Contig 002745:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002B15Sequence219003785 (6)emb|CDO99158.1|2e-08unnamed protein product [Coffea canephora]757002745 (2)ref|XP_007034963.1|1e-09Magnesium transporter MRS2-2 isoform 1 [Theobroma cacao] gb|EOY05889.1| Magnesiu
JMSF003B15Sequence200003785 (6)emb|CDO99158.1|3e-04unnamed protein product [Coffea canephora]659002745 (2)ref|XP_007034963.1|2e-09Magnesium transporter MRS2-2 isoform 1 [Theobroma cacao] gb|EOY05889.1| Magnesiu

Alignment

This contig is upended


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rJMSF002B15+                                 CTCAGTCTTGACTTTGCTAAGAGAGTAAGTAATACTA
                      ____________________________________________________________
consensus                                    CTCAGTCTTGACTTTGCTAAGAGAGTAAGTAATACTA
 
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rJMSF002B15+          GATTGCTTTAATTGAACTTATATAGTTTAAAAAATCATTATTTTGGTTTAATCTTTTTTC
                      ____________________________________________________________
consensus             GATTGCTTTAATTGAACTTATATAGTTTAAAAAATCATTATTTTGGTTTAATCTTTTTTC
 
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rJMSF003B15+             CTTTAATTTGGAAAAAAAACATTTTTTGTCACTTCGTTCCCATGCTATCATGCGAAT
rJMSF002B15+          TTTCTTTAATTTGGAAAAAAAACATTTTTTGTCACTTCGTTCCCATGCTATCATGCGAAT
                      ____________________________________________________________
consensus             TTTCTTTAATTTGGAAAAAAAACATTTTTTGTCACTTCGTTCCCATGCTATCATGCGAAT
 
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rJMSF003B15+          CATCCCTTGTTTCAAATCATTGCAAAATTGGTCCCTCGGCACGAACATGAAATCCTAGTG
rJMSF002B15+          CATCCCTTGTTTCAAATCATTGCAAAATTGGTCCCTCGGCACGAACATGAAATCCTAGTG
                      ____________________________________________________________
consensus             CATCCCTTGTTTCAAATCATTGCAAAATTGGTCCCTCGGCACGAACATGAAATCCTAGTG
 
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rJMSF003B15+          AGAGACCAATATGGTGACAACTGAGTGATCAATTTGGCAATGACGTGGAATAATTAGGAA
rJMSF002B15+          AGAGACCAATATGGTGACAACTGAGTGATCAATTTGGCAATGACGTGGAATAATTAGGAA
                      ____________________________________________________________
consensus             AGAGACCAATATGGTGACAACTGAGTGATCAATTTGGCAATGACGTGGAATAATTAGGAA
 
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rJMSF003B15+          TGATATTTGTGTTTGTGTGATAGTGAGGCACTAAATTGACTAGTAACCAATAATTGAAGG
rJMSF002B15+          TGATATTTGTGTTTGTGTGATAGTGAGGCACTAAATTGACTAGTAACCAATAATTGAAGG
                      ____________________________________________________________
consensus             TGATATTTGTGTTTGTGTGATAGTGAGGCACTAAATTGACTAGTAACCAATAATTGAAGG
 
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rJMSF003B15+          ACCCAAATGCTTTTTTAAGTTTTTTGATGGCTTACAGGAGACCTCATTCATCACTACTAG
rJMSF002B15+          ACCCAAATGCTTTTTTAAGTTTTTTGATGGCTTACAGGAGACCTCATTCATCACTACTAG
                      ____________________________________________________________
consensus             ACCCAAATGCTTTTTTAAGTTTTTTGATGGCTTACAGGAGACCTCATTCATCACTACTAG
 
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rJMSF003B15+          TTTTGTTCTCTGCTNGATTGTAGGTGAGGGATGAACTTGAACAACTCTTGGATGATGATG
rJMSF002B15+          TTTTGTTCTCTGCTTGATTGTAGGTGAGGGATGAACTTGAACAACTCTTGGATGATGATG
                      ____________________________________________________________
consensus             TTTTGTTCTCTGCTTGATTGTAGGTGAGGGATGAACTTGAACAACTCTTGGATGATGATG
 
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rJMSF003B15+          ATGATATGGCTGACCTTTATTTGTCTAGAAAATTAGCTGGCGCATCTTCACCTGCAAGTG
rJMSF002B15+          ATGATATGGCTGACCTTTATTTGTCTAGAAAATTAGCTGGCGCATCTTCACCTGCAAGTG
                      ____________________________________________________________
consensus             ATGATATGGCTGACCTTTATTTGTCTAGAAAATTAGCTGGCGCATCTTCACCTGCAAGTG
 
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rJMSF003B15+          CATCAGCCAGTTGGTTTCTCGCTTCACCTACAATTGGCTCAAAGATATCTAGAGCGAGTA
rJMSF002B15+          CATCAGCCAGTTGGTTTCTCGCTTCACCTACAATTGGCTCAAAGATATCTAGAGCGAGTA
                      ____________________________________________________________
consensus             CATCAGCCAGTTGGTTTCTCGCTTCACCTACAATTGGCTCAAAGATATCTAGAGCGAGTA
 
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rJMSF003B15+          GGGCAAGTGTAGCAACTGTCCGAGGGGATGAGAATGATGTTGAAGACCNTGAGATGTTAC
rJMSF002B15+          GGGCAAGTGTAGCAACTGTCCGAGGGGATGAGAATGATGTTGAAGACCTTGAGATGTTAC
                      ____________________________________________________________
consensus             GGGCAAGTGTAGCAACTGTCCGAGGGGATGAGAATGATGTTGAAGACCTTGAGATGTTAC
 
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rJMSF003B15+          TAGAGG                                                      
rJMSF002B15+          TAGAGGTAAGGATTCTAATTTCTAAATGTTTAAGTTAGGTTTCATTTTGTTCTAAATGTT
                      ____________________________________________________________
consensus             TAGAGGTAAGGATTCTAATTTCTAAATGTTTAAGTTAGGTTTCATTTTGTTCTAAATGTT
 
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rJMSF002B15+          TCAATAGTTTCAATTTGTTCTTGAATGTAAATCCCAATATCTTAGTTATGTACAATTTTT
                      ____________________________________________________________
consensus             TCAATAGTTTCAATTTGTTCTTGAATGTAAATCCCAATATCTTAGTTATGTACAATTTTT