Contig 002740:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002A21Sequence356006111 (3)ref|XP_009620720.1|2e-24PREDICTED: beta-amyrin 28-oxidase-like [Nicotiana tomentosiformis]420002740 (6)ref|XP_006353629.1|7e-37PREDICTED: cytochrome P450 716B2-like [Solanum tuberosum]
JMFF020F22Sequence535006111 (3)ref|XP_006353629.1|2e-63PREDICTED: cytochrome P450 716B2-like [Solanum tuberosum]677002740 (6)ref|XP_006353629.1|6e-96PREDICTED: cytochrome P450 716B2-like [Solanum tuberosum]
JMFF051P02Sequence596006111 (3)ref|XP_006353629.1|7e-57PREDICTED: cytochrome P450 716B2-like [Solanum tuberosum]503002740 (6)ref|XP_006353629.1|4e-49PREDICTED: cytochrome P450 716B2-like [Solanum tuberosum]
JMFN040F12Sequence517002740 (6)ref|XP_006353629.1|7e-92PREDICTED: cytochrome P450 716B2-like [Solanum tuberosum]
JMSF015H09Sequence583002740 (6)ref|XP_004241821.1|1e-76PREDICTED: beta-amyrin 28-oxidase-like [Solanum lycopersicum]783002740 (6)ref|XP_006353629.1|5e-116PREDICTED: cytochrome P450 716B2-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF015H09-                                                      GGTTCTTGAGCATTGAG
                      ____________________________________________________________
consensus                                                        GGTTCTTGAGCATTGAG
 
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JMSF015H09-           GACCGCGACGAGGTTAAAAGGTTGTTAGACCCAATAATCCTCGTTAGCACAGGCATGTTC
                      ____________________________________________________________
consensus             GACCGCGACGAGGTTAAAAGGTTGTTAGACCCAATAATCCTCGTTAGCACAGGCATGTTC
 
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JMSF015H09-           AGCCTGCCACTCAACTTCCCCGGCACGGCCTACAATCGCGCCATGAAAGGCGGTAGCATG
                      ____________________________________________________________
consensus             AGCCTGCCACTCAACTTCCCCGGCACGGCCTACAATCGCGCCATGAAAGGCGGTAGCATG
 
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JMSF015H09-           GTGCGCCGTCAGCTCGTGGAGGTGATTAAGGAGAGGAAGGCAAAGGCGATGATGAATAGT
                      ____________________________________________________________
consensus             GTGCGCCGTCAGCTCGTGGAGGTGATTAAGGAGAGGAAGGCAAAGGCGATGATGAATAGT
 
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JMSF015H09-           TTAGGTAAGGTGGAGGATGAGGGGCGAGACGTGTTGGGTCGCCTCCTTAGCGTCACCGAT
rJMSF015H09+                                                            CGTCACCGAT
                      ____________________________________________________________
consensus             TTAGGTAAGGTGGAGGATGAGGGGCGAGACGTGTTGGGTCGCCTCCTTAGCGTCACCGAT
 
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JMSF015H09-           GAGGAGGGACAACACTTGAACGAGTTCGAGATTTACCATTATATTATCGGAATTCTCCTC
rJMSF015H09+          GAGGAGGGACAACACTTGAACGAGNTCGAGATTTACCATTATATTATCGGAATTCTCCTC
                      ____________________________________________________________
consensus             GAGGAGGGACAACACTTGAACGAGTTCGAGATTTACCATTATATTATCGGAATTCTCCTC
 
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JMSF015H09-           CCCACCTACCATTCTATCAGTGCCGCCATAACCTTTGTATTGAAGTTTCTTGCTGAACTT
JMFN040F12-                                GCCGCCATAACCTTTGTATTGAAGTTTCTTGCTGAACTT
rJMSF015H09+          CCCACCTACCATTCTATCAGTGCCGCCATAACCTTTGTATTGAAGTTTCTTGCTGAACTT
rJMFF020F22+                                                                   CTT
                      ____________________________________________________________
consensus             CCCACCTACCATTCTATCAGTGCCGCCATAACCTTTGTATTGAAGTTTCTTGCTGAACTT
 
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JMSF015H09-           CCCCATATTTATCAACAAGTCTACAAAGAACAAATTGAAATTGCCAAGTCGAAGGGACCA
JMFN040F12-           CCCCATATTTATCAACAAGCCTACAAAGAACAAATTGAAATTGCCAAGTCCACCGNNCCA
rJMSF015H09+          CCCCATATTTATCAACAAGTCTACAAAGAACAAATTGAAATTGCCAAGTCGAAGGGACCA
rJMFF020F22+          CCCCATATTTATCAACAAGTCTACAAAGAACAAATTGAAATTGCCAAGTCGAAGGGACCA
                      ____________________________________________________________
consensus             CCCCATATTTATCAACAAGTCTACAAAGAACAAATTGAAATTGCCAAGTCGAAGGGACCA
 
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JMSF015H09-           AATGAGAGATTAAGTTGGGAAGACATTCAAAAGATGAAATATTCATGGAATGTGGCATGT
JMFN040F12-           AATGAGAGATTAAGTTGGGAAGACATTCAAAAGATGAAATATTCATGGAATGTGGCATGT
rJMSF015H09+          AATGAGAGATTAAGTTGGGAAGACATTCAAAAGATGAAATATTCATGGAATGTGGCATGT
rJMFF020F22+          AATGAGAGATTAAGTTGGGAAGACATTCAAAAGATGAAATATTCATGGAATGTGGCATGT
                      ____________________________________________________________
consensus             AATGAGAGATTAAGTTGGGAAGACATTCAAAAGATGAAATATTCATGGAATGTGGCATGT
 
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JMSF015H09-           GAAGCACTAAGGCTATTCCCACCAGGACAAGGTGGCTTTAGAGAGACTGTCACTGATTTT
JMFN040F12-           GAAGCACTAAGGCTATTCCCACCAGGACAAGGTGGCTTTAGAGAGACTGTCACTGATTTT
rJMSF015H09+          GAAGCACTAAGGCTATTCCCACCAGGACAAGGTGGCTTTAGAGAGACTGTCACTGATTTT
rJMFF020F22+          GAAGCACTAAGGCTATTCCCACCAGGACAAGGTGGCTTTAGAGAGACTGTCACTGATTTT
                      ____________________________________________________________
consensus             GAAGCACTAAGGCTATTCCCACCAGGACAAGGTGGCTTTAGAGAGACTGTCACTGATTTT
 
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JMSF015H09-           ACCTACGCTGGATTTACTATCCCAAA                                  
JMFN040F12-           ACCTACGCTGGATTTACTATCCCAAAAGGATGGAAGACATTTTGGAATGTGTATTCAACA
rJMFF002A21+                           TATCCCAAAAGGATGGAAGACATTTTGGAATGTGTATTCNACN
rJMSF015H09+          ACCTACGCTGGATTTACTATCCCAAAAGGATGGAAGACATTTTGGAATGTGTATTCAACA
rJMFF020F22+          ACCTACGCTGGATTTACTATCCCAAAAGGATGGAAGACATTTTGGAATGTGTATTCAACA
rJMFF051P02+                                               CATTTTGGAATGTGTATTCAACA
                      ____________________________________________________________
consensus             ACCTACGCTGGATTTACTATCCCAAAAGGATGGAAGACATTTTGGAATGTGTATTCAACA
 
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JMFN040F12-           CACAAGAATCCCAAATATTTCTCAGAACCAGATAAATTTGATCCATCCAGGTACGAGGGA
rJMFF002A21+          CACAAGAATCCCAAATATTTCTCAGANCCAGATAAATTTGATCCATNGAGGTNNGAGGGA
rJMSF015H09+          CACAAGAATCCCAAATATTTCTCAGAACCAGATAAATTTGATCCATCGAGGTACGAGGGA
rJMFF020F22+          CACAAGAATCCCAAATATTTCTCAGAACCAGATAAATTTGATCCATCGAGGTACGAGGGA
rJMFF051P02+          CACAAGAATCCCAAATATTTCTCAGAACCAGATAAATTTGATCCATCGAGGTACGAGGGA
                      ____________________________________________________________
consensus             CACAAGAATCCCAAATATTTCTCAGAACCAGATAAATTTGATCCATCGAGGTACGAGGGA
 
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JMFN040F12-           AATGGGCCGGCACCCTTCACCTTTGTGCCATTTGGCGGTGGGCCGAGAATGTGTCCCGGA
rJMFF002A21+          AATGGGCCGGCACCCTTCACCTTTGTGCCATTTGG-NTTGGNCCGAGAATGTGTCCCGGA
rJMSF015H09+          AATGGGCCGGCACCCTTCACCTTTGTGCCATTTGGCGGTGGGCCGAGAATGTGTCCCGGA
rJMFF020F22+          AATGGGCCGGCACCCTTCACCTTTGTGCCATTTGGCGGTGGGCCGAGAATGTGTCCCGGA
rJMFF051P02+          AATGGGCCGGCACCCTTCACCTTTGTGCCATTTGGCGGTGGGCCGAGAATGTGTCCCGGA
                      ____________________________________________________________
consensus             AATGGGCCGGCACCCTTCACCTTTGTGCCATTTGGCGGTGGGCCGAGAATGTGTCCCGGA
 
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JMFN040F12-           AAAGAGTACGCCCGGCTAAAAGTACTTGTGTTCATGCACAACGTTGTCACCAACTTCAAA
rJMFF002A21+          AAAGAGTACGCCCGGNTAGAAGTACTTGTGTTCATGCACAACGTTGTCACCNANTTCAAA
rJMSF015H09+          AAAGAGTACGCCCGGCTAGAAGTACTTGTGTTCATGCACAACGTTGTCACCAACTTCAAA
rJMFF020F22+          AAAGAGTACGCCCGGCTAGAAGTACTTGTGTTCATGCACAACGTTGTCACCAACTTCAAA
rJMFF051P02+          AAAGAGTACGCCCGGCTAGAAGTACTTGTGTTCATGCACAACGTTGTCACCAACTTCAAA
                      ____________________________________________________________
consensus             AAAGAGTACGCCCGGCTAGAAGTACTTGTGTTCATGCACAACGTTGTCACCAACTTCAAA
 
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JMFN040F12-           ATGGAGAAACTATTGCCGAATGAGAAGATAGTCTATAATAG                   
rJMFF002A21+          ATGGAGAAACTAGTGCNGAATGAGAAGATAGTCTATAATAGTGCATCGCCAATTCCAGTC
rJMSF015H09+          ATGGAGAAACTAGTGCCGAATGAGAAGATAGTCTATAATAGTGCATCGCCAATTCCAGTC
rJMFF020F22+          ATGGAGAAACTAGTGCCGAATGAGAAGATAGTCTATAATAGTGCATCGCCAATTCCAGTC
rJMFF051P02+          ATGGAGAATCTAGTGCCGAATGAGAAGATAGTCTATAATAGTGCATCGCCAATTCCAGTC
                      ____________________________________________________________
consensus             ATGGAGAAACTAGTGCCGAATGAGAAGATAGTCTATAATAGTGCATCGCCAATTCCAGTC
 
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rJMFF002A21+          AATGGCCTTCCTGTCAGACTTACACCCCATCAGAANTAACTTNTNGTTGCANTGCAATGA
rJMSF015H09+          AATGGCCTTCCTGTCAGACTTACACCCCATCAGAACTAACTTTTTGTTGCACTGCAATGA
rJMFF020F22+          AATGGCCTTCCTGTCAGACTTACACCCCATCAGAACTAACTTTTTGTTGCACTGCAATGA
rJMFF051P02+          AATGGCCTTCCTGTCAGACTTACACCCCATCAGAACTAACTTTTTGTTGCACTGCAATGA
                      ____________________________________________________________
consensus             AATGGCCTTCCTGTCAGACTTACACCCCATCAGAACTAACTTTTTGTTGCACTGCAATGA
 
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rJMFF002A21+          CGTTAAGAGTCAATGATGTTAGNGNNTAATTGAAATAAATTTGTGTTGGTAAGTTGTATT
rJMSF015H09+          CGTTAAGAGTCAATGATGTTAGTGCTTAATTGAAATAAATTTGTGTTGGTAAGTTGTATT
rJMFF020F22+          CGTTAAGAGTCAATGATGTTAGTGCTTAATTGAAATAAATTTGTGTTGGTAAGTTGTATT
rJMFF051P02+          CGTTAAGAGTCAATGATGTTAGTGCTTAATTGAAATAAATTTGTGTTGGTAAGTTGTATT
                      ____________________________________________________________
consensus             CGTTAAGAGTCAATGATGTTAGTGCTTAATTGAAATAAATTTGTGTTGGTAAGTTGTATT
 
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rJMFF002A21+          AAGTGTTTATTATNTGTG                                          
rJMSF015H09+          AAGTGTTTATTATTTGTGTTATTTGTATTTGACAATAATAATGT                
rJMFF020F22+          AAGTGTTTATTATTTGTGTTATTTGTATTTGACAATAATAATGTTACCCGAACCGTATT 
rJMFF051P02+          AAGTGTTTATTATTTGTGTTATTTGTATTTGACAATAATAATGTTACCCGAACCGTATTT
                      ____________________________________________________________
consensus             AAGTGTTTATTATTTGTGTTATTTGTATTTGACAATAATAATGTTACCCGAACCGTATTT
 
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rJMFF051P02+          GTAAAGAAGTAGTTTGTATTGCTGAGTTCTAAGTAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             GTAAAGAAGTAGTTTGTATTGCTGAGTTCTAAGTAAAAAAAAAAAAAAACTCTCCAGGGT