JMSF048E20-           AATCGGGAGCTATGGTTTCCTTCAAGCTTTTATAGGTAATGGTTTGGCGCAGAGAAATAA
                      ____________________________________________________________
consensus             AATCGGGAGCTATGGTTTCCTTCAAGCTTTTATAGGTAATGGTTTGGCGCAGAGAAATAA
 
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JMSF002F01-           GGGGTTAAGAATCAGCAATGAAAGGCGTCTTCTCGGCGCCCGGTGATTACATCTACTTCA
JMSF048E20-           GGGGTTAAGAATCAGCAATGAAAGGCGTCTTCTCGGCGCCCGGTGATTACATCTACTTCA
                      ____________________________________________________________
consensus             GGGGTTAAGAATCAGCAATGAAAGGCGTCTTCTCGGCGCCCGGTGATTACATCTACTTCA
 
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JMSF002F01-           AGTCTCAG                                                    
JMSF048E20-           AGTCTCAGATTGGGTCGAAGCAGTGGCGCTATTATGATTTTGGCCCTAAAGTGGTTCCTC
                      ____________________________________________________________
consensus             AGTCTCAGATTGGGTCGAAGCAGTGGCGCTATTATGATTTTGGCCCTAAAGTGGTTCCTC
 
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JMSF048E20-           CACTCATCTGTCTTCCTGGCATAGCGGGAACGGCTGATGTATATTACAAGCAGATCATGT
                      ____________________________________________________________
consensus             CACTCATCTGTCTTCCTGGCATAGCGGGAACGGCTGATGTATATTACAAGCAGATCATGT
 
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JMSF048E20-           CATTGTCCATGAAGGGTTATCGCGTGATTTCTGTTGATATTGCCCGTGCATGGAACCATC
                      ____________________________________________________________
consensus             CATTGTCCATGAAGGGTTATCGCGTGATTTCTGTTGATATTGCCCGTGCATGGAACCATC
 
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JMSF048E20-           ATGAATGGGTTCAAGCATTTGAGAAGTTTCTAGATGCTATTGATGTTCACCATATACATC
                      ____________________________________________________________
consensus             ATGAATGGGTTCAAGCATTTGAGAAGTTTCTAGATGCTATTGATGTTCACCATATACATC
 
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JMSF048E20-           TATATGGTACAGCACTCGGAGGATTCTTAGCACAACTATTTGCTCAGCATCGTCCACGTC
                      ____________________________________________________________
consensus             TATATGGTACAGCACTCGGAGGATTCTTAGCACAACTATTTGCTCAGCATCGTCCACGTC
 
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JMSF048E20-           GTGTTAGGTCGTTGGTACTTTCAAACACTTTTTTGGAGACAACTAGTTTTGCTGCTGCTA
                      ____________________________________________________________
consensus             GTGTTAGGTCGTTGGTACTTTCAAACACTTTTTTGGAGACAACTAGTTTTGCTGCTGCTA
 
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JMSF048E20-           TGCCATGGGCTCCTGTTGTTGCTTGGACACCGTCTTTTCTACTGAAGCGGTATGTCCTGA
rJMSF040D13+                                                  ACTGAAGCGGTATGTCCTGA
                      ____________________________________________________________
consensus             TGCCATGGGCTCCTGTTGTTGCTTGGACACCGTCTTTTCTACTGAAGCGGTATGTCCTGA
 
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JMSF048E20-           CTGGAATCA-GGGATGTCCCGCAAGAACCTTTTATTGCAGATTCTGTGGATTTTGTTGTT
rJMSF048E20+                                                                   GTT
rJMSF040D13+          CTGGAATCAGGGGATGTCCCGCAAGAACCTTTTATTGCAGATTCTGTGGATTTTGTTGTT
                      ____________________________________________________________
consensus             CTGGAATCAGGGGATGTCCCGCAAGAACCTTTTATTGCAGATTCTGTGGATTTTGTTGTT
 
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JMSF048E20-           TCCCAGGTTGAAGCACTCGCTAAAGATGACCTGGCATCCA                    
rJMSF048E20+          TCCCAGGTTGAAGCACTCGCTAAAGATGACCTGGCATCCAGATTAACATTGACGGCAGAT
rJMSF040D13+          TCCCAGGTTGAAGCACTCGCTAAAGATGACCTGGCATCCAGATTNACATTGACGGCAGAT
                      ____________________________________________________________
consensus             TCCCAGGTTGAAGCACTCGCTAAAGATGACCTGGCATCCAGATTAACATTGACGGCAGAT
 
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rJMSF048E20+          GCTGCATCAGTTGGACCTCTTCTCCTTCCAGATTCTTCTATCACCCTTATGGATACGAAT
rJMSF040D13+          GCTGCATCAGTTGGACCTCTTCTCCTTCCAGATTCTTCTATCACCCTTATGGATACGAAT
rJMSF002F01+                                                       CTTATGGATACGAAT
                      ____________________________________________________________
consensus             GCTGCATCAGTTGGACCTCTTCTCCTTCCAGATTCTTCTATCACCCTTATGGATACGAAT
 
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rJMSF048E20+          GATTACTGTGCGACCCCACAACAGCTCAAAGATCAAGTTAGAGAAAGGTACCCCGGTGCC
rJMSF040D13+          GATTACTGTGCGACCCCACAACAGCTCAAAGATCAAGTTAGAGAAAGGTACCCCGGTGCC
rJMSF002F01+          GATTACTGTGCGACCCCACAACAGCTCAAAGATCAAGTTAGAGAAAGGTACCCCGGTGCC
                      ____________________________________________________________
consensus             GATTACTGTGCGACCCCACAACAGCTCAAAGATCAAGTTAGAGAAAGGTACCCCGGTGCC
 
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rJMSF048E20+          CGACAAGCAATCTTGAAGACTGGAGGTGATTTTCCCTTTCTTTCTCGGCCCGATGAAGTG
rJMSF040D13+          CGACAAGCAATCTTGAAGACTGGAGGTGATTTTCCCTTTCTTTCTCGGCCCGATGAAGTG
rJMSF002F01+          CGACAAGCAATCTTGAAGACTGGAGGTGATTTTCCCTTTCTTTCTCGGCCCGATGAAGTG
                      ____________________________________________________________
consensus             CGACAAGCAATCTTGAAGACTGGAGGTGATTTTCCCTTTCTTTCTCGGCCCGATGAAGTG
 
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rJMSF048E20+          AACCTTCATCTTCAGCTACACCTGAGACGAGTTGGTGTTGAGGCACGACCAGACTTGGTT
rJMSF040D13+          AACCTTCATCTTCAGCTACACNTGAGACGAGTTGGTGTTGAGGCACGACCAGACTTGGTT
rJMSF002F01+          AACCTTCATCTTCAGCTACACCTGAGACGAGTTGGTGTTGAGGCACGACCAGACTTGGTT
                      ____________________________________________________________
consensus             AACCTTCATCTTCAGCTACACCTGAGACGAGTTGGTGTTGAGGCACGACCAGACTTGGTT
 
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rJMSF048E20+          AGGAGCGTTCCCCGGGATGGCAATGGCGAAAGTTCGGATGGACCTAAAGACGAGAGAGGA
rJMSF040D13+          AGGAGCGTTCCCCGGGATGGCAATGGNGAAAGTTCGGATGGACCTAAAGACGAGAGAGGA
rJMSF002F01+          AGGAGCGTTCCCCGGGATGGCAATGGCGAAAGTTCGGATGGACCTAAAGACGAGAGAGGA
                      ____________________________________________________________
consensus             AGGAGCGTTCCCCGGGATGGCAATGGCGAAAGTTCGGATGGACCTAAAGACGAGAGAGGA
 
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rJMSF048E20+          GATTCTGATGATGGGTCAAAAGACGACGATGCTAATCACTCAGAAAGCCCTTCCCACACG
rJMSF040D13+          GATTCTGATGATGGGTCAAAAGACGACGATGCTAATCACTCAGAAAGCCCTTCCCACACG
rJMSF002F01+          GATTCTGATGATGGGTCAAAAGACGACGATGCTAATCACTCAGAAAGCCCTTCCCACACG
                      ____________________________________________________________
consensus             GATTCTGATGATGGGTCAAAAGACGACGATGCTAATCACTCAGAAAGCCCTTCCCACACG
 
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rJMSF048E20+          GACGAACCACCGTTCGCTCCGGGAGGTACCGATCCACCATTGACACCACAAGGTACGCAT
rJMSF040D13+          GACGAACCACCGTTCGCTCCGGGAGGTACCGATCCACCATTGACACCACAAGGTACGCAT
rJMSF002F01+          GACGAACCACCGTTCGCTCCGGGAGGTACCGATCCACCATTGACACCACAAGGTACGCAT
                      ____________________________________________________________
consensus             GACGAACCACCGTTCGCTCCGGGAGGTACCGATCCACCATTGACACCACAAGGTACGCAT
 
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rJMSF048E20+          TCTCATACACTAGCGAATCACTCGAGAATTTCCAAAAGCGAGCAACTTTCAAACGCGTTT
rJMSF040D13+          TCTCATACACTAGCGAATCACTCGAGAATTTCCAAAAGCGAGCAACTTTCAAACGCGTTT
rJMSF002F01+          TCTCATACACTAGCGAATCACTCGAGAATTTCCAAAAGCGAGCAACTTTCAAACGCGTTT
                      ____________________________________________________________
consensus             TCTCATACACTAGCGAATCACTCGAGAATTTCCAAAAGCGAGCAACTTTCAAACGCGTTT
 
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rJMSF048E20+          TCTGAAACCGAGCTAAACATGGCATCTCGAGTCTTGTTACACTTCATCCATCGTCTGCTT
rJMSF040D13+          TCTGAAACCGAGCTAAACATGGCATCTCGAGTCTTGTTACACTTCATCCATCGTCTGCTT
rJMSF002F01+          TCTGAAACCGAGCTAAACATGGCATCTCGAGTCTTGTTACACTTCATCCATCGTCTGCTT
                      ____________________________________________________________
consensus             TCTGAAACCGAGCTAAACATGGCATCTCGAGTCTTGTTACACTTCATCCATCGTCTGCTT
 
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rJMSF048E20+          CCCCTCTACCTCGGGGCATTTTGCGCTAATTCAAAGCATTGCTTGGAATTTAGAAACTTA
rJMSF040D13+          CCCCTCTACCTCGGGGCATTTTGCGCTAATTCAAAGCATTGCTTGGAATTTAGAAACTTA
rJMSF002F01+          CCCCTCTACCTCGGGGCATTTTGCGCTAATTCAAAGCATTGCTTGGAATTTAGAAACTTA
                      ____________________________________________________________
consensus             CCCCTCTACCTCGGGGCATTTTGCGCTAATTCAAAGCATTGCTTGGAATTTAGAAACTTA
 
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rJMSF048E20+          GTATAGAGGAATTTCTTTGTAAATTATGGTTTTTTTTGTAGACACCA             
rJMSF040D13+          GTATAGAGGAATTTCTTTGTAAATTATGGTTTTTTTTGTAGACACCAGAAATGGAAATTG
rJMSF002F01+          GTATAGAGGAATTTCTTTGTAAATTATGGTTTTTTTTGTAGACACCAGAAATGGAAATTG
                      ____________________________________________________________
consensus             GTATAGAGGAATTTCTTTGTAAATTATGGTTTTTTTTGTAGACACCAGAAATGGAAATTG
 
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rJMSF040D13+          AATGCTTGAGTTTGTGGTGGAAAGGT                                  
rJMSF002F01+          AATGCTTGAGTTTGTGGTGGAAAGGTTCTTTTTAGTTGAGACAGCTATGCAATGTATCTG
                      ____________________________________________________________
consensus             AATGCTTGAGTTTGTGGTGGAAAGGTTCTTTTTAGTTGAGACAGCTATGCAATGTATCTG